RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 SRBD1Q8N5C6 995 aaKnown RBP15.27■□□□□ 0.03
CTC1-203ENST00000578240 L3MBTL3Q96JM7 780 aaPredicted RBP15.27■□□□□ 0.03
CTC1-203ENST00000578240 MAP3K14Q99558 947 aa15.27■□□□□ 0.03
CTC1-203ENST00000578240 GGA3Q9NZ52 723 aa15.27■□□□□ 0.03
CTC1-203ENST00000578240 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.27■□□□□ 0.03
CTC1-203ENST00000578240 COL11A1P12107 1806 aaPredicted RBP15.26■□□□□ 0.03
CTC1-203ENST00000578240 CDKL5O76039 1030 aa15.26■□□□□ 0.03
CTC1-203ENST00000578240 SNHG28P0DPA3 235 aa15.26■□□□□ 0.03
CTC1-203ENST00000578240 MCM4P33991 863 aa15.26■□□□□ 0.03
CTC1-203ENST00000578240 RESTQ13127 1097 aa15.26■□□□□ 0.03
CTC1-203ENST00000578240 TNFAIP1Q13829 316 aa15.26■□□□□ 0.03
CTC1-203ENST00000578240 PPP2R5BQ15173 497 aa15.26■□□□□ 0.03
CTC1-203ENST00000578240 PKN1Q16512 942 aa15.26■□□□□ 0.03
CTC1-203ENST00000578240 OTUD7BQ6GQQ9 843 aa15.26■□□□□ 0.03
CTC1-203ENST00000578240 FERMT3Q86UX7 667 aa15.26■□□□□ 0.03
CTC1-203ENST00000578240 FAM184AQ8NB25 1140 aa15.26■□□□□ 0.03
CTC1-203ENST00000578240 CHMP4CQ96CF2 233 aa15.26■□□□□ 0.03
CTC1-203ENST00000578240 SLC26A6Q9BXS9 759 aa15.26■□□□□ 0.03
CTC1-203ENST00000578240 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.26■□□□□ 0.03
CTC1-203ENST00000578240 RBM28Q9NW13 759 aaKnown RBP15.26■□□□□ 0.03
CTC1-203ENST00000578240 PALM3A6NDB9 673 aaPredicted RBP15.25■□□□□ 0.03
CTC1-203ENST00000578240 MPHOSPH10O00566 681 aaKnown RBP15.25■□□□□ 0.03
CTC1-203ENST00000578240 TTLL1O95922 423 aa15.25■□□□□ 0.03
CTC1-203ENST00000578240 PDHBP11177 359 aa15.25■□□□□ 0.03
CTC1-203ENST00000578240 TNNI2P48788 182 aa15.25■□□□□ 0.03
CTC1-203ENST00000578240 FSTL1Q12841 308 aa15.25■□□□□ 0.03
CTC1-203ENST00000578240 ABCB5Q2M3G0 1257 aa15.25■□□□□ 0.03
CTC1-203ENST00000578240 TMEM179Q6ZVK1 233 aa15.25■□□□□ 0.03
CTC1-203ENST00000578240 MIGA2Q7L4E1 593 aa15.25■□□□□ 0.03
CTC1-203ENST00000578240 CCDC82Q8N4S0 544 aa15.25■□□□□ 0.03
CTC1-203ENST00000578240 RNF26Q9BY78 433 aaPredicted RBP15.25■□□□□ 0.03
CTC1-203ENST00000578240 DEFB129Q9H1M3 183 aa15.25■□□□□ 0.03
CTC1-203ENST00000578240 CCDC196A0A1B0GTZ2 297 aa15.25■□□□□ 0.03
CTC1-203ENST00000578240 PHF20L1A8MW92 1017 aa15.25■□□□□ 0.03
CTC1-203ENST00000578240 CYTH3O43739 400 aa15.25■□□□□ 0.03
CTC1-203ENST00000578240 GH2P01242 217 aa15.25■□□□□ 0.03
CTC1-203ENST00000578240 GUCY1B3Q02153 619 aa15.25■□□□□ 0.03
CTC1-203ENST00000578240 FBXO18Q8NFZ0 1043 aa15.25■□□□□ 0.03
CTC1-203ENST00000578240 CTCFLQ8NI51 663 aaPredicted RBP15.25■□□□□ 0.03
CTC1-203ENST00000578240 TRIM34Q9BYJ4 488 aa15.25■□□□□ 0.03
CTC1-203ENST00000578240 RBBP6Q7Z6E9 1792 aaKnown RBP15.24■□□□□ 0.03
CTC1-203ENST00000578240 hCG_1642624A0A1W2PR95 340 aa15.24■□□□□ 0.03
CTC1-203ENST00000578240 GOLGA8HP0CJ92 632 aa15.24■□□□□ 0.03
CTC1-203ENST00000578240 EEF2P13639 858 aaKnown RBP15.24■□□□□ 0.03
CTC1-203ENST00000578240 ICA1Q05084 483 aa15.24■□□□□ 0.03
CTC1-203ENST00000578240 SSRP1Q08945 709 aaKnown RBP15.24■□□□□ 0.03
CTC1-203ENST00000578240 NBR1Q14596 966 aa15.24■□□□□ 0.03
CTC1-203ENST00000578240 NBPF12Q5TAG4 269 aaPredicted RBP15.24■□□□□ 0.03
CTC1-203ENST00000578240 FAM173BQ6P4H8 233 aa15.24■□□□□ 0.03
CTC1-203ENST00000578240 CPLX2Q6PUV4 134 aaKnown RBP15.24■□□□□ 0.03
CTC1-203ENST00000578240 APOBEC3FQ8IUX4 373 aaKnown RBP15.24■□□□□ 0.03
CTC1-203ENST00000578240 SMC1BQ8NDV3 1235 aa15.24■□□□□ 0.03
CTC1-203ENST00000578240 ALG1Q9BT22 464 aa15.24■□□□□ 0.03
CTC1-203ENST00000578240 CPVLQ9H3G5 476 aa15.24■□□□□ 0.03
CTC1-203ENST00000578240 ADARB2Q9NS39 739 aaKnown RBP15.24■□□□□ 0.03
CTC1-203ENST00000578240 NYAP2Q9P242 653 aa15.24■□□□□ 0.03
CTC1-203ENST00000578240 CLIP2Q9UDT6 1046 aa15.24■□□□□ 0.03
CTC1-203ENST00000578240 ZBTB21Q9ULJ3 1066 aa15.24■□□□□ 0.03
CTC1-203ENST00000578240 MTMR7Q9Y216 660 aa15.24■□□□□ 0.03
CTC1-203ENST00000578240 PITPNM2Q9BZ72 1349 aa15.24■□□□□ 0.03
CTC1-203ENST00000578240 LOC285556D6RIA3 1793 aa15.23■□□□□ 0.03
CTC1-203ENST00000578240 A0A1W2PRG0 241 aa15.23■□□□□ 0.03
CTC1-203ENST00000578240 USP17L5A8MUK1 530 aa15.23■□□□□ 0.03
CTC1-203ENST00000578240 KIF28PB7ZC32 967 aa15.23■□□□□ 0.03
CTC1-203ENST00000578240 FOXD4L6Q3SYB3 417 aaPredicted RBP15.23■□□□□ 0.03
CTC1-203ENST00000578240 USP17L2Q6R6M4 530 aa15.23■□□□□ 0.03
CTC1-203ENST00000578240 FOXD4L3Q6VB84 417 aaPredicted RBP15.23■□□□□ 0.03
CTC1-203ENST00000578240 MKL1Q969V6 931 aa15.23■□□□□ 0.03
CTC1-203ENST00000578240 C8orf76Q96K31 380 aa15.23■□□□□ 0.03
CTC1-203ENST00000578240 KIF3AQ9Y496 699 aa15.23■□□□□ 0.03
CTC1-203ENST00000578240 MYH7BA7E2Y1 1941 aa15.23■□□□□ 0.03
CTC1-203ENST00000578240 POTECB2RU33 542 aa15.22■□□□□ 0.03
CTC1-203ENST00000578240 PRPF3O43395 683 aaKnown RBP15.22■□□□□ 0.03
CTC1-203ENST00000578240 DEXIO95424 95 aa15.22■□□□□ 0.03
CTC1-203ENST00000578240 APLP1P51693 650 aa15.22■□□□□ 0.03
CTC1-203ENST00000578240 GBP4Q96PP9 640 aa15.22■□□□□ 0.03
CTC1-203ENST00000578240 KANSL2Q9H9L4 492 aa15.22■□□□□ 0.03
CTC1-203ENST00000578240 PDIA4P13667 645 aaKnown RBP15.22■□□□□ 0.03
CTC1-203ENST00000578240 LMOD1P29536 600 aaPredicted RBP15.22■□□□□ 0.03
CTC1-203ENST00000578240 KIF5BP33176 963 aa15.22■□□□□ 0.03
CTC1-203ENST00000578240 CAP2P40123 477 aa15.22■□□□□ 0.03
CTC1-203ENST00000578240 PRAMEF18Q5VWM3 479 aa15.22■□□□□ 0.03
CTC1-203ENST00000578240 KRT40Q6A162 431 aa15.22■□□□□ 0.03
CTC1-203ENST00000578240 DLK2Q6UY11 383 aa15.22■□□□□ 0.03
CTC1-203ENST00000578240 FRMPD2Q68DX3 1309 aaPredicted RBP15.21■□□□□ 0.03
CTC1-203ENST00000578240 IQCA1LA6NCM1 817 aa15.21■□□□□ 0.03
CTC1-203ENST00000578240 H3BQV1 296 aa15.21■□□□□ 0.03
CTC1-203ENST00000578240 KIF23Q02241 960 aaPredicted RBP15.21■□□□□ 0.03
CTC1-203ENST00000578240 DNM1Q05193 864 aaKnown RBP15.21■□□□□ 0.03
CTC1-203ENST00000578240 ZNF543Q08ER8 600 aa15.21■□□□□ 0.03
CTC1-203ENST00000578240 NPY5RQ15761 445 aa15.21■□□□□ 0.03
CTC1-203ENST00000578240 IFFO2Q5TF58 517 aa15.21■□□□□ 0.03
CTC1-203ENST00000578240 CCDC84Q86UT8 332 aaPredicted RBP15.21■□□□□ 0.03
CTC1-203ENST00000578240 TRIM22Q8IYM9 498 aa15.21■□□□□ 0.03
CTC1-203ENST00000578240 RGS22Q8NE09 1264 aa15.21■□□□□ 0.03
CTC1-203ENST00000578240 SPZ1Q9BXG8 430 aa15.21■□□□□ 0.03
CTC1-203ENST00000578240 FZD1Q9UP38 647 aa15.21■□□□□ 0.03
CTC1-203ENST00000578240 CNPY2Q9Y2B0 182 aa15.21■□□□□ 0.03
CTC1-203ENST00000578240 KLRF2D3W0D1 207 aa15.2■□□□□ 0.02
CTC1-203ENST00000578240 PARP1P09874 1014 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms