RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 FAN1Q9Y2M0 1017 aa11.53□□□□□ -0.56
PTPRM-205ENST00000577827 STK24Q9Y6E0 443 aa11.53□□□□□ -0.56
PTPRM-205ENST00000577827 CEP104O60308 925 aa11.53□□□□□ -0.56
PTPRM-205ENST00000577827 RNF40O75150 1001 aa11.53□□□□□ -0.56
PTPRM-205ENST00000577827 SASH1O94885 1247 aa11.53□□□□□ -0.56
PTPRM-205ENST00000577827 SLFN14P0C7P3 912 aa11.53□□□□□ -0.56
PTPRM-205ENST00000577827 KLHL30Q0D2K2 578 aa11.53□□□□□ -0.56
PTPRM-205ENST00000577827 CABP7Q86V35 215 aa11.53□□□□□ -0.56
PTPRM-205ENST00000577827 IFNL3Q8IZI9 196 aa11.53□□□□□ -0.56
PTPRM-205ENST00000577827 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.53□□□□□ -0.56
PTPRM-205ENST00000577827 PDE6AP16499 860 aa11.53□□□□□ -0.56
PTPRM-205ENST00000577827 CCDC144BQ3MJ40 725 aa11.53□□□□□ -0.56
PTPRM-205ENST00000577827 CC2D1AQ6P1N0 951 aaPredicted RBP11.53□□□□□ -0.56
PTPRM-205ENST00000577827 INTS8Q75QN2 995 aaKnown RBP11.53□□□□□ -0.56
PTPRM-205ENST00000577827 RAB17Q9H0T7 212 aa11.53□□□□□ -0.56
PTPRM-205ENST00000577827 RNF14Q9UBS8 474 aa11.53□□□□□ -0.56
PTPRM-205ENST00000577827 LRWD1Q9UFC0 647 aa11.53□□□□□ -0.56
PTPRM-205ENST00000577827 FAM13AO94988 1023 aa11.52□□□□□ -0.56
PTPRM-205ENST00000577827 CLNS1AP54105 237 aaKnown RBP11.52□□□□□ -0.56
PTPRM-205ENST00000577827 EPHB4P54760 987 aa11.52□□□□□ -0.56
PTPRM-205ENST00000577827 GALNT17Q6IS24 598 aa11.52□□□□□ -0.56
PTPRM-205ENST00000577827 TYW1BQ6NUM6 668 aa11.52□□□□□ -0.56
PTPRM-205ENST00000577827 AEBP2Q6ZN18 517 aaPredicted RBP11.52□□□□□ -0.56
PTPRM-205ENST00000577827 FMR1NBQ8N0W7 255 aaPredicted RBP11.52□□□□□ -0.56
PTPRM-205ENST00000577827 FNBP4Q8N3X1 1017 aaPredicted RBP11.52□□□□□ -0.56
PTPRM-205ENST00000577827 STAMQ92783 540 aa11.52□□□□□ -0.56
PTPRM-205ENST00000577827 RNF26Q9BY78 433 aaPredicted RBP11.52□□□□□ -0.56
PTPRM-205ENST00000577827 MAN1B1Q9UKM7 699 aa11.52□□□□□ -0.56
PTPRM-205ENST00000577827 RPAP1Q9BWH6 1393 aaPredicted RBP11.52□□□□□ -0.57
PTPRM-205ENST00000577827 FMNL1O95466 1100 aaPredicted RBP11.52□□□□□ -0.57
PTPRM-205ENST00000577827 ARID5BQ14865 1188 aa11.52□□□□□ -0.57
PTPRM-205ENST00000577827 PPP1R7Q15435 360 aa11.52□□□□□ -0.57
PTPRM-205ENST00000577827 HAUS3Q68CZ6 603 aa11.52□□□□□ -0.57
PTPRM-205ENST00000577827 RRAGAQ7L523 313 aa11.52□□□□□ -0.57
PTPRM-205ENST00000577827 CACNA2D3Q8IZS8 1091 aa11.52□□□□□ -0.57
PTPRM-205ENST00000577827 IQCGQ9H095 443 aaKnown RBP11.52□□□□□ -0.57
PTPRM-205ENST00000577827 KCNF1Q9H3M0 494 aa11.52□□□□□ -0.57
PTPRM-205ENST00000577827 CUEDC2Q9H467 287 aa11.52□□□□□ -0.57
PTPRM-205ENST00000577827 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.52□□□□□ -0.578e-7■■■□□ 16.9
PTPRM-205ENST00000577827 STIM2Q9P246 746 aa11.52□□□□□ -0.57
PTPRM-205ENST00000577827 MYL1P05976 194 aa11.52□□□□□ -0.57
PTPRM-205ENST00000577827 PPARAQ07869 468 aa11.52□□□□□ -0.57
PTPRM-205ENST00000577827 RBL2Q08999 1139 aa11.52□□□□□ -0.57
PTPRM-205ENST00000577827 CASP8Q14790 479 aa11.52□□□□□ -0.57
PTPRM-205ENST00000577827 UBL4BQ8N7F7 174 aa11.52□□□□□ -0.57
PTPRM-205ENST00000577827 PAIP2Q9BPZ3 127 aaKnown RBP11.52□□□□□ -0.57
PTPRM-205ENST00000577827 NYXQ9GZU5 481 aa11.52□□□□□ -0.57
PTPRM-205ENST00000577827 ADAM21Q9UKJ8 722 aa11.52□□□□□ -0.57
PTPRM-205ENST00000577827 ATP6V0A2Q9Y487 856 aa11.52□□□□□ -0.57
PTPRM-205ENST00000577827 STAMBPO95630 424 aa11.52□□□□□ -0.57
PTPRM-205ENST00000577827 RPN1P04843 607 aaKnown RBP11.52□□□□□ -0.57
PTPRM-205ENST00000577827 SLC8A1P32418 973 aa11.52□□□□□ -0.57
PTPRM-205ENST00000577827 KRT71Q3SY84 523 aa11.52□□□□□ -0.57
PTPRM-205ENST00000577827 CEP85LQ5SZL2 805 aa11.52□□□□□ -0.57
PTPRM-205ENST00000577827 ZNF804AQ7Z570 1209 aa11.52□□□□□ -0.57
PTPRM-205ENST00000577827 NBPF5PQ86XG9 351 aaPredicted RBP11.52□□□□□ -0.57
PTPRM-205ENST00000577827 GDAP1L1Q96MZ0 367 aa11.52□□□□□ -0.57
PTPRM-205ENST00000577827 DNAI2Q9GZS0 605 aa11.52□□□□□ -0.57
PTPRM-205ENST00000577827 KCNK9Q9NPC2 374 aa11.52□□□□□ -0.57
PTPRM-205ENST00000577827 HOMER2Q9NSB8 354 aa11.52□□□□□ -0.57
PTPRM-205ENST00000577827 RNF17Q9BXT8 1623 aaKnown RBP11.51□□□□□ -0.57
PTPRM-205ENST00000577827 GLI2P10070 1586 aa11.51□□□□□ -0.57
PTPRM-205ENST00000577827 SMIM23A6NLE4 172 aa11.51□□□□□ -0.57
PTPRM-205ENST00000577827 A1BGP04217 495 aa11.51□□□□□ -0.57
PTPRM-205ENST00000577827 IFNAR1P17181 557 aa11.51□□□□□ -0.57
PTPRM-205ENST00000577827 LIG3P49916 1009 aa11.51□□□□□ -0.57
PTPRM-205ENST00000577827 ZBTB16Q05516 673 aa11.51□□□□□ -0.57
PTPRM-205ENST00000577827 PPFIBP2Q8ND30 876 aa11.51□□□□□ -0.57
PTPRM-205ENST00000577827 PARP2Q9UGN5 583 aa11.51□□□□□ -0.57
PTPRM-205ENST00000577827 CCNT1O60563 726 aaKnown RBP11.51□□□□□ -0.57
PTPRM-205ENST00000577827 BUB1BO60566 1050 aaPredicted RBP11.51□□□□□ -0.57
PTPRM-205ENST00000577827 CCT5P48643 541 aa11.51□□□□□ -0.57
PTPRM-205ENST00000577827 SLC4A8Q2Y0W8 1093 aa11.51□□□□□ -0.57
PTPRM-205ENST00000577827 KLHL7Q8IXQ5 586 aa11.51□□□□□ -0.57
PTPRM-205ENST00000577827 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.51□□□□□ -0.57
PTPRM-205ENST00000577827 SYMPKQ92797 1274 aaKnown RBP11.51□□□□□ -0.57
PTPRM-205ENST00000577827 FAM207AQ9NSI2 230 aaPredicted RBP11.51□□□□□ -0.57
PTPRM-205ENST00000577827 ABCA6Q8N139 1617 aa11.51□□□□□ -0.57
PTPRM-205ENST00000577827 USP42Q9H9J4 1324 aaKnown RBP11.51□□□□□ -0.57
PTPRM-205ENST00000577827 SPDYE3A6NKU9 549 aa11.51□□□□□ -0.57
PTPRM-205ENST00000577827 CALUO43852 315 aaPredicted RBP11.51□□□□□ -0.57
PTPRM-205ENST00000577827 DDAH1O94760 285 aa11.51□□□□□ -0.57
PTPRM-205ENST00000577827 LDHBP07195 334 aaKnown RBP11.51□□□□□ -0.57
PTPRM-205ENST00000577827 LMNTD2Q8IXW0 634 aa11.51□□□□□ -0.57
PTPRM-205ENST00000577827 CCDC170Q8IYT3 715 aa11.51□□□□□ -0.57
PTPRM-205ENST00000577827 METP08581 1390 aa11.51□□□□□ -0.57
PTPRM-205ENST00000577827 MYO1CO00159 1063 aa11.5□□□□□ -0.57
PTPRM-205ENST00000577827 ATP1A3P13637 1013 aa11.5□□□□□ -0.57
PTPRM-205ENST00000577827 TNFAIP3P21580 790 aa11.5□□□□□ -0.57
PTPRM-205ENST00000577827 HOXA7P31268 230 aaPredicted RBP11.5□□□□□ -0.57
PTPRM-205ENST00000577827 MAGEA9P43362 315 aa11.5□□□□□ -0.57
PTPRM-205ENST00000577827 DCAF17Q5H9S7 520 aaPredicted RBP11.5□□□□□ -0.57
PTPRM-205ENST00000577827 GKAP1Q5VSY0 366 aaPredicted RBP11.5□□□□□ -0.57
PTPRM-205ENST00000577827 PEX26Q7Z412 305 aa11.5□□□□□ -0.57
PTPRM-205ENST00000577827 ERVV-2B6SEH9 535 aa11.5□□□□□ -0.57
PTPRM-205ENST00000577827 PCCAP05165 728 aaPredicted RBP11.5□□□□□ -0.57
PTPRM-205ENST00000577827 ARID4AP29374 1257 aaPredicted RBP11.5□□□□□ -0.57
PTPRM-205ENST00000577827 CTNNA1P35221 906 aaKnown RBP11.5□□□□□ -0.57
PTPRM-205ENST00000577827 CCDC25Q86WR0 208 aa11.5□□□□□ -0.57
PTPRM-205ENST00000577827 BLIDQ8IZY5 108 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms