RNA–Protein interactions for RNA: ENST00000575338.1

SMG6-217, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-217ENST00000575338 V9GY48 417 aaPredicted RBP7.79□□□□□ -1.16
SMG6-217ENST00000575338 SLX4Q8IY92 1834 aa7.78□□□□□ -1.16
SMG6-217ENST00000575338 GREB1LQ9C091 1923 aaPredicted RBP7.78□□□□□ -1.16
SMG6-217ENST00000575338 RASA1P20936 1047 aa7.78□□□□□ -1.16
SMG6-217ENST00000575338 FUT2Q10981 343 aa7.78□□□□□ -1.16
SMG6-217ENST00000575338 SEMA3FQ13275 785 aa7.78□□□□□ -1.16
SMG6-217ENST00000575338 SLC15A2Q16348 729 aa7.78□□□□□ -1.16
SMG6-217ENST00000575338 ASPRV1Q53RT3 343 aa7.78□□□□□ -1.16
SMG6-217ENST00000575338 SOGA3Q5TF21 947 aa7.78□□□□□ -1.16
SMG6-217ENST00000575338 ARL6IP4Q66PJ3 421 aaKnown RBP7.78□□□□□ -1.16
SMG6-217ENST00000575338 DRC7Q8IY82 874 aa7.78□□□□□ -1.16
SMG6-217ENST00000575338 DAGLBQ8NCG7 672 aa7.78□□□□□ -1.16
SMG6-217ENST00000575338 SLC16A10Q8TF71 515 aa7.78□□□□□ -1.16
SMG6-217ENST00000575338 ZNF622Q969S3 477 aaKnown RBP eCLIP7.78□□□□□ -1.16
SMG6-217ENST00000575338 RRP36Q96EU6 259 aaKnown RBP7.78□□□□□ -1.16
SMG6-217ENST00000575338 MRFAP1L1Q96HT8 127 aa7.78□□□□□ -1.16
SMG6-217ENST00000575338 TRIM34Q9BYJ4 488 aa7.78□□□□□ -1.16
SMG6-217ENST00000575338 FTOQ9C0B1 505 aaKnown RBP eCLIP7.78□□□□□ -1.16
SMG6-217ENST00000575338 DNAJC25Q9H1X3 360 aa7.78□□□□□ -1.16
SMG6-217ENST00000575338 EHD4Q9H223 541 aa7.78□□□□□ -1.16
SMG6-217ENST00000575338 CABP5Q9NP86 173 aa7.78□□□□□ -1.16
SMG6-217ENST00000575338 SERPINB13Q9UIV8 391 aa7.78□□□□□ -1.16
SMG6-217ENST00000575338 KCNH3Q9ULD8 1083 aa7.78□□□□□ -1.16
SMG6-217ENST00000575338 KCNJ14Q9UNX9 436 aa7.78□□□□□ -1.16
SMG6-217ENST00000575338 JAG2Q9Y219 1238 aa7.78□□□□□ -1.16
SMG6-217ENST00000575338 DAGLAQ9Y4D2 1042 aa7.78□□□□□ -1.16
SMG6-217ENST00000575338 ZNF646O15015 1829 aaPredicted RBP7.78□□□□□ -1.16
SMG6-217ENST00000575338 ARFGEF1Q9Y6D6 1849 aa7.78□□□□□ -1.16
SMG6-217ENST00000575338 COL2A1P02458 1487 aaPredicted RBP7.77□□□□□ -1.17
SMG6-217ENST00000575338 CCDC194A0A1B0GVG4 234 aa7.77□□□□□ -1.17
SMG6-217ENST00000575338 IKBKBO14920 756 aa7.77□□□□□ -1.17
SMG6-217ENST00000575338 RIMBP2O15034 1052 aa7.77□□□□□ -1.17
SMG6-217ENST00000575338 CBFA2T2O43439 604 aa7.77□□□□□ -1.17
SMG6-217ENST00000575338 PLEKHA8P1O95397 391 aa7.77□□□□□ -1.17
SMG6-217ENST00000575338 CYP2D6P10635 497 aa7.77□□□□□ -1.17
SMG6-217ENST00000575338 MARCKSP29966 332 aaPredicted RBP7.77□□□□□ -1.17
SMG6-217ENST00000575338 GUCY1A2P33402 732 aa7.77□□□□□ -1.17
SMG6-217ENST00000575338 BAG6P46379 1132 aa7.77□□□□□ -1.17
SMG6-217ENST00000575338 MMP14P50281 582 aa7.77□□□□□ -1.17
SMG6-217ENST00000575338 RHBDL3P58872 404 aa7.77□□□□□ -1.17
SMG6-217ENST00000575338 PKN1Q16512 942 aa7.77□□□□□ -1.17
SMG6-217ENST00000575338 TTC38Q5R3I4 469 aa7.77□□□□□ -1.17
SMG6-217ENST00000575338 RCSD1Q6JBY9 416 aa7.77□□□□□ -1.17
SMG6-217ENST00000575338 KRBA2Q6ZNG9 492 aa7.77□□□□□ -1.17
SMG6-217ENST00000575338 BLIDQ8IZY5 108 aa7.77□□□□□ -1.17
SMG6-217ENST00000575338 SRBD1Q8N5C6 995 aaKnown RBP7.77□□□□□ -1.17
SMG6-217ENST00000575338 ZDHHC15Q96MV8 337 aa7.77□□□□□ -1.17
SMG6-217ENST00000575338 GTPBP4Q9BZE4 634 aaKnown RBP7.77□□□□□ -1.17
SMG6-217ENST00000575338 GLT8D2Q9H1C3 349 aa7.77□□□□□ -1.17
SMG6-217ENST00000575338 C6orf50Q9HD87 102 aa7.77□□□□□ -1.17
SMG6-217ENST00000575338 GJB4Q9NTQ9 266 aa7.77□□□□□ -1.17
SMG6-217ENST00000575338 VPS54Q9P1Q0 977 aa7.77□□□□□ -1.17
SMG6-217ENST00000575338 TUBE1Q9UJT0 475 aa7.77□□□□□ -1.17
SMG6-217ENST00000575338 PCDHA4Q9UN74 947 aa7.77□□□□□ -1.17
SMG6-217ENST00000575338 KIF13BQ9NQT8 1826 aa7.77□□□□□ -1.17
SMG6-217ENST00000575338 SNED1Q8TER0 1413 aa7.77□□□□□ -1.17
SMG6-217ENST00000575338 ESYT2A0FGR8 921 aa7.76□□□□□ -1.17
SMG6-217ENST00000575338 USP17L3A6NCW0 530 aa7.76□□□□□ -1.17
SMG6-217ENST00000575338 USP17L4A6NCW7 530 aa7.76□□□□□ -1.17
SMG6-217ENST00000575338 PALM3A6NDB9 673 aaPredicted RBP7.76□□□□□ -1.17
SMG6-217ENST00000575338 KLRF2D3W0D1 207 aa7.76□□□□□ -1.17
SMG6-217ENST00000575338 WDHD1O75717 1129 aaPredicted RBP7.76□□□□□ -1.17
SMG6-217ENST00000575338 TTLL1O95922 423 aa7.76□□□□□ -1.17
SMG6-217ENST00000575338 MYL1P05976 194 aa7.76□□□□□ -1.17
SMG6-217ENST00000575338 HOXA7P31268 230 aaPredicted RBP7.76□□□□□ -1.17
SMG6-217ENST00000575338 LONP1P36776 959 aaKnown RBP7.76□□□□□ -1.17
SMG6-217ENST00000575338 NOVP48745 357 aa7.76□□□□□ -1.17
SMG6-217ENST00000575338 TERF1P54274 439 aa7.76□□□□□ -1.17
SMG6-217ENST00000575338 GSDMDP57764 484 aa7.76□□□□□ -1.17
SMG6-217ENST00000575338 TRAF1Q13077 416 aa7.76□□□□□ -1.17
SMG6-217ENST00000575338 IQCB1Q15051 598 aa7.76□□□□□ -1.17
SMG6-217ENST00000575338 GPATCH4Q5T3I0 446 aaKnown RBP7.76□□□□□ -1.17
SMG6-217ENST00000575338 MCTP2Q6DN12 878 aa7.76□□□□□ -1.17
SMG6-217ENST00000575338 PPP1R18Q6NYC8 613 aa7.76□□□□□ -1.17
SMG6-217ENST00000575338 SHC4Q6S5L8 630 aa7.76□□□□□ -1.17
SMG6-217ENST00000575338 USP17L1Q7RTZ2 530 aa7.76□□□□□ -1.17
SMG6-217ENST00000575338 KRT25Q7Z3Z0 450 aa7.76□□□□□ -1.17
SMG6-217ENST00000575338 LUZP1Q86V48 1076 aa7.76□□□□□ -1.17
SMG6-217ENST00000575338 PLA2G4DQ86XP0 818 aa7.76□□□□□ -1.17
SMG6-217ENST00000575338 TEX2Q8IWB9 1127 aa7.76□□□□□ -1.17
SMG6-217ENST00000575338 RTKN2Q8IZC4 609 aa7.76□□□□□ -1.17
SMG6-217ENST00000575338 NKX2-3Q8TAU0 364 aa7.76□□□□□ -1.17
SMG6-217ENST00000575338 DYNLL2Q96FJ2 89 aa7.76□□□□□ -1.17
SMG6-217ENST00000575338 GPR101Q96P66 508 aaPredicted RBP7.76□□□□□ -1.17
SMG6-217ENST00000575338 NAP1L4Q99733 375 aaKnown RBP7.76□□□□□ -1.17
SMG6-217ENST00000575338 TMEM47Q9BQJ4 181 aa7.76□□□□□ -1.17
SMG6-217ENST00000575338 OSBPL5Q9H0X9 879 aaPredicted RBP7.76□□□□□ -1.17
SMG6-217ENST00000575338 RRAGDQ9NQL2 400 aaPredicted RBP7.76□□□□□ -1.17
SMG6-217ENST00000575338 IL17RBQ9NRM6 502 aa7.76□□□□□ -1.17
SMG6-217ENST00000575338 USP40Q9NVE5 1235 aa7.76□□□□□ -1.17
SMG6-217ENST00000575338 BARHL2Q9NY43 387 aa7.76□□□□□ -1.17
SMG6-217ENST00000575338 TMOD2Q9NZR1 351 aa7.76□□□□□ -1.17
SMG6-217ENST00000575338 IMPACTQ9P2X3 320 aa7.76□□□□□ -1.17
SMG6-217ENST00000575338 SAP30BPQ9UHR5 308 aaKnown RBP7.76□□□□□ -1.17
SMG6-217ENST00000575338 MAD2L2Q9UI95 211 aa7.76□□□□□ -1.17
SMG6-217ENST00000575338 FBXO2Q9UK22 296 aaPredicted RBP7.76□□□□□ -1.17
SMG6-217ENST00000575338 SERPINA10Q9UK55 444 aa7.76□□□□□ -1.17
SMG6-217ENST00000575338 HDAC9Q9UKV0 1011 aa7.76□□□□□ -1.17
SMG6-217ENST00000575338 PRPHP41219 470 aa7.75□□□□□ -1.17
SMG6-217ENST00000575338 CRKP46108 304 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms