RNA–Protein interactions for RNA: ENST00000574941.5

TRAP1-211, Transcript of TNF receptor associated protein 1, humanhuman

TSL 4

Gene TRAP1, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-211ENST00000574941 IMMTQ16891 758 aaKnown RBP23.26■■□□□ 1.31
TRAP1-211ENST00000574941 MFSD6Q6ZSS7 791 aa23.26■■□□□ 1.31
TRAP1-211ENST00000574941 ANKRD13CQ8N6S4 541 aa23.26■■□□□ 1.31
TRAP1-211ENST00000574941 STAG1Q8WVM7 1258 aa23.26■■□□□ 1.31
TRAP1-211ENST00000574941 ARHGAP39Q9C0H5 1083 aa23.26■■□□□ 1.31
TRAP1-211ENST00000574941 MCOLN1Q9GZU1 580 aa23.26■■□□□ 1.31
TRAP1-211ENST00000574941 RNF41Q9H4P4 317 aaPredicted RBP23.26■■□□□ 1.31
TRAP1-211ENST00000574941 MTMR4Q9NYA4 1195 aa23.26■■□□□ 1.31
TRAP1-211ENST00000574941 NYAP2Q9P242 653 aa23.26■■□□□ 1.31
TRAP1-211ENST00000574941 TRIM17Q9Y577 477 aa23.26■■□□□ 1.31
TRAP1-211ENST00000574941 GREB1LQ9C091 1923 aaPredicted RBP23.25■■□□□ 1.31
TRAP1-211ENST00000574941 HERVK_113P62684 666 aa23.25■■□□□ 1.31
TRAP1-211ENST00000574941 KIF22Q14807 665 aa23.25■■□□□ 1.31
TRAP1-211ENST00000574941 LPAR1Q92633 364 aa23.25■■□□□ 1.31
TRAP1-211ENST00000574941 ESYT1Q9BSJ8 1104 aa23.25■■□□□ 1.31
TRAP1-211ENST00000574941 TANGO6Q9C0B7 1094 aa23.25■■□□□ 1.31
TRAP1-211ENST00000574941 GOPCQ9HD26 462 aa23.25■■□□□ 1.31
TRAP1-211ENST00000574941 NMT2O60551 498 aa23.24■■□□□ 1.31
TRAP1-211ENST00000574941 CDC45O75419 566 aa23.24■■□□□ 1.31
TRAP1-211ENST00000574941 TTLL1O95922 423 aa23.24■■□□□ 1.31
TRAP1-211ENST00000574941 GCLCP48506 637 aaPredicted RBP23.24■■□□□ 1.31
TRAP1-211ENST00000574941 CATSPERGQ6ZRH7 1159 aa23.24■■□□□ 1.31
TRAP1-211ENST00000574941 OTOP1Q7RTM1 612 aa23.24■■□□□ 1.31
TRAP1-211ENST00000574941 EFCC1Q9HA90 598 aa23.24■■□□□ 1.31
TRAP1-211ENST00000574941 NEDD4P46934 1319 aa23.24■■□□□ 1.31
TRAP1-211ENST00000574941 PCP11498 1178 aaKnown RBP23.23■■□□□ 1.31
TRAP1-211ENST00000574941 KIAA1211Q6ZU35 1233 aa23.23■■□□□ 1.31
TRAP1-211ENST00000574941 LRRC47Q8N1G4 583 aaKnown RBP23.23■■□□□ 1.31
TRAP1-211ENST00000574941 U3KPZ7 1027 aaPredicted RBP23.23■■□□□ 1.31
TRAP1-211ENST00000574941 PEX10O60683 326 aa23.22■■□□□ 1.31
TRAP1-211ENST00000574941 ARHGEF6Q15052 776 aa23.22■■□□□ 1.31
TRAP1-211ENST00000574941 FAM110CQ1W6H9 321 aa23.22■■□□□ 1.31
TRAP1-211ENST00000574941 CASC1Q6TDU7 716 aa23.22■■□□□ 1.31
TRAP1-211ENST00000574941 IL17RBQ9NRM6 502 aa23.22■■□□□ 1.31
TRAP1-211ENST00000574941 STX8Q9UNK0 236 aa23.22■■□□□ 1.31
TRAP1-211ENST00000574941 WDR46O15213 610 aaKnown RBP23.21■■□□□ 1.31
TRAP1-211ENST00000574941 FMNL1O95466 1100 aaPredicted RBP23.21■■□□□ 1.31
TRAP1-211ENST00000574941 CTGFP29279 349 aa23.21■■□□□ 1.31
TRAP1-211ENST00000574941 PSMC4P43686 418 aa23.21■■□□□ 1.31
TRAP1-211ENST00000574941 NKX2-3Q8TAU0 364 aa23.21■■□□□ 1.31
TRAP1-211ENST00000574941 ESR2Q92731 530 aa23.21■■□□□ 1.31
TRAP1-211ENST00000574941 PAGR1Q9BTK6 254 aa23.21■■□□□ 1.31
TRAP1-211ENST00000574941 LAMA4Q16363 1823 aa23.2■■□□□ 1.3
TRAP1-211ENST00000574941 F5H6K3 240 aa23.2■■□□□ 1.3
TRAP1-211ENST00000574941 NDUFB10O96000 172 aa23.2■■□□□ 1.3
TRAP1-211ENST00000574941 KLRC3Q07444 240 aa23.2■■□□□ 1.3
TRAP1-211ENST00000574941 PKN2Q16513 984 aaKnown RBP23.2■■□□□ 1.3
TRAP1-211ENST00000574941 PPP4R3BQ5MIZ7 849 aa23.2■■□□□ 1.3
TRAP1-211ENST00000574941 FAM83BQ5T0W9 1011 aa23.2■■□□□ 1.3
TRAP1-211ENST00000574941 SAMD1Q6SPF0 538 aaPredicted RBP23.2■■□□□ 1.3
TRAP1-211ENST00000574941 GTF3C2Q8WUA4 911 aaPredicted RBP23.2■■□□□ 1.3
TRAP1-211ENST00000574941 MKL1Q969V6 931 aa23.2■■□□□ 1.3
TRAP1-211ENST00000574941 TRIM47Q96LD4 638 aa23.2■■□□□ 1.3
TRAP1-211ENST00000574941 NUP88Q99567 741 aaPredicted RBP23.2■■□□□ 1.3
TRAP1-211ENST00000574941 TXNRD2Q9NNW7 524 aa23.2■■□□□ 1.3
TRAP1-211ENST00000574941 ANO2Q9NQ90 1003 aa23.2■■□□□ 1.3
TRAP1-211ENST00000574941 SPDYE16A6NNV3 312 aaPredicted RBP23.19■■□□□ 1.3
TRAP1-211ENST00000574941 FLOT1O75955 427 aa23.19■■□□□ 1.3
TRAP1-211ENST00000574941 FCGRTP55899 365 aa23.19■■□□□ 1.3
TRAP1-211ENST00000574941 COG2Q14746 738 aa23.19■■□□□ 1.3
TRAP1-211ENST00000574941 MAP4K1Q92918 833 aa23.19■■□□□ 1.3
TRAP1-211ENST00000574941 LSG1Q9H089 658 aaKnown RBP23.19■■□□□ 1.3
TRAP1-211ENST00000574941 RBPJLQ9UBG7 517 aa23.19■■□□□ 1.3
TRAP1-211ENST00000574941 MORF4L1Q9UBU8 362 aa23.19■■□□□ 1.3
TRAP1-211ENST00000574941 RBM8AQ9Y5S9 174 aaKnown RBP23.19■■□□□ 1.3
TRAP1-211ENST00000574941 B4E1Z4 1266 aa23.18■■□□□ 1.3
TRAP1-211ENST00000574941 KDM4AO75164 1064 aa23.18■■□□□ 1.3
TRAP1-211ENST00000574941 POTEEQ6S8J3 1075 aa23.18■■□□□ 1.3
TRAP1-211ENST00000574941 GPRC5AQ8NFJ5 357 aa23.18■■□□□ 1.3
TRAP1-211ENST00000574941 SYNPO2Q9UMS6 1093 aa23.18■■□□□ 1.3
TRAP1-211ENST00000574941 ZSWIM8A7E2V4 1837 aa23.17■■□□□ 1.3
TRAP1-211ENST00000574941 CYP21A2P08686 494 aa23.17■■□□□ 1.3
TRAP1-211ENST00000574941 FBXO46Q6PJ61 603 aaPredicted RBP23.17■■□□□ 1.3
TRAP1-211ENST00000574941 GMCL1P1Q8NEA9 526 aa23.17■■□□□ 1.3
TRAP1-211ENST00000574941 CHMP4CQ96CF2 233 aa23.17■■□□□ 1.3
TRAP1-211ENST00000574941 ABHD8Q96I13 439 aa23.17■■□□□ 1.3
TRAP1-211ENST00000574941 FBXO28Q9NVF7 368 aa23.17■■□□□ 1.3
TRAP1-211ENST00000574941 HOXC10Q9NYD6 342 aa23.17■■□□□ 1.3
TRAP1-211ENST00000574941 ERVK-9P63128 1117 aa23.16■■□□□ 1.3
TRAP1-211ENST00000574941 ERVK-24P63145 666 aa23.16■■□□□ 1.3
TRAP1-211ENST00000574941 SLFN13Q68D06 897 aa23.16■■□□□ 1.3
TRAP1-211ENST00000574941 ZKSCAN3Q9BRR0 538 aa23.16■■□□□ 1.3
TRAP1-211ENST00000574941 KRT23Q9C075 422 aa23.16■■□□□ 1.3
TRAP1-211ENST00000574941 CNNM2Q9H8M5 875 aa23.16■■□□□ 1.3
TRAP1-211ENST00000574941 TCP11L1Q9NUJ3 509 aa23.16■■□□□ 1.3
TRAP1-211ENST00000574941 ISY1Q9ULR0 285 aaKnown RBP23.16■■□□□ 1.3
TRAP1-211ENST00000574941 PTPN22Q9Y2R2 807 aa23.16■■□□□ 1.3
TRAP1-211ENST00000574941 RABGAP1Q9Y3P9 1069 aa23.16■■□□□ 1.3
TRAP1-211ENST00000574941 TAF6LQ9Y6J9 622 aa23.16■■□□□ 1.3
TRAP1-211ENST00000574941 TNPO2O14787 897 aaKnown RBP23.15■■□□□ 1.3
TRAP1-211ENST00000574941 CNMDO75829 334 aa23.15■■□□□ 1.3
TRAP1-211ENST00000574941 GNRH1P01148 92 aa23.15■■□□□ 1.3
TRAP1-211ENST00000574941 DSG3P32926 999 aa23.15■■□□□ 1.3
TRAP1-211ENST00000574941 LBX2Q6XYB7 198 aa23.15■■□□□ 1.3
TRAP1-211ENST00000574941 ATG4CQ96DT6 458 aa23.15■■□□□ 1.3
TRAP1-211ENST00000574941 BTBD7Q9P203 1132 aa23.15■■□□□ 1.3
TRAP1-211ENST00000574941 MTMR7Q9Y216 660 aa23.15■■□□□ 1.3
TRAP1-211ENST00000574941 HOXD10P28358 340 aa23.14■■□□□ 1.29
TRAP1-211ENST00000574941 NOVP48745 357 aa23.14■■□□□ 1.29
TRAP1-211ENST00000574941 NT5C2P49902 561 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms