RNA–Protein interactions for RNA: ENST00000575156.5

ERCC4-207, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC4, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-207ENST00000575156 NBPF12Q5TAG4 269 aaPredicted RBP16.06■□□□□ 0.16
ERCC4-207ENST00000575156 IFFO2Q5TF58 517 aa16.06■□□□□ 0.16
ERCC4-207ENST00000575156 DLK2Q6UY11 383 aa16.06■□□□□ 0.16
ERCC4-207ENST00000575156 ALG1Q9BT22 464 aa16.06■□□□□ 0.16
ERCC4-207ENST00000575156 CPVLQ9H3G5 476 aa16.06■□□□□ 0.16
ERCC4-207ENST00000575156 ADARB2Q9NS39 739 aaKnown RBP16.06■□□□□ 0.16
ERCC4-207ENST00000575156 USP17L5A8MUK1 530 aa16.05■□□□□ 0.16
ERCC4-207ENST00000575156 TBC1D12O60347 775 aa16.05■□□□□ 0.16
ERCC4-207ENST00000575156 EEF2P13639 858 aaKnown RBP16.05■□□□□ 0.16
ERCC4-207ENST00000575156 FAM173BQ6P4H8 233 aa16.05■□□□□ 0.16
ERCC4-207ENST00000575156 CLEC17AQ6ZS10 378 aa16.05■□□□□ 0.16
ERCC4-207ENST00000575156 TMEM179Q6ZVK1 233 aa16.05■□□□□ 0.16
ERCC4-207ENST00000575156 PIBF1Q8WXW3 757 aa16.05■□□□□ 0.16
ERCC4-207ENST00000575156 MAP3K10Q02779 954 aa16.04■□□□□ 0.16
ERCC4-207ENST00000575156 DPY19L2Q6NUT2 758 aa16.04■□□□□ 0.16
ERCC4-207ENST00000575156 C8orf76Q96K31 380 aa16.04■□□□□ 0.16
ERCC4-207ENST00000575156 KIF3AQ9Y496 699 aa16.04■□□□□ 0.16
ERCC4-207ENST00000575156 V9GY48 417 aaPredicted RBP16.04■□□□□ 0.16
ERCC4-207ENST00000575156 CNTNAP5Q8WYK1 1306 aa16.04■□□□□ 0.16
ERCC4-207ENST00000575156 STK36Q9NRP7 1315 aa16.04■□□□□ 0.16
ERCC4-207ENST00000575156 PALM3A6NDB9 673 aaPredicted RBP16.04■□□□□ 0.16
ERCC4-207ENST00000575156 PDHBP11177 359 aa16.04■□□□□ 0.16
ERCC4-207ENST00000575156 ICA1Q05084 483 aa16.04■□□□□ 0.16
ERCC4-207ENST00000575156 PKN1Q16512 942 aa16.04■□□□□ 0.16
ERCC4-207ENST00000575156 MAP3K14Q99558 947 aa16.04■□□□□ 0.16
ERCC4-207ENST00000575156 KANSL2Q9H9L4 492 aa16.04■□□□□ 0.16
ERCC4-207ENST00000575156 FZD1Q9UP38 647 aa16.04■□□□□ 0.16
ERCC4-207ENST00000575156 FRMPD2Q68DX3 1309 aaPredicted RBP16.04■□□□□ 0.16
ERCC4-207ENST00000575156 PHF20L1A8MW92 1017 aa16.03■□□□□ 0.16
ERCC4-207ENST00000575156 VEGFAP15692 232 aaPredicted RBP16.03■□□□□ 0.16
ERCC4-207ENST00000575156 KIF5BP33176 963 aa16.03■□□□□ 0.16
ERCC4-207ENST00000575156 MCTP1Q6DN14 999 aa16.03■□□□□ 0.16
ERCC4-207ENST00000575156 CCDC84Q86UT8 332 aaPredicted RBP16.03■□□□□ 0.16
ERCC4-207ENST00000575156 APOBEC3FQ8IUX4 373 aaKnown RBP16.03■□□□□ 0.16
ERCC4-207ENST00000575156 TRIM22Q8IYM9 498 aa16.03■□□□□ 0.16
ERCC4-207ENST00000575156 FBXO18Q8NFZ0 1043 aa16.03■□□□□ 0.16
ERCC4-207ENST00000575156 SHISA4Q96DD7 197 aa16.03■□□□□ 0.16
ERCC4-207ENST00000575156 L3MBTL3Q96JM7 780 aaPredicted RBP16.03■□□□□ 0.16
ERCC4-207ENST00000575156 GBP4Q96PP9 640 aa16.03■□□□□ 0.16
ERCC4-207ENST00000575156 BAZ2BQ9UIF8 2168 aaKnown RBP16.03■□□□□ 0.16
ERCC4-207ENST00000575156 GLTPD2A6NH11 291 aa16.03■□□□□ 0.16
ERCC4-207ENST00000575156 CYTH3O43739 400 aa16.03■□□□□ 0.16
ERCC4-207ENST00000575156 RESTQ13127 1097 aa16.03■□□□□ 0.16
ERCC4-207ENST00000575156 RNF26Q9BY78 433 aaPredicted RBP16.03■□□□□ 0.16
ERCC4-207ENST00000575156 CABP5Q9NP86 173 aa16.03■□□□□ 0.16
ERCC4-207ENST00000575156 NYAP2Q9P242 653 aa16.03■□□□□ 0.16
ERCC4-207ENST00000575156 ZBTB21Q9ULJ3 1066 aa16.03■□□□□ 0.16
ERCC4-207ENST00000575156 A0A1W2PRG0 241 aa16.02■□□□□ 0.15
ERCC4-207ENST00000575156 CAP2P40123 477 aa16.02■□□□□ 0.15
ERCC4-207ENST00000575156 KLRF2D3W0D1 207 aa16.01■□□□□ 0.15
ERCC4-207ENST00000575156 PRPF3O43395 683 aaKnown RBP16.01■□□□□ 0.15
ERCC4-207ENST00000575156 RAD21O60216 631 aa16.01■□□□□ 0.15
ERCC4-207ENST00000575156 DEXIO95424 95 aa16.01■□□□□ 0.15
ERCC4-207ENST00000575156 PARP1P09874 1014 aaKnown RBP16.01■□□□□ 0.15
ERCC4-207ENST00000575156 SNHG28P0DPA3 235 aa16.01■□□□□ 0.15
ERCC4-207ENST00000575156 ACER1Q8TDN7 264 aa16.01■□□□□ 0.15
ERCC4-207ENST00000575156 MKL1Q969V6 931 aa16.01■□□□□ 0.15
ERCC4-207ENST00000575156 UBA5Q9GZZ9 404 aa16.01■□□□□ 0.15
ERCC4-207ENST00000575156 GDPD2Q9HCC8 539 aa16.01■□□□□ 0.15
ERCC4-207ENST00000575156 ECE1P42892 770 aa16.01■□□□□ 0.15
ERCC4-207ENST00000575156 DNM1Q05193 864 aaKnown RBP16.01■□□□□ 0.15
ERCC4-207ENST00000575156 KRT40Q6A162 431 aa16.01■□□□□ 0.15
ERCC4-207ENST00000575156 GPCPD1Q9NPB8 672 aa16.01■□□□□ 0.15
ERCC4-207ENST00000575156 KCNJ14Q9UNX9 436 aa16.01■□□□□ 0.15
ERCC4-207ENST00000575156 POTECB2RU33 542 aa16■□□□□ 0.15
ERCC4-207ENST00000575156 KIF28PB7ZC32 967 aa16■□□□□ 0.15
ERCC4-207ENST00000575156 PDIA4P13667 645 aaKnown RBP16■□□□□ 0.15
ERCC4-207ENST00000575156 EPHX2P34913 555 aa16■□□□□ 0.15
ERCC4-207ENST00000575156 AKAP17AQ02040 695 aaKnown RBP16■□□□□ 0.15
ERCC4-207ENST00000575156 TTBK2Q6IQ55 1244 aa16■□□□□ 0.15
ERCC4-207ENST00000575156 CNPY2Q9Y2B0 182 aa16■□□□□ 0.15
ERCC4-207ENST00000575156 ADM5C9JUS6 153 aa15.99■□□□□ 0.15
ERCC4-207ENST00000575156 INPP5BP32019 993 aa15.99■□□□□ 0.15
ERCC4-207ENST00000575156 KCTD1Q719H9 257 aa15.99■□□□□ 0.15
ERCC4-207ENST00000575156 GLIS2Q9BZE0 524 aaPredicted RBP15.99■□□□□ 0.15
ERCC4-207ENST00000575156 VPS54Q9P1Q0 977 aa15.99■□□□□ 0.15
ERCC4-207ENST00000575156 SSC5DA1L4H1 1573 aa15.99■□□□□ 0.15
ERCC4-207ENST00000575156 MYH4Q9Y623 1939 aa15.99■□□□□ 0.15
ERCC4-207ENST00000575156 GNAQP50148 359 aa15.99■□□□□ 0.15
ERCC4-207ENST00000575156 ZNF543Q08ER8 600 aa15.99■□□□□ 0.15
ERCC4-207ENST00000575156 KIAA1755Q5JYT7 1200 aa15.99■□□□□ 0.15
ERCC4-207ENST00000575156 WASF1Q92558 559 aa15.99■□□□□ 0.15
ERCC4-207ENST00000575156 NUP88Q99567 741 aaPredicted RBP15.99■□□□□ 0.15
ERCC4-207ENST00000575156 ZC3H4Q9UPT8 1303 aaKnown RBP15.99■□□□□ 0.15
ERCC4-207ENST00000575156 POLR2AP24928 1970 aaKnown RBP15.99■□□□□ 0.15
ERCC4-207ENST00000575156 F5H6K3 240 aa15.98■□□□□ 0.15
ERCC4-207ENST00000575156 KLRC3Q07444 240 aa15.98■□□□□ 0.15
ERCC4-207ENST00000575156 PPP4R3BQ5MIZ7 849 aa15.98■□□□□ 0.15
ERCC4-207ENST00000575156 SLFN13Q68D06 897 aa15.98■□□□□ 0.15
ERCC4-207ENST00000575156 PITPNM2Q9BZ72 1349 aa15.98■□□□□ 0.15
ERCC4-207ENST00000575156 VAT1LQ9HCJ6 419 aa15.98■□□□□ 0.15
ERCC4-207ENST00000575156 NDUFB10O96000 172 aa15.98■□□□□ 0.15
ERCC4-207ENST00000575156 NCLP19338 710 aaKnown RBP15.98■□□□□ 0.15
ERCC4-207ENST00000575156 SLC16A2P36021 539 aa15.98■□□□□ 0.15
ERCC4-207ENST00000575156 KIF23Q02241 960 aaPredicted RBP15.98■□□□□ 0.15
ERCC4-207ENST00000575156 CCDC96Q2M329 555 aa15.98■□□□□ 0.15
ERCC4-207ENST00000575156 GPKOWQ92917 476 aaPredicted RBP eCLIP15.98■□□□□ 0.15
ERCC4-207ENST00000575156 TAF1DQ9H5J8 278 aaPredicted RBP15.98■□□□□ 0.15
ERCC4-207ENST00000575156 SCG2P13521 617 aa15.97■□□□□ 0.15
ERCC4-207ENST00000575156 PRKG1Q13976 671 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms