RNA–Protein interactions for RNA: ENST00000578208.1

GGA3-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-204ENST00000578208 GPRC5AQ8NFJ5 357 aa13.81□□□□□ -0.2
GGA3-204ENST00000578208 WDR46O15213 610 aaKnown RBP13.8□□□□□ -0.2
GGA3-204ENST00000578208 ERVK-9P63128 1117 aa13.8□□□□□ -0.2
GGA3-204ENST00000578208 ERVK-24P63145 666 aa13.8□□□□□ -0.2
GGA3-204ENST00000578208 CCNA1P78396 465 aa13.8□□□□□ -0.2
GGA3-204ENST00000578208 ZNF589Q86UQ0 364 aaPredicted RBP13.8□□□□□ -0.2
GGA3-204ENST00000578208 ARMC5Q96C12 935 aa13.8□□□□□ -0.2
GGA3-204ENST00000578208 TOMM22Q9NS69 142 aa13.8□□□□□ -0.2
GGA3-204ENST00000578208 NYAP2Q9P242 653 aa13.8□□□□□ -0.2
GGA3-204ENST00000578208 RABGAP1Q9Y3P9 1069 aa13.8□□□□□ -0.2
GGA3-204ENST00000578208 ZMYM6O95789 1325 aa13.8□□□□□ -0.2
GGA3-204ENST00000578208 MGAMO43451 1857 aa13.79□□□□□ -0.2
GGA3-204ENST00000578208 TSPY2A6NKD2 308 aa13.79□□□□□ -0.2
GGA3-204ENST00000578208 HSPD1P10809 573 aaKnown RBP13.79□□□□□ -0.2
GGA3-204ENST00000578208 MAPK4P31152 587 aa13.79□□□□□ -0.2
GGA3-204ENST00000578208 GRK4P32298 578 aa13.79□□□□□ -0.2
GGA3-204ENST00000578208 CTDSPL2Q05D32 466 aa13.79□□□□□ -0.2
GGA3-204ENST00000578208 CENPQQ7L2Z9 268 aaPredicted RBP13.79□□□□□ -0.2
GGA3-204ENST00000578208 SPICE1Q8N0Z3 855 aa13.79□□□□□ -0.2
GGA3-204ENST00000578208 SLAIN1Q8ND83 568 aa13.79□□□□□ -0.2
GGA3-204ENST00000578208 TMEM106CQ9BVX2 250 aa13.79□□□□□ -0.2
GGA3-204ENST00000578208 HOXC10Q9NYD6 342 aa13.79□□□□□ -0.2
GGA3-204ENST00000578208 BIN2Q9UBW5 565 aaPredicted RBP13.79□□□□□ -0.2
GGA3-204ENST00000578208 ANAPC4Q9UJX5 808 aa13.79□□□□□ -0.2
GGA3-204ENST00000578208 PLIN4Q96Q06 1357 aa13.79□□□□□ -0.2
GGA3-204ENST00000578208 SPDYE16A6NNV3 312 aaPredicted RBP13.78□□□□□ -0.2
GGA3-204ENST00000578208 FOXP2O15409 715 aa13.78□□□□□ -0.2
GGA3-204ENST00000578208 FLOT1O75955 427 aa13.78□□□□□ -0.2
GGA3-204ENST00000578208 TTLL1O95922 423 aa13.78□□□□□ -0.2
GGA3-204ENST00000578208 FGAP02671 866 aa13.78□□□□□ -0.2
GGA3-204ENST00000578208 GSPT1P15170 499 aaKnown RBP13.78□□□□□ -0.2
GGA3-204ENST00000578208 FLT3LGP49771 235 aa13.78□□□□□ -0.2
GGA3-204ENST00000578208 UBXN2AP68543 259 aa13.78□□□□□ -0.2
GGA3-204ENST00000578208 TFAP4Q01664 338 aa13.78□□□□□ -0.2
GGA3-204ENST00000578208 COG2Q14746 738 aa13.78□□□□□ -0.2
GGA3-204ENST00000578208 SAMD1Q6SPF0 538 aaPredicted RBP13.78□□□□□ -0.2
GGA3-204ENST00000578208 LBX2Q6XYB7 198 aa13.78□□□□□ -0.2
GGA3-204ENST00000578208 SIAH1Q8IUQ4 282 aa13.78□□□□□ -0.2
GGA3-204ENST00000578208 NEDD1Q8NHV4 660 aa13.78□□□□□ -0.2
GGA3-204ENST00000578208 SH3TC2Q8TF17 1288 aa13.78□□□□□ -0.2
GGA3-204ENST00000578208 RUFY2Q8WXA3 655 aa13.78□□□□□ -0.2
GGA3-204ENST00000578208 ZNF333Q96JL9 665 aa13.78□□□□□ -0.2
GGA3-204ENST00000578208 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.78□□□□□ -0.2
GGA3-204ENST00000578208 TXNRD2Q9NNW7 524 aa13.78□□□□□ -0.2
GGA3-204ENST00000578208 RBPJLQ9UBG7 517 aa13.78□□□□□ -0.2
GGA3-204ENST00000578208 CLIP2Q9UDT6 1046 aa13.78□□□□□ -0.2
GGA3-204ENST00000578208 GABRQQ9UN88 632 aa13.78□□□□□ -0.2
GGA3-204ENST00000578208 GREB1LQ9C091 1923 aaPredicted RBP13.78□□□□□ -0.2
GGA3-204ENST00000578208 RANBP6O60518 1105 aaKnown RBP13.77□□□□□ -0.21
GGA3-204ENST00000578208 IRF5Q13568 498 aa13.77□□□□□ -0.21
GGA3-204ENST00000578208 FAM47AQ5JRC9 791 aa13.77□□□□□ -0.21
GGA3-204ENST00000578208 RRP12Q5JTH9 1297 aaKnown RBP13.77□□□□□ -0.21
GGA3-204ENST00000578208 WDR78Q5VTH9 848 aa13.77□□□□□ -0.21
GGA3-204ENST00000578208 MB21D1Q8N884 522 aa13.77□□□□□ -0.21
GGA3-204ENST00000578208 SOCS4Q8WXH5 440 aa13.77□□□□□ -0.21
GGA3-204ENST00000578208 RAD50Q92878 1312 aa13.77□□□□□ -0.21
GGA3-204ENST00000578208 CEP95Q96GE4 821 aa13.77□□□□□ -0.21
GGA3-204ENST00000578208 RNF41Q9H4P4 317 aaPredicted RBP13.77□□□□□ -0.21
GGA3-204ENST00000578208 MTMR4Q9NYA4 1195 aa13.77□□□□□ -0.21
GGA3-204ENST00000578208 SYNPO2Q9UMS6 1093 aa13.77□□□□□ -0.21
GGA3-204ENST00000578208 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.77□□□□□ -0.21
GGA3-204ENST00000578208 IGKV6D-41A0A0C4DH26 115 aa13.76□□□□□ -0.21
GGA3-204ENST00000578208 ADCY3O60266 1144 aa13.76□□□□□ -0.21
GGA3-204ENST00000578208 MYCP01106 439 aaPredicted RBP13.76□□□□□ -0.21
GGA3-204ENST00000578208 PCP11498 1178 aaKnown RBP13.76□□□□□ -0.21
GGA3-204ENST00000578208 MLLT1Q03111 559 aaPredicted RBP13.76□□□□□ -0.21
GGA3-204ENST00000578208 KIAA1755Q5JYT7 1200 aa13.76□□□□□ -0.21
GGA3-204ENST00000578208 PLEKHH3Q7Z736 793 aa13.76□□□□□ -0.21
GGA3-204ENST00000578208 NUDT12Q9BQG2 462 aa13.76□□□□□ -0.21
GGA3-204ENST00000578208 ISY1Q9ULR0 285 aaKnown RBP13.76□□□□□ -0.21
GGA3-204ENST00000578208 IVNS1ABPQ9Y6Y0 642 aa13.76□□□□□ -0.21
GGA3-204ENST00000578208 F5H6K3 240 aa13.75□□□□□ -0.21
GGA3-204ENST00000578208 ZNF213O14771 459 aa13.75□□□□□ -0.21
GGA3-204ENST00000578208 ORC4O43929 436 aa13.75□□□□□ -0.21
GGA3-204ENST00000578208 PEX10O60683 326 aa13.75□□□□□ -0.21
GGA3-204ENST00000578208 CNMDO75829 334 aa13.75□□□□□ -0.21
GGA3-204ENST00000578208 CENPBP07199 599 aaPredicted RBP13.75□□□□□ -0.21
GGA3-204ENST00000578208 DSG3P32926 999 aa13.75□□□□□ -0.21
GGA3-204ENST00000578208 RGS19P49795 217 aa13.75□□□□□ -0.21
GGA3-204ENST00000578208 HAND2P61296 217 aa13.75□□□□□ -0.21
GGA3-204ENST00000578208 KLRC3Q07444 240 aa13.75□□□□□ -0.21
GGA3-204ENST00000578208 FAM83BQ5T0W9 1011 aa13.75□□□□□ -0.21
GGA3-204ENST00000578208 MFSD6Q6ZSS7 791 aa13.75□□□□□ -0.21
GGA3-204ENST00000578208 GPR142Q7Z601 462 aa13.75□□□□□ -0.21
GGA3-204ENST00000578208 LRRC47Q8N1G4 583 aaKnown RBP13.75□□□□□ -0.21
GGA3-204ENST00000578208 PXYLP1Q8TE99 480 aa13.75□□□□□ -0.21
GGA3-204ENST00000578208 CCDC136Q96JN2 1154 aa13.75□□□□□ -0.21
GGA3-204ENST00000578208 DSCC1Q9BVC3 393 aa13.75□□□□□ -0.21
GGA3-204ENST00000578208 PORCNQ9H237 461 aa13.75□□□□□ -0.21
GGA3-204ENST00000578208 CTNNA3Q9UI47 895 aa13.75□□□□□ -0.21
GGA3-204ENST00000578208 STX8Q9UNK0 236 aa13.75□□□□□ -0.21
GGA3-204ENST00000578208 CTDP1Q9Y5B0 961 aaPredicted RBP13.75□□□□□ -0.21
GGA3-204ENST00000578208 NDUFB10O96000 172 aa13.74□□□□□ -0.21
GGA3-204ENST00000578208 RGS2P41220 211 aa13.74□□□□□ -0.21
GGA3-204ENST00000578208 PLS1Q14651 629 aa13.74□□□□□ -0.21
GGA3-204ENST00000578208 IMMTQ16891 758 aaKnown RBP13.74□□□□□ -0.21
GGA3-204ENST00000578208 Q3C1V9 767 aa13.74□□□□□ -0.21
GGA3-204ENST00000578208 AKNAD1Q5T1N1 836 aa13.74□□□□□ -0.21
GGA3-204ENST00000578208 MKL1Q969V6 931 aa13.74□□□□□ -0.21
GGA3-204ENST00000578208 ATG4CQ96DT6 458 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms