RNA–Protein interactions for RNA: ENST00000576360.1

CHRNB1-208, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNB1, Length 1,837 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-208ENST00000576360 BEND3Q5T5X7 828 aa12.18□□□□□ -0.46
CHRNB1-208ENST00000576360 GIGYF2Q6Y7W6 1299 aaKnown RBP12.18□□□□□ -0.46
CHRNB1-208ENST00000576360 GPC2Q8N158 579 aa12.18□□□□□ -0.46
CHRNB1-208ENST00000576360 RSRC1Q96IZ7 334 aaKnown RBP12.18□□□□□ -0.46
CHRNB1-208ENST00000576360 USP44Q9H0E7 712 aa12.18□□□□□ -0.46
CHRNB1-208ENST00000576360 TNMDQ9H2S6 317 aa12.18□□□□□ -0.46
CHRNB1-208ENST00000576360 FAM204AQ9H8W3 233 aa12.18□□□□□ -0.46
CHRNB1-208ENST00000576360 LMCD1Q9NZU5 365 aa12.18□□□□□ -0.46
CHRNB1-208ENST00000576360 CAPN7Q9Y6W3 813 aa12.18□□□□□ -0.46
CHRNB1-208ENST00000576360 TCHHQ07283 1943 aa12.18□□□□□ -0.46
CHRNB1-208ENST00000576360 LTBP1Q14766 1721 aa12.18□□□□□ -0.46
CHRNB1-208ENST00000576360 SHTN1A0MZ66 631 aa12.18□□□□□ -0.46
CHRNB1-208ENST00000576360 STX6O43752 255 aa12.18□□□□□ -0.46
CHRNB1-208ENST00000576360 URI1O94763 535 aaPredicted RBP12.18□□□□□ -0.46
CHRNB1-208ENST00000576360 SFSWAPQ12872 951 aaKnown RBP12.18□□□□□ -0.46
CHRNB1-208ENST00000576360 CEP85LQ5SZL2 805 aa12.18□□□□□ -0.46
CHRNB1-208ENST00000576360 TAX1BP1Q86VP1 789 aa12.18□□□□□ -0.46
CHRNB1-208ENST00000576360 HOMER1Q86YM7 354 aa12.18□□□□□ -0.46
CHRNB1-208ENST00000576360 APLFQ8IW19 511 aaPredicted RBP12.18□□□□□ -0.46
CHRNB1-208ENST00000576360 CCDC170Q8IYT3 715 aa12.18□□□□□ -0.46
CHRNB1-208ENST00000576360 SDR16C5Q8N3Y7 309 aa12.18□□□□□ -0.46
CHRNB1-208ENST00000576360 PIK3R5Q8WYR1 880 aa12.18□□□□□ -0.46
CHRNB1-208ENST00000576360 EZH1Q92800 747 aaPredicted RBP12.18□□□□□ -0.46
CHRNB1-208ENST00000576360 METTL22Q9BUU2 404 aaPredicted RBP12.18□□□□□ -0.46
CHRNB1-208ENST00000576360 CLSTN2Q9H4D0 955 aa12.18□□□□□ -0.46
CHRNB1-208ENST00000576360 CD248Q9HCU0 757 aa12.18□□□□□ -0.46
CHRNB1-208ENST00000576360 SUN2Q9UH99 717 aa12.18□□□□□ -0.46
CHRNB1-208ENST00000576360 MRFAP1Q9Y605 127 aa12.18□□□□□ -0.46
CHRNB1-208ENST00000576360 ERICH2A1L162 156 aa12.17□□□□□ -0.46
CHRNB1-208ENST00000576360 PPP2R3AQ06190 1150 aa12.17□□□□□ -0.46
CHRNB1-208ENST00000576360 MYBPC2Q14324 1141 aa12.17□□□□□ -0.46
CHRNB1-208ENST00000576360 GORABQ5T7V8 394 aa12.17□□□□□ -0.46
CHRNB1-208ENST00000576360 MAP1SQ66K74 1059 aaPredicted RBP12.17□□□□□ -0.46
CHRNB1-208ENST00000576360 MICALCLQ6ZW33 695 aa12.17□□□□□ -0.46
CHRNB1-208ENST00000576360 ZFAND2BQ8WV99 257 aa12.17□□□□□ -0.46
CHRNB1-208ENST00000576360 SPDL1Q96EA4 605 aa12.17□□□□□ -0.46
CHRNB1-208ENST00000576360 AGAP3Q96P47 875 aa12.17□□□□□ -0.46
CHRNB1-208ENST00000576360 NAT10Q9H0A0 1025 aaKnown RBP12.17□□□□□ -0.46
CHRNB1-208ENST00000576360 FZD9O00144 591 aa12.16□□□□□ -0.46
CHRNB1-208ENST00000576360 PPFIA3O75145 1194 aa12.16□□□□□ -0.46
CHRNB1-208ENST00000576360 KIAA0754O94854 1291 aa12.16□□□□□ -0.46
CHRNB1-208ENST00000576360 GCLCP48506 637 aaPredicted RBP12.16□□□□□ -0.46
CHRNB1-208ENST00000576360 IFFO1Q0D2I5 559 aa12.16□□□□□ -0.46
CHRNB1-208ENST00000576360 TCIRG1Q13488 830 aa12.16□□□□□ -0.46
CHRNB1-208ENST00000576360 CCDC178Q5BJE1 867 aa12.16□□□□□ -0.46
CHRNB1-208ENST00000576360 SPDYE1Q8NFV5 336 aaPredicted RBP12.16□□□□□ -0.46
CHRNB1-208ENST00000576360 FAM81AQ8TBF8 368 aa12.16□□□□□ -0.46
CHRNB1-208ENST00000576360 LMBR1Q8WVP7 490 aa12.16□□□□□ -0.46
CHRNB1-208ENST00000576360 MASTLQ96GX5 879 aa12.16□□□□□ -0.46
CHRNB1-208ENST00000576360 DDX20Q9UHI6 824 aaKnown RBP12.16□□□□□ -0.46
CHRNB1-208ENST00000576360 NIP7Q9Y221 180 aaKnown RBP eCLIP12.16□□□□□ -0.46
CHRNB1-208ENST00000576360 CARMIL3Q8ND23 1372 aa12.16□□□□□ -0.46
CHRNB1-208ENST00000576360 NEURL1BA8MQ27 555 aa12.16□□□□□ -0.46
CHRNB1-208ENST00000576360 MEFVO15553 781 aaPredicted RBP12.16□□□□□ -0.46
CHRNB1-208ENST00000576360 ZSCAN12O43309 604 aa12.16□□□□□ -0.46
CHRNB1-208ENST00000576360 PRPF6O94906 941 aaKnown RBP12.16□□□□□ -0.46
CHRNB1-208ENST00000576360 ROR2Q01974 943 aaKnown RBP12.16□□□□□ -0.46
CHRNB1-208ENST00000576360 FKBP4Q02790 459 aaKnown RBP eCLIP12.16□□□□□ -0.46
CHRNB1-208ENST00000576360 TMED1Q13445 227 aa12.16□□□□□ -0.46
CHRNB1-208ENST00000576360 ARID5BQ14865 1188 aa12.16□□□□□ -0.46
CHRNB1-208ENST00000576360 SUSD4Q5VX71 490 aa12.16□□□□□ -0.46
CHRNB1-208ENST00000576360 CWF19L1Q69YN2 538 aaKnown RBP12.16□□□□□ -0.46
CHRNB1-208ENST00000576360 PRPF40BQ6NWY9 871 aaKnown RBP12.16□□□□□ -0.46
CHRNB1-208ENST00000576360 ZNF34Q8IZ26 560 aa12.16□□□□□ -0.46
CHRNB1-208ENST00000576360 RTKN2Q8IZC4 609 aa12.16□□□□□ -0.46
CHRNB1-208ENST00000576360 MIPOL1Q8TD10 442 aa12.16□□□□□ -0.46
CHRNB1-208ENST00000576360 ISCA1Q9BUE6 129 aa12.16□□□□□ -0.46
CHRNB1-208ENST00000576360 CORO1CQ9ULV4 474 aaPredicted RBP12.16□□□□□ -0.46
CHRNB1-208ENST00000576360 ERVV-1B6SEH8 477 aa12.15□□□□□ -0.46
CHRNB1-208ENST00000576360 OPA1O60313 960 aa12.15□□□□□ -0.46
CHRNB1-208ENST00000576360 RAB11FIP3O75154 756 aa12.15□□□□□ -0.46
CHRNB1-208ENST00000576360 SRGNP10124 158 aa12.15□□□□□ -0.46
CHRNB1-208ENST00000576360 SYT1P21579 422 aa12.15□□□□□ -0.46
CHRNB1-208ENST00000576360 CCT5P48643 541 aa12.15□□□□□ -0.46
CHRNB1-208ENST00000576360 LAMB3Q13751 1172 aa12.15□□□□□ -0.46
CHRNB1-208ENST00000576360 NAA25Q14CX7 972 aa12.15□□□□□ -0.46
CHRNB1-208ENST00000576360 SNCBQ16143 134 aa12.15□□□□□ -0.46
CHRNB1-208ENST00000576360 CYP4F22Q6NT55 531 aa12.15□□□□□ -0.46
CHRNB1-208ENST00000576360 NLRP10Q86W26 655 aa12.15□□□□□ -0.46
CHRNB1-208ENST00000576360 C7orf43Q8WVR3 580 aa12.15□□□□□ -0.46
CHRNB1-208ENST00000576360 ZBTB10Q96DT7 871 aa12.15□□□□□ -0.46
CHRNB1-208ENST00000576360 DTNBP1Q96EV8 351 aa12.15□□□□□ -0.46
CHRNB1-208ENST00000576360 CLIC6Q96NY7 704 aa12.15□□□□□ -0.46
CHRNB1-208ENST00000576360 SAGE1Q9NXZ1 904 aa12.15□□□□□ -0.46
CHRNB1-208ENST00000576360 ZEB2O60315 1214 aa12.14□□□□□ -0.47
CHRNB1-208ENST00000576360 SFPQP23246 707 aaKnown RBP eCLIP12.14□□□□□ -0.47
CHRNB1-208ENST00000576360 CDR1P51861 262 aa12.14□□□□□ -0.47
CHRNB1-208ENST00000576360 CASP8Q14790 479 aa12.14□□□□□ -0.47
CHRNB1-208ENST00000576360 SLC30A9Q6PML9 568 aa12.14□□□□□ -0.47
CHRNB1-208ENST00000576360 USP50Q70EL3 339 aaPredicted RBP12.14□□□□□ -0.47
CHRNB1-208ENST00000576360 LINS1Q8NG48 757 aa12.14□□□□□ -0.47
CHRNB1-208ENST00000576360 SSH3Q8TE77 659 aa12.14□□□□□ -0.47
CHRNB1-208ENST00000576360 FAM89AQ96GI7 184 aa12.14□□□□□ -0.47
CHRNB1-208ENST00000576360 OSBPL3Q9H4L5 887 aa12.14□□□□□ -0.47
CHRNB1-208ENST00000576360 VCPKMTQ9H867 229 aa12.14□□□□□ -0.47
CHRNB1-208ENST00000576360 FIBPO43427 364 aa12.14□□□□□ -0.47
CHRNB1-208ENST00000576360 FERP16591 822 aa12.14□□□□□ -0.47
CHRNB1-208ENST00000576360 IRAK1P51617 712 aa12.14□□□□□ -0.47
CHRNB1-208ENST00000576360 NAP1L1P55209 391 aaKnown RBP12.14□□□□□ -0.47
CHRNB1-208ENST00000576360 SNX1Q13596 522 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms