RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 C2orf69Q8N8R5 385 aa19.65■□□□□ 0.74
SREBF1-218ENST00000578469 SLC44A5Q8NCS7 719 aa19.65■□□□□ 0.74
SREBF1-218ENST00000578469 NEDD1Q8NHV4 660 aa19.65■□□□□ 0.74
SREBF1-218ENST00000578469 TAOK2Q9UL54 1235 aa19.65■□□□□ 0.74
SREBF1-218ENST00000578469 NMT2O60551 498 aa19.64■□□□□ 0.73
SREBF1-218ENST00000578469 DEXIO95424 95 aa19.64■□□□□ 0.73
SREBF1-218ENST00000578469 VIL1P09327 827 aaKnown RBP19.64■□□□□ 0.73
SREBF1-218ENST00000578469 KIF5BP33176 963 aa19.64■□□□□ 0.73
SREBF1-218ENST00000578469 TROAPQ12815 778 aa19.64■□□□□ 0.73
SREBF1-218ENST00000578469 SYAP1Q96A49 352 aaPredicted RBP19.64■□□□□ 0.73
SREBF1-218ENST00000578469 DCPSQ96C86 337 aaKnown RBP19.64■□□□□ 0.73
SREBF1-218ENST00000578469 MAP3K14Q99558 947 aa19.64■□□□□ 0.73
SREBF1-218ENST00000578469 IDI2Q9BXS1 227 aa19.64■□□□□ 0.73
SREBF1-218ENST00000578469 DHX36Q9H2U1 1008 aaKnown RBP19.64■□□□□ 0.73
SREBF1-218ENST00000578469 GBA2Q9HCG7 927 aaPredicted RBP19.64■□□□□ 0.73
SREBF1-218ENST00000578469 DDX4Q9NQI0 724 aaKnown RBP19.64■□□□□ 0.73
SREBF1-218ENST00000578469 SAGE1Q9NXZ1 904 aa19.64■□□□□ 0.73
SREBF1-218ENST00000578469 ZBTB12Q9Y330 459 aaPredicted RBP19.64■□□□□ 0.73
SREBF1-218ENST00000578469 ELP1O95163 1332 aa19.63■□□□□ 0.73
SREBF1-218ENST00000578469 SHTN1A0MZ66 631 aa19.63■□□□□ 0.73
SREBF1-218ENST00000578469 PSMD14O00487 310 aa19.63■□□□□ 0.73
SREBF1-218ENST00000578469 CFAP100Q494V2 611 aa19.63■□□□□ 0.73
SREBF1-218ENST00000578469 TBC1D10BQ4KMP7 808 aaPredicted RBP19.63■□□□□ 0.73
SREBF1-218ENST00000578469 RGMBQ6NW40 437 aa19.63■□□□□ 0.73
SREBF1-218ENST00000578469 BRAPQ7Z569 592 aa19.63■□□□□ 0.73
SREBF1-218ENST00000578469 GPT2Q8TD30 523 aa19.63■□□□□ 0.73
SREBF1-218ENST00000578469 CCDC102AQ96A19 550 aa19.63■□□□□ 0.73
SREBF1-218ENST00000578469 RNF26Q9BY78 433 aaPredicted RBP19.63■□□□□ 0.73
SREBF1-218ENST00000578469 SERPINB13Q9UIV8 391 aa19.63■□□□□ 0.73
SREBF1-218ENST00000578469 GNAQP50148 359 aa19.62■□□□□ 0.73
SREBF1-218ENST00000578469 GABPAQ06546 454 aa19.62■□□□□ 0.73
SREBF1-218ENST00000578469 RCSD1Q6JBY9 416 aa19.62■□□□□ 0.73
SREBF1-218ENST00000578469 FAM173BQ6P4H8 233 aa19.62■□□□□ 0.73
SREBF1-218ENST00000578469 SAMD7Q7Z3H4 446 aa19.62■□□□□ 0.73
SREBF1-218ENST00000578469 NBPF11Q86T75 865 aa19.62■□□□□ 0.73
SREBF1-218ENST00000578469 OGFOD1Q8N543 542 aa19.62■□□□□ 0.73
SREBF1-218ENST00000578469 SPATA32Q96LK8 384 aa19.62■□□□□ 0.73
SREBF1-218ENST00000578469 EHD4Q9H223 541 aa19.62■□□□□ 0.73
SREBF1-218ENST00000578469 IL17RBQ9NRM6 502 aa19.62■□□□□ 0.73
SREBF1-218ENST00000578469 TMOD2Q9NZR1 351 aa19.62■□□□□ 0.73
SREBF1-218ENST00000578469 ZNF646O15015 1829 aaPredicted RBP19.62■□□□□ 0.73
SREBF1-218ENST00000578469 PSME4Q14997 1843 aa19.61■□□□□ 0.73
SREBF1-218ENST00000578469 XBP1P17861 261 aa19.61■□□□□ 0.73
SREBF1-218ENST00000578469 DEKP35659 375 aaKnown RBP19.61■□□□□ 0.73
SREBF1-218ENST00000578469 GNL2Q13823 731 aaKnown RBP19.61■□□□□ 0.73
SREBF1-218ENST00000578469 SAFBQ15424 915 aaKnown RBP eCLIP19.61■□□□□ 0.73
SREBF1-218ENST00000578469 KRT40Q6A162 431 aa19.61■□□□□ 0.73
SREBF1-218ENST00000578469 OTUD7BQ6GQQ9 843 aa19.61■□□□□ 0.73
SREBF1-218ENST00000578469 CAVIN1Q6NZI2 390 aaKnown RBP19.61■□□□□ 0.73
SREBF1-218ENST00000578469 TMTC3Q6ZXV5 915 aa19.61■□□□□ 0.73
SREBF1-218ENST00000578469 PNMA1Q8ND90 353 aa19.61■□□□□ 0.73
SREBF1-218ENST00000578469 AGBL3Q8NEM8 1001 aa19.61■□□□□ 0.73
SREBF1-218ENST00000578469 TFIP11Q9UBB9 837 aaKnown RBP19.61■□□□□ 0.73
SREBF1-218ENST00000578469 PDE4DIPQ5VU43 2346 aa19.6■□□□□ 0.73
SREBF1-218ENST00000578469 GOLGA6L4A6NEF3 574 aa19.6■□□□□ 0.73
SREBF1-218ENST00000578469 PRPF3O43395 683 aaKnown RBP19.6■□□□□ 0.73
SREBF1-218ENST00000578469 GADD45BO75293 160 aaPredicted RBP19.6■□□□□ 0.73
SREBF1-218ENST00000578469 ENTPD3O75355 529 aa19.6■□□□□ 0.73
SREBF1-218ENST00000578469 ZNF157P51786 506 aaPredicted RBP19.6■□□□□ 0.73
SREBF1-218ENST00000578469 NFIAQ12857 509 aa19.6■□□□□ 0.73
SREBF1-218ENST00000578469 DLGAP5Q15398 846 aa19.6■□□□□ 0.73
SREBF1-218ENST00000578469 PPP4R3BQ5MIZ7 849 aa19.6■□□□□ 0.73
SREBF1-218ENST00000578469 SULF1Q8IWU6 871 aa19.6■□□□□ 0.73
SREBF1-218ENST00000578469 RBM27Q9P2N5 1060 aaKnown RBP19.6■□□□□ 0.73
SREBF1-218ENST00000578469 STX8Q9UNK0 236 aa19.6■□□□□ 0.73
SREBF1-218ENST00000578469 TOP1P11387 765 aaKnown RBP19.59■□□□□ 0.73
SREBF1-218ENST00000578469 MMP14P50281 582 aa19.59■□□□□ 0.73
SREBF1-218ENST00000578469 KIF23Q02241 960 aaPredicted RBP19.59■□□□□ 0.73
SREBF1-218ENST00000578469 KIF4BQ2VIQ3 1234 aa19.59■□□□□ 0.73
SREBF1-218ENST00000578469 ZSCAN29Q8IWY8 852 aaPredicted RBP19.59■□□□□ 0.73
SREBF1-218ENST00000578469 CCDC82Q8N4S0 544 aa19.59■□□□□ 0.73
SREBF1-218ENST00000578469 LEO1Q8WVC0 666 aaPredicted RBP19.59■□□□□ 0.73
SREBF1-218ENST00000578469 CCDC17Q96LX7 622 aa19.59■□□□□ 0.73
SREBF1-218ENST00000578469 AIFM3Q96NN9 605 aa19.59■□□□□ 0.73
SREBF1-218ENST00000578469 ZIC5Q96T25 663 aa19.59■□□□□ 0.73
SREBF1-218ENST00000578469 GMLQ99445 158 aa19.59■□□□□ 0.73
SREBF1-218ENST00000578469 TRIM34Q9BYJ4 488 aa19.59■□□□□ 0.73
SREBF1-218ENST00000578469 PCDH10Q9P2E7 1040 aa19.59■□□□□ 0.73
SREBF1-218ENST00000578469 PI4KBQ9UBF8 816 aa19.59■□□□□ 0.73
SREBF1-218ENST00000578469 ISY1Q9ULR0 285 aaKnown RBP19.59■□□□□ 0.73
SREBF1-218ENST00000578469 ECM29Q5VYK3 1845 aa19.59■□□□□ 0.73
SREBF1-218ENST00000578469 PLIN4Q96Q06 1357 aa19.58■□□□□ 0.73
SREBF1-218ENST00000578469 ADM5C9JUS6 153 aa19.58■□□□□ 0.72
SREBF1-218ENST00000578469 GRM4Q14833 912 aa19.58■□□□□ 0.72
SREBF1-218ENST00000578469 RBM26Q5T8P6 1007 aaKnown RBP19.58■□□□□ 0.72
SREBF1-218ENST00000578469 FOXP4Q8IVH2 680 aaPredicted RBP19.58■□□□□ 0.72
SREBF1-218ENST00000578469 TMEM47Q9BQJ4 181 aa19.58■□□□□ 0.72
SREBF1-218ENST00000578469 LZTS2Q9BRK4 669 aa19.58■□□□□ 0.72
SREBF1-218ENST00000578469 TDRD3Q9H7E2 651 aaKnown RBP19.58■□□□□ 0.72
SREBF1-218ENST00000578469 FAM198AQ9UFP1 575 aa19.58■□□□□ 0.72
SREBF1-218ENST00000578469 PCDHAC2Q9Y5I4 1007 aa19.58■□□□□ 0.72
SREBF1-218ENST00000578469 TCHHQ07283 1943 aa19.58■□□□□ 0.72
SREBF1-218ENST00000578469 FAM155AB1AL88 458 aaPredicted RBP19.57■□□□□ 0.72
SREBF1-218ENST00000578469 PLEKHA8P1O95397 391 aa19.57■□□□□ 0.72
SREBF1-218ENST00000578469 TCP10Q12799 353 aa19.57■□□□□ 0.72
SREBF1-218ENST00000578469 CMTR1Q8N1G2 835 aaKnown RBP19.57■□□□□ 0.72
SREBF1-218ENST00000578469 PRMT6Q96LA8 375 aaPredicted RBP19.57■□□□□ 0.72
SREBF1-218ENST00000578469 GGA3Q9NZ52 723 aa19.57■□□□□ 0.72
SREBF1-218ENST00000578469 RCOR1Q9UKL0 485 aa19.57■□□□□ 0.72
SREBF1-218ENST00000578469 SPDYE2BA6NHP3 402 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms