RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 STAG2Q8N3U4 1231 aa23.38■■□□□ 1.33
SMG8-203ENST00000578922 RNF26Q9BY78 433 aaPredicted RBP23.38■■□□□ 1.33
SMG8-203ENST00000578922 TMOD2Q9NZR1 351 aa23.38■■□□□ 1.33
SMG8-203ENST00000578922 GNL2Q13823 731 aaKnown RBP23.38■■□□□ 1.33
SMG8-203ENST00000578922 LEO1Q8WVC0 666 aaPredicted RBP23.38■■□□□ 1.33
SMG8-203ENST00000578922 SCAND2PQ9GZW5 306 aaPredicted RBP23.38■■□□□ 1.33
SMG8-203ENST00000578922 PI4KBQ9UBF8 816 aa23.38■■□□□ 1.33
SMG8-203ENST00000578922 MYH8P13535 1937 aa23.37■■□□□ 1.33
SMG8-203ENST00000578922 USP28Q96RU2 1077 aa23.37■■□□□ 1.33
SMG8-203ENST00000578922 TRIM34Q9BYJ4 488 aa23.37■■□□□ 1.33
SMG8-203ENST00000578922 VEZTQ9HBM0 779 aa23.37■■□□□ 1.33
SMG8-203ENST00000578922 ZNF70Q9UC06 446 aaPredicted RBP23.37■■□□□ 1.33
SMG8-203ENST00000578922 GOLGA8HP0CJ92 632 aa23.37■■□□□ 1.33
SMG8-203ENST00000578922 KIF5BP33176 963 aa23.37■■□□□ 1.33
SMG8-203ENST00000578922 SHROOM1Q2M3G4 852 aaPredicted RBP23.37■■□□□ 1.33
SMG8-203ENST00000578922 EHD4Q9H223 541 aa23.37■■□□□ 1.33
SMG8-203ENST00000578922 CNTNAP5Q8WYK1 1306 aa23.36■■□□□ 1.33
SMG8-203ENST00000578922 PTMAP06454 111 aaKnown RBP23.36■■□□□ 1.33
SMG8-203ENST00000578922 PKN1Q16512 942 aa23.36■■□□□ 1.33
SMG8-203ENST00000578922 CFAP45Q9UL16 551 aa23.36■■□□□ 1.33
SMG8-203ENST00000578922 PRPF3O43395 683 aaKnown RBP23.35■■□□□ 1.33
SMG8-203ENST00000578922 GRM4Q14833 912 aa23.35■■□□□ 1.33
SMG8-203ENST00000578922 FHDC1Q9C0D6 1143 aaPredicted RBP23.35■■□□□ 1.33
SMG8-203ENST00000578922 MTMR4Q9NYA4 1195 aa23.35■■□□□ 1.33
SMG8-203ENST00000578922 VPS54Q9P1Q0 977 aa23.35■■□□□ 1.33
SMG8-203ENST00000578922 MAD2L2Q9UI95 211 aa23.35■■□□□ 1.33
SMG8-203ENST00000578922 GJA3Q9Y6H8 435 aa23.35■■□□□ 1.33
SMG8-203ENST00000578922 ENTPD3O75355 529 aa23.35■■□□□ 1.33
SMG8-203ENST00000578922 TOP1P11387 765 aaKnown RBP23.35■■□□□ 1.33
SMG8-203ENST00000578922 ATP2B2Q01814 1243 aa23.35■■□□□ 1.33
SMG8-203ENST00000578922 TNIP1Q15025 636 aa23.35■■□□□ 1.33
SMG8-203ENST00000578922 RBM26Q5T8P6 1007 aaKnown RBP23.35■■□□□ 1.33
SMG8-203ENST00000578922 LRRC47Q8N1G4 583 aaKnown RBP23.35■■□□□ 1.33
SMG8-203ENST00000578922 SIPA1L1O43166 1804 aa23.35■■□□□ 1.33
SMG8-203ENST00000578922 MYH6P13533 1939 aa23.35■■□□□ 1.33
SMG8-203ENST00000578922 NPM3O75607 178 aaKnown RBP23.34■■□□□ 1.33
SMG8-203ENST00000578922 SHISA4Q96DD7 197 aa23.34■■□□□ 1.33
SMG8-203ENST00000578922 ZNF396Q96N95 335 aaPredicted RBP23.34■■□□□ 1.33
SMG8-203ENST00000578922 CSRNP1Q96S65 589 aa23.34■■□□□ 1.33
SMG8-203ENST00000578922 CLIP2Q9UDT6 1046 aa23.34■■□□□ 1.33
SMG8-203ENST00000578922 SCAF8Q9UPN6 1271 aaKnown RBP23.34■■□□□ 1.33
SMG8-203ENST00000578922 MYH15Q9Y2K3 1946 aa23.34■■□□□ 1.33
SMG8-203ENST00000578922 NBPF9Q3BBW0 867 aa23.34■■□□□ 1.33
SMG8-203ENST00000578922 BRAPQ7Z569 592 aa23.34■■□□□ 1.33
SMG8-203ENST00000578922 CPVLQ9H3G5 476 aa23.34■■□□□ 1.33
SMG8-203ENST00000578922 PLIN4Q96Q06 1357 aa23.34■■□□□ 1.33
SMG8-203ENST00000578922 MMP1P03956 469 aa23.33■■□□□ 1.33
SMG8-203ENST00000578922 MYSM1Q5VVJ2 828 aa23.33■■□□□ 1.33
SMG8-203ENST00000578922 USP17L2Q6R6M4 530 aa23.33■■□□□ 1.33
SMG8-203ENST00000578922 LTBP3Q9NS15 1303 aa23.33■■□□□ 1.33
SMG8-203ENST00000578922 IGKV6D-41A0A0C4DH26 115 aa23.33■■□□□ 1.32
SMG8-203ENST00000578922 BTBD18B2RXH4 712 aa23.33■■□□□ 1.32
SMG8-203ENST00000578922 VEGFAP15692 232 aaPredicted RBP23.33■■□□□ 1.32
SMG8-203ENST00000578922 SPDYE2Q495Y8 402 aa23.33■■□□□ 1.32
SMG8-203ENST00000578922 CERKLQ49MI3 558 aaPredicted RBP23.33■■□□□ 1.32
SMG8-203ENST00000578922 ARHGAP27Q6ZUM4 889 aa23.33■■□□□ 1.32
SMG8-203ENST00000578922 DIS3L2Q8IYB7 885 aaKnown RBP23.33■■□□□ 1.32
SMG8-203ENST00000578922 MYOZ2Q9NPC6 264 aa23.33■■□□□ 1.32
SMG8-203ENST00000578922 ELP1O95163 1332 aa23.33■■□□□ 1.32
SMG8-203ENST00000578922 GDF11O95390 407 aa23.32■■□□□ 1.32
SMG8-203ENST00000578922 EGFRP00533 1210 aa23.32■■□□□ 1.32
SMG8-203ENST00000578922 CLIC4Q9Y696 253 aa23.32■■□□□ 1.32
SMG8-203ENST00000578922 GOLGA6L4A6NEF3 574 aa23.31■■□□□ 1.32
SMG8-203ENST00000578922 SAFBQ15424 915 aaKnown RBP eCLIP23.31■■□□□ 1.32
SMG8-203ENST00000578922 FOXP4Q8IVH2 680 aaPredicted RBP23.31■■□□□ 1.32
SMG8-203ENST00000578922 MAP3K14Q99558 947 aa23.31■■□□□ 1.32
SMG8-203ENST00000578922 FUCA2Q9BTY2 467 aa23.31■■□□□ 1.32
SMG8-203ENST00000578922 USP17L5A8MUK1 530 aa23.31■■□□□ 1.32
SMG8-203ENST00000578922 WNT10BO00744 389 aa23.31■■□□□ 1.32
SMG8-203ENST00000578922 NOVP48745 357 aa23.31■■□□□ 1.32
SMG8-203ENST00000578922 GMPSP49915 693 aaPredicted RBP23.31■■□□□ 1.32
SMG8-203ENST00000578922 SLC35G1Q2M3R5 365 aa23.31■■□□□ 1.32
SMG8-203ENST00000578922 CDAN1Q8IWY9 1227 aa23.31■■□□□ 1.32
SMG8-203ENST00000578922 OXER1Q8TDS5 423 aa23.31■■□□□ 1.32
SMG8-203ENST00000578922 R3HCC1Q9Y3T6 440 aaKnown RBP23.31■■□□□ 1.32
SMG8-203ENST00000578922 ATRNL1Q5VV63 1379 aa23.3■■□□□ 1.32
SMG8-203ENST00000578922 TTLL1O95922 423 aa23.3■■□□□ 1.32
SMG8-203ENST00000578922 PARP1P09874 1014 aaKnown RBP23.3■■□□□ 1.32
SMG8-203ENST00000578922 NR5A1Q13285 461 aa23.3■■□□□ 1.32
SMG8-203ENST00000578922 GLIPR1L2Q4G1C9 344 aa23.3■■□□□ 1.32
SMG8-203ENST00000578922 PGBD1Q96JS3 809 aa23.3■■□□□ 1.32
SMG8-203ENST00000578922 TMEM39BQ9GZU3 492 aa23.3■■□□□ 1.32
SMG8-203ENST00000578922 CNTNAP1P78357 1384 aa23.3■■□□□ 1.32
SMG8-203ENST00000578922 FRMPD2Q68DX3 1309 aaPredicted RBP23.3■■□□□ 1.32
SMG8-203ENST00000578922 PALM3A6NDB9 673 aaPredicted RBP23.3■■□□□ 1.32
SMG8-203ENST00000578922 KLRF2D3W0D1 207 aa23.3■■□□□ 1.32
SMG8-203ENST00000578922 MYO1BO43795 1136 aa23.3■■□□□ 1.32
SMG8-203ENST00000578922 RGS22Q8NE09 1264 aa23.3■■□□□ 1.32
SMG8-203ENST00000578922 CCDC17Q96LX7 622 aa23.3■■□□□ 1.32
SMG8-203ENST00000578922 ARFGEF1Q9Y6D6 1849 aa23.29■■□□□ 1.32
SMG8-203ENST00000578922 ZNF541Q9H0D2 1346 aa23.29■■□□□ 1.32
SMG8-203ENST00000578922 FZD9O00144 591 aa23.29■■□□□ 1.32
SMG8-203ENST00000578922 XBP1P17861 261 aa23.29■■□□□ 1.32
SMG8-203ENST00000578922 U2AF2P26368 475 aaKnown RBP eCLIP23.29■■□□□ 1.32
SMG8-203ENST00000578922 GNAQP50148 359 aa23.29■■□□□ 1.32
SMG8-203ENST00000578922 MTMR14Q8NCE2 650 aa23.29■■□□□ 1.32
SMG8-203ENST00000578922 FAM151AQ8WW52 585 aa23.29■■□□□ 1.32
SMG8-203ENST00000578922 RCOR1Q9UKL0 485 aa23.29■■□□□ 1.32
SMG8-203ENST00000578922 CYTH3O43739 400 aa23.28■■□□□ 1.32
SMG8-203ENST00000578922 SCG2P13521 617 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms