RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 MYH7P12883 1935 aa10.8□□□□□ -0.68
GGA3-207ENST00000578896 ZNFX1Q9P2E3 1918 aaKnown RBP10.8□□□□□ -0.68
GGA3-207ENST00000578896 ATP5JP18859 108 aa10.79□□□□□ -0.68
GGA3-207ENST00000578896 PTPREP23469 700 aa10.79□□□□□ -0.68
GGA3-207ENST00000578896 TSHZ3Q63HK5 1081 aa10.79□□□□□ -0.68
GGA3-207ENST00000578896 ANKLE1Q8NAG6 615 aa10.79□□□□□ -0.68
GGA3-207ENST00000578896 GTF3C2Q8WUA4 911 aaPredicted RBP10.79□□□□□ -0.68
GGA3-207ENST00000578896 LRCH3Q96II8 777 aa10.79□□□□□ -0.68
GGA3-207ENST00000578896 APBA2Q99767 749 aa10.79□□□□□ -0.68
GGA3-207ENST00000578896 HAUS7Q99871 368 aa10.79□□□□□ -0.68
GGA3-207ENST00000578896 TANGO6Q9C0B7 1094 aa10.79□□□□□ -0.68
GGA3-207ENST00000578896 RLFQ13129 1914 aa10.79□□□□□ -0.68
GGA3-207ENST00000578896 USP17L12C9JPN9 530 aa10.78□□□□□ -0.68
GGA3-207ENST00000578896 USP17L21D6R901 530 aa10.78□□□□□ -0.68
GGA3-207ENST00000578896 CNGA1P29973 690 aa10.78□□□□□ -0.68
GGA3-207ENST00000578896 CYP2C19P33261 490 aa10.78□□□□□ -0.68
GGA3-207ENST00000578896 CDK8P49336 464 aa10.78□□□□□ -0.68
GGA3-207ENST00000578896 CCNA1P78396 465 aa10.78□□□□□ -0.68
GGA3-207ENST00000578896 ATP2B2Q01814 1243 aa10.78□□□□□ -0.68
GGA3-207ENST00000578896 ANO1Q5XXA6 986 aa10.78□□□□□ -0.68
GGA3-207ENST00000578896 TRPV1Q8NER1 839 aa10.78□□□□□ -0.68
GGA3-207ENST00000578896 MOV10L1Q9BXT6 1211 aaKnown RBP10.78□□□□□ -0.68
GGA3-207ENST00000578896 PUS7LQ9H0K6 701 aaKnown RBP10.78□□□□□ -0.68
GGA3-207ENST00000578896 SLC4A4Q9Y6R1 1079 aa10.78□□□□□ -0.68
GGA3-207ENST00000578896 COL6A3P12111 3177 aa10.77□□□□□ -0.68
GGA3-207ENST00000578896 SLC15A5A6NIM6 579 aa10.77□□□□□ -0.69
GGA3-207ENST00000578896 RAD21O60216 631 aa10.77□□□□□ -0.69
GGA3-207ENST00000578896 GLRX3O76003 335 aaKnown RBP10.77□□□□□ -0.69
GGA3-207ENST00000578896 PLS1Q14651 629 aa10.77□□□□□ -0.69
GGA3-207ENST00000578896 COG2Q14746 738 aa10.77□□□□□ -0.69
GGA3-207ENST00000578896 LRRC26Q2I0M4 334 aa10.77□□□□□ -0.69
GGA3-207ENST00000578896 C12orf60Q5U649 245 aa10.77□□□□□ -0.69
GGA3-207ENST00000578896 MFSD14CQ5VZR4 134 aa10.77□□□□□ -0.69
GGA3-207ENST00000578896 TMED8Q6PL24 325 aaPredicted RBP10.77□□□□□ -0.69
GGA3-207ENST00000578896 LBX2Q6XYB7 198 aa10.77□□□□□ -0.69
GGA3-207ENST00000578896 TMEM179Q6ZVK1 233 aa10.77□□□□□ -0.69
GGA3-207ENST00000578896 TRMT44Q8IYL2 757 aaKnown RBP10.77□□□□□ -0.69
GGA3-207ENST00000578896 ATG4CQ96DT6 458 aa10.77□□□□□ -0.69
GGA3-207ENST00000578896 LRRCC1Q9C099 1032 aa10.77□□□□□ -0.69
GGA3-207ENST00000578896 IVNS1ABPQ9Y6Y0 642 aa10.77□□□□□ -0.69
GGA3-207ENST00000578896 FRMPD3Q5JV73 1810 aa10.77□□□□□ -0.69
GGA3-207ENST00000578896 COBLO75128 1261 aa10.76□□□□□ -0.69
GGA3-207ENST00000578896 FLOT1O75955 427 aa10.76□□□□□ -0.69
GGA3-207ENST00000578896 CAPN2P17655 700 aa10.76□□□□□ -0.69
GGA3-207ENST00000578896 ERCC3P19447 782 aa10.76□□□□□ -0.69
GGA3-207ENST00000578896 ADORA2AP29274 412 aa10.76□□□□□ -0.69
GGA3-207ENST00000578896 DSG3P32926 999 aa10.76□□□□□ -0.69
GGA3-207ENST00000578896 MAGEA10P43363 369 aaPredicted RBP10.76□□□□□ -0.69
GGA3-207ENST00000578896 ATN1P54259 1190 aaPredicted RBP10.76□□□□□ -0.69
GGA3-207ENST00000578896 ICA1Q05084 483 aa10.76□□□□□ -0.69
GGA3-207ENST00000578896 GRB14Q14449 540 aa10.76□□□□□ -0.69
GGA3-207ENST00000578896 PRAMEF19Q5SWL8 479 aa10.76□□□□□ -0.69
GGA3-207ENST00000578896 CTR9Q6PD62 1173 aa10.76□□□□□ -0.69
GGA3-207ENST00000578896 DPP9Q86TI2 863 aa10.76□□□□□ -0.69
GGA3-207ENST00000578896 NCAPG2Q86XI2 1143 aa10.76□□□□□ -0.69
GGA3-207ENST00000578896 GDF15Q99988 308 aa10.76□□□□□ -0.69
GGA3-207ENST00000578896 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.76□□□□□ -0.694e-7■■■■□ 19.6
GGA3-207ENST00000578896 SPATC1LQ9H0A9 340 aa10.76□□□□□ -0.69
GGA3-207ENST00000578896 ATP8A2Q9NTI2 1148 aa10.76□□□□□ -0.69
GGA3-207ENST00000578896 FBXO28Q9NVF7 368 aa10.76□□□□□ -0.69
GGA3-207ENST00000578896 HOXC10Q9NYD6 342 aa10.76□□□□□ -0.69
GGA3-207ENST00000578896 SWAP70Q9UH65 585 aa10.76□□□□□ -0.69
GGA3-207ENST00000578896 COL11A1P12107 1806 aaPredicted RBP10.76□□□□□ -0.69
GGA3-207ENST00000578896 LAMA2P24043 3122 aaKnown RBP10.75□□□□□ -0.69
GGA3-207ENST00000578896 A0A0C4DFX4 3053 aa10.75□□□□□ -0.69
GGA3-207ENST00000578896 MYCNP04198 464 aaPredicted RBP10.75□□□□□ -0.69
GGA3-207ENST00000578896 COL6A1P12109 1028 aa10.75□□□□□ -0.69
GGA3-207ENST00000578896 EEF2P13639 858 aaKnown RBP10.75□□□□□ -0.69
GGA3-207ENST00000578896 UBE3CQ15386 1083 aa10.75□□□□□ -0.69
GGA3-207ENST00000578896 GJC2Q5T442 439 aaPredicted RBP10.75□□□□□ -0.69
GGA3-207ENST00000578896 C16orf86Q6ZW13 317 aa10.75□□□□□ -0.69
GGA3-207ENST00000578896 SENP6Q9GZR1 1112 aaPredicted RBP10.75□□□□□ -0.69
GGA3-207ENST00000578896 VCPKMTQ9H867 229 aa10.75□□□□□ -0.69
GGA3-207ENST00000578896 ARHGEF10LQ9HCE6 1279 aa10.75□□□□□ -0.69
GGA3-207ENST00000578896 DDX20Q9UHI6 824 aaKnown RBP10.75□□□□□ -0.69
GGA3-207ENST00000578896 TMX2Q9Y320 296 aa10.75□□□□□ -0.69
GGA3-207ENST00000578896 PARP14Q460N5 1801 aa10.74□□□□□ -0.69
GGA3-207ENST00000578896 MINDY4BA8MYZ0 360 aa10.74□□□□□ -0.69
GGA3-207ENST00000578896 HOXC6P09630 235 aa10.74□□□□□ -0.69
GGA3-207ENST00000578896 MDM2Q00987 491 aaPredicted RBP10.74□□□□□ -0.69
GGA3-207ENST00000578896 TMEM132BQ14DG7 1078 aa10.74□□□□□ -0.69
GGA3-207ENST00000578896 OSBP2Q969R2 916 aa10.74□□□□□ -0.69
GGA3-207ENST00000578896 STRBPQ96SI9 672 aaKnown RBP10.74□□□□□ -0.69
GGA3-207ENST00000578896 NUP88Q99567 741 aaPredicted RBP10.74□□□□□ -0.69
GGA3-207ENST00000578896 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.74□□□□□ -0.69
GGA3-207ENST00000578896 ECHDC1Q9NTX5 307 aa10.74□□□□□ -0.69
GGA3-207ENST00000578896 GSG1L2A8MUP6 293 aa10.73□□□□□ -0.69
GGA3-207ENST00000578896 IGHA2P01877 340 aa10.73□□□□□ -0.69
GGA3-207ENST00000578896 PGK2P07205 417 aa10.73□□□□□ -0.69
GGA3-207ENST00000578896 FAM83BQ5T0W9 1011 aa10.73□□□□□ -0.69
GGA3-207ENST00000578896 Q7L0L9 218 aa10.73□□□□□ -0.69
GGA3-207ENST00000578896 AMOTL1Q8IY63 956 aa10.73□□□□□ -0.69
GGA3-207ENST00000578896 OTUD7AQ8TE49 926 aaPredicted RBP10.73□□□□□ -0.69
GGA3-207ENST00000578896 CHMP4CQ96CF2 233 aa10.73□□□□□ -0.69
GGA3-207ENST00000578896 CCDC17Q96LX7 622 aa10.73□□□□□ -0.69
GGA3-207ENST00000578896 UBE2OQ9C0C9 1292 aaKnown RBP10.73□□□□□ -0.69
GGA3-207ENST00000578896 CHMP4BQ9H444 224 aaKnown RBP10.73□□□□□ -0.69
GGA3-207ENST00000578896 DCTPP1Q9H773 170 aa10.73□□□□□ -0.69
GGA3-207ENST00000578896 CUL9Q8IWT3 2517 aa10.73□□□□□ -0.69
GGA3-207ENST00000578896 M0R2C6 588 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms