RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 APPBP2Q92624 585 aa17.42■□□□□ 0.38
SMARCE1-213ENST00000578044 STRBPQ96SI9 672 aaKnown RBP17.42■□□□□ 0.38
SMARCE1-213ENST00000578044 RPAP3Q9H6T3 665 aaPredicted RBP17.42■□□□□ 0.38
SMARCE1-213ENST00000578044 KANSL2Q9H9L4 492 aa17.42■□□□□ 0.38
SMARCE1-213ENST00000578044 SYNPO2Q9UMS6 1093 aa17.42■□□□□ 0.38
SMARCE1-213ENST00000578044 ROBO3Q96MS0 1386 aa17.41■□□□□ 0.38
SMARCE1-213ENST00000578044 A0A1W2PPC1 479 aa17.41■□□□□ 0.38
SMARCE1-213ENST00000578044 ERC2O15083 957 aa17.41■□□□□ 0.38
SMARCE1-213ENST00000578044 PTPREP23469 700 aa17.41■□□□□ 0.38
SMARCE1-213ENST00000578044 CDK8P49336 464 aa17.41■□□□□ 0.38
SMARCE1-213ENST00000578044 GRB14Q14449 540 aa17.41■□□□□ 0.38
SMARCE1-213ENST00000578044 SIAH1Q8IUQ4 282 aa17.41■□□□□ 0.38
SMARCE1-213ENST00000578044 ABRAQ8N0Z2 381 aa17.41■□□□□ 0.38
SMARCE1-213ENST00000578044 PUS7LQ9H0K6 701 aaKnown RBP17.41■□□□□ 0.38
SMARCE1-213ENST00000578044 VCPKMTQ9H867 229 aa17.41■□□□□ 0.38
SMARCE1-213ENST00000578044 WDR46O15213 610 aaKnown RBP17.4■□□□□ 0.38
SMARCE1-213ENST00000578044 PRKAB2O43741 272 aa17.4■□□□□ 0.38
SMARCE1-213ENST00000578044 ZKSCAN1P17029 563 aaPredicted RBP17.4■□□□□ 0.38
SMARCE1-213ENST00000578044 CYP2B6P20813 491 aa17.4■□□□□ 0.38
SMARCE1-213ENST00000578044 ICA1Q05084 483 aa17.4■□□□□ 0.38
SMARCE1-213ENST00000578044 CTR9Q6PD62 1173 aa17.4■□□□□ 0.38
SMARCE1-213ENST00000578044 DPF3Q92784 378 aa17.4■□□□□ 0.38
SMARCE1-213ENST00000578044 PAGR1Q9BTK6 254 aa17.4■□□□□ 0.38
SMARCE1-213ENST00000578044 PRO3102Q9H379 93 aa17.4■□□□□ 0.38
SMARCE1-213ENST00000578044 ADAMTS5Q9UNA0 930 aa17.4■□□□□ 0.38
SMARCE1-213ENST00000578044 SLC4A4Q9Y6R1 1079 aa17.4■□□□□ 0.38
SMARCE1-213ENST00000578044 MPHOSPH10O00566 681 aaKnown RBP17.39■□□□□ 0.37
SMARCE1-213ENST00000578044 RNF113AO15541 343 aaKnown RBP17.39■□□□□ 0.37
SMARCE1-213ENST00000578044 SMARCA5O60264 1052 aaPredicted RBP17.39■□□□□ 0.37
SMARCE1-213ENST00000578044 MSCO60682 206 aa17.39■□□□□ 0.37
SMARCE1-213ENST00000578044 CYP2D6P10635 497 aa17.39■□□□□ 0.37
SMARCE1-213ENST00000578044 PRKAR2AP13861 404 aaKnown RBP17.39■□□□□ 0.37
SMARCE1-213ENST00000578044 ZYXQ15942 572 aaKnown RBP17.39■□□□□ 0.37
SMARCE1-213ENST00000578044 NBPF3Q9H094 633 aa17.39■□□□□ 0.37
SMARCE1-213ENST00000578044 MROH8Q9H579 483 aa17.39■□□□□ 0.37
SMARCE1-213ENST00000578044 ZNF287Q9HBT7 754 aa17.39■□□□□ 0.37
SMARCE1-213ENST00000578044 BTBD7Q9P203 1132 aa17.39■□□□□ 0.37
SMARCE1-213ENST00000578044 IVNS1ABPQ9Y6Y0 642 aa17.39■□□□□ 0.37
SMARCE1-213ENST00000578044 ALPK3Q96L96 1907 aa17.39■□□□□ 0.37
SMARCE1-213ENST00000578044 DNAH12Q6ZR08 3092 aa17.38■□□□□ 0.37
SMARCE1-213ENST00000578044 GSG1L2A8MUP6 293 aa17.38■□□□□ 0.37
SMARCE1-213ENST00000578044 AKR1B1P15121 316 aa17.38■□□□□ 0.37
SMARCE1-213ENST00000578044 DSG3P32926 999 aa17.38■□□□□ 0.37
SMARCE1-213ENST00000578044 SLC44A5Q8NCS7 719 aa17.38■□□□□ 0.37
SMARCE1-213ENST00000578044 DYNLL2Q96FJ2 89 aa17.38■□□□□ 0.37
SMARCE1-213ENST00000578044 PCDHB15Q9Y5E8 787 aa17.38■□□□□ 0.37
SMARCE1-213ENST00000578044 ZNFX1Q9P2E3 1918 aaKnown RBP17.38■□□□□ 0.37
SMARCE1-213ENST00000578044 MNX1P50219 401 aaPredicted RBP17.37■□□□□ 0.37
SMARCE1-213ENST00000578044 EVX2Q03828 476 aa17.37■□□□□ 0.37
SMARCE1-213ENST00000578044 CACNB2Q08289 660 aaPredicted RBP17.37■□□□□ 0.37
SMARCE1-213ENST00000578044 MFSD14CQ5VZR4 134 aa17.37■□□□□ 0.37
SMARCE1-213ENST00000578044 OLFML2BQ68BL8 750 aa17.37■□□□□ 0.37
SMARCE1-213ENST00000578044 PI4K2BQ8TCG2 481 aa17.37■□□□□ 0.37
SMARCE1-213ENST00000578044 OSBP2Q969R2 916 aa17.37■□□□□ 0.37
SMARCE1-213ENST00000578044 PAWRQ96IZ0 340 aaKnown RBP17.37■□□□□ 0.37
SMARCE1-213ENST00000578044 SPATC1LQ9H0A9 340 aa17.37■□□□□ 0.37
SMARCE1-213ENST00000578044 SLC5A4Q9NY91 659 aa17.37■□□□□ 0.37
SMARCE1-213ENST00000578044 COLQQ9Y215 455 aaPredicted RBP17.37■□□□□ 0.37
SMARCE1-213ENST00000578044 LAMA3Q16787 3333 aa17.36■□□□□ 0.37
SMARCE1-213ENST00000578044 FRMPD3Q5JV73 1810 aa17.36■□□□□ 0.37
SMARCE1-213ENST00000578044 EVI5O60447 810 aa17.36■□□□□ 0.37
SMARCE1-213ENST00000578044 SLC25A27O95847 323 aa17.36■□□□□ 0.37
SMARCE1-213ENST00000578044 COPB2P35606 906 aa17.36■□□□□ 0.37
SMARCE1-213ENST00000578044 FXR1P51114 621 aaKnown RBP eCLIP17.36■□□□□ 0.37
SMARCE1-213ENST00000578044 RRP1P56182 461 aaKnown RBP17.36■□□□□ 0.37
SMARCE1-213ENST00000578044 HDAC1Q13547 482 aaPredicted RBP17.36■□□□□ 0.37
SMARCE1-213ENST00000578044 SLFNL1Q499Z3 407 aa17.36■□□□□ 0.37
SMARCE1-213ENST00000578044 LHX8Q68G74 356 aa17.36■□□□□ 0.37
SMARCE1-213ENST00000578044 MOV10L1Q9BXT6 1211 aaKnown RBP17.36■□□□□ 0.37
SMARCE1-213ENST00000578044 TANGO6Q9C0B7 1094 aa17.36■□□□□ 0.37
SMARCE1-213ENST00000578044 CWC22Q9HCG8 908 aaKnown RBP17.36■□□□□ 0.37
SMARCE1-213ENST00000578044 GOPCQ9HD26 462 aa17.36■□□□□ 0.37
SMARCE1-213ENST00000578044 NYAP2Q9P242 653 aa17.36■□□□□ 0.37
SMARCE1-213ENST00000578044 SZT2Q5T011 3432 aa17.35■□□□□ 0.37
SMARCE1-213ENST00000578044 PATL2C9JE40 543 aaKnown RBP17.35■□□□□ 0.37
SMARCE1-213ENST00000578044 GPAA1O43292 621 aa17.35■□□□□ 0.37
SMARCE1-213ENST00000578044 PEX10O60683 326 aa17.35■□□□□ 0.37
SMARCE1-213ENST00000578044 COL6A1P12109 1028 aa17.35■□□□□ 0.37
SMARCE1-213ENST00000578044 TRIM32Q13049 653 aa17.35■□□□□ 0.37
SMARCE1-213ENST00000578044 NRBP1Q9UHY1 535 aa17.35■□□□□ 0.37
SMARCE1-213ENST00000578044 SALL3Q9BXA9 1300 aa17.35■□□□□ 0.37
SMARCE1-213ENST00000578044 FLOT1O75955 427 aa17.34■□□□□ 0.37
SMARCE1-213ENST00000578044 EEF2P13639 858 aaKnown RBP17.34■□□□□ 0.37
SMARCE1-213ENST00000578044 KIAA1755Q5JYT7 1200 aa17.34■□□□□ 0.37
SMARCE1-213ENST00000578044 MKL1Q969V6 931 aa17.34■□□□□ 0.37
SMARCE1-213ENST00000578044 PLIN4Q96Q06 1357 aa17.34■□□□□ 0.37
SMARCE1-213ENST00000578044 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.34■□□□□ 0.37
SMARCE1-213ENST00000578044 NACAP1Q9BZK3 213 aa17.34■□□□□ 0.37
SMARCE1-213ENST00000578044 STAP2Q9UGK3 403 aa17.34■□□□□ 0.37
SMARCE1-213ENST00000578044 MYH4Q9Y623 1939 aa17.33■□□□□ 0.37
SMARCE1-213ENST00000578044 COL11A1P12107 1806 aaPredicted RBP17.33■□□□□ 0.37
SMARCE1-213ENST00000578044 CYP2D7A0A087X1C5 515 aa17.33■□□□□ 0.36
SMARCE1-213ENST00000578044 CHGBP05060 677 aa17.33■□□□□ 0.36
SMARCE1-213ENST00000578044 MX1P20591 662 aa17.33■□□□□ 0.36
SMARCE1-213ENST00000578044 RASA1P20936 1047 aa17.33■□□□□ 0.36
SMARCE1-213ENST00000578044 BMP8BP34820 402 aa17.33■□□□□ 0.36
SMARCE1-213ENST00000578044 ATP2B2Q01814 1243 aa17.33■□□□□ 0.36
SMARCE1-213ENST00000578044 CCL14Q16627 93 aa17.33■□□□□ 0.36
SMARCE1-213ENST00000578044 PPP4R3BQ5MIZ7 849 aa17.33■□□□□ 0.36
SMARCE1-213ENST00000578044 C11orf49Q9H6J7 331 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms