RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 CNMDO75829 334 aa12.65□□□□□ -0.38
LITAF-216ENST00000574848 INHAP05111 366 aa12.65□□□□□ -0.38
LITAF-216ENST00000574848 ELNP15502 786 aa12.65□□□□□ -0.38
LITAF-216ENST00000574848 ICA1Q05084 483 aa12.65□□□□□ -0.38
LITAF-216ENST00000574848 C8orf34Q49A92 452 aa12.65□□□□□ -0.38
LITAF-216ENST00000574848 UBE2Q1Q7Z7E8 422 aa12.65□□□□□ -0.38
LITAF-216ENST00000574848 SKAP1Q86WV1 359 aa12.65□□□□□ -0.38
LITAF-216ENST00000574848 SIAH1Q8IUQ4 282 aa12.65□□□□□ -0.38
LITAF-216ENST00000574848 SH2D4AQ9H788 454 aa12.65□□□□□ -0.38
LITAF-216ENST00000574848 PAK6Q9NQU5 681 aaPredicted RBP12.65□□□□□ -0.38
LITAF-216ENST00000574848 TMX2Q9Y320 296 aa12.65□□□□□ -0.38
LITAF-216ENST00000574848 M0R2C6 588 aa12.64□□□□□ -0.39
LITAF-216ENST00000574848 MPHOSPH10O00566 681 aaKnown RBP12.64□□□□□ -0.39
LITAF-216ENST00000574848 HMGCRP04035 888 aa12.64□□□□□ -0.39
LITAF-216ENST00000574848 XRCC5P13010 732 aaKnown RBP12.64□□□□□ -0.39
LITAF-216ENST00000574848 ZMYM1Q5SVZ6 1142 aa12.64□□□□□ -0.39
LITAF-216ENST00000574848 ANKRD45Q5TZF3 282 aa12.64□□□□□ -0.39
LITAF-216ENST00000574848 TICAM2Q86XR7 235 aa12.64□□□□□ -0.39
LITAF-216ENST00000574848 USP6NLQ92738 828 aa12.64□□□□□ -0.39
LITAF-216ENST00000574848 PORCNQ9H237 461 aa12.64□□□□□ -0.39
LITAF-216ENST00000574848 RPAP3Q9H6T3 665 aaPredicted RBP12.64□□□□□ -0.39
LITAF-216ENST00000574848 ARHGEF10LQ9HCE6 1279 aa12.64□□□□□ -0.39
LITAF-216ENST00000574848 PLIN4Q96Q06 1357 aa12.64□□□□□ -0.39
LITAF-216ENST00000574848 PEX10O60683 326 aa12.63□□□□□ -0.39
LITAF-216ENST00000574848 MYCP01106 439 aaPredicted RBP12.63□□□□□ -0.39
LITAF-216ENST00000574848 Q3C1V9 767 aa12.63□□□□□ -0.39
LITAF-216ENST00000574848 KIAA1755Q5JYT7 1200 aa12.63□□□□□ -0.39
LITAF-216ENST00000574848 MORN1Q5T089 497 aa12.63□□□□□ -0.39
LITAF-216ENST00000574848 GPR142Q7Z601 462 aa12.63□□□□□ -0.39
LITAF-216ENST00000574848 CLEC10AQ8IUN9 316 aa12.63□□□□□ -0.39
LITAF-216ENST00000574848 PAGR1Q9BTK6 254 aa12.63□□□□□ -0.39
LITAF-216ENST00000574848 FSD1Q9BTV5 496 aa12.63□□□□□ -0.39
LITAF-216ENST00000574848 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.63□□□□□ -0.39
LITAF-216ENST00000574848 RNF208Q9H0X6 261 aa12.63□□□□□ -0.39
LITAF-216ENST00000574848 UNC93B1Q9H1C4 597 aa12.63□□□□□ -0.39
LITAF-216ENST00000574848 VCPKMTQ9H867 229 aa12.63□□□□□ -0.39
LITAF-216ENST00000574848 KANSL2Q9H9L4 492 aa12.63□□□□□ -0.39
LITAF-216ENST00000574848 BIN2Q9UBW5 565 aaPredicted RBP12.63□□□□□ -0.39
LITAF-216ENST00000574848 WDR46O15213 610 aaKnown RBP12.62□□□□□ -0.39
LITAF-216ENST00000574848 RASA1P20936 1047 aa12.62□□□□□ -0.39
LITAF-216ENST00000574848 PDE1AP54750 535 aa12.62□□□□□ -0.39
LITAF-216ENST00000574848 CCNA1P78396 465 aa12.62□□□□□ -0.39
LITAF-216ENST00000574848 MAP3K21Q5TCX8 1036 aa12.62□□□□□ -0.39
LITAF-216ENST00000574848 TRMT44Q8IYL2 757 aaKnown RBP12.62□□□□□ -0.39
LITAF-216ENST00000574848 U2AF1L4Q8WU68 220 aaKnown RBP12.62□□□□□ -0.39
LITAF-216ENST00000574848 TRIB2Q92519 343 aa12.62□□□□□ -0.39
LITAF-216ENST00000574848 NUDT12Q9BQG2 462 aa12.62□□□□□ -0.39
LITAF-216ENST00000574848 LNPKQ9C0E8 428 aa12.62□□□□□ -0.39
LITAF-216ENST00000574848 CRISPLD2Q9H0B8 497 aa12.62□□□□□ -0.39
LITAF-216ENST00000574848 BTBD7Q9P203 1132 aa12.62□□□□□ -0.39
LITAF-216ENST00000574848 COL11A1P12107 1806 aaPredicted RBP12.61□□□□□ -0.39
LITAF-216ENST00000574848 FRMPD3Q5JV73 1810 aa12.61□□□□□ -0.39
LITAF-216ENST00000574848 IGKV6D-41A0A0C4DH26 115 aa12.61□□□□□ -0.39
LITAF-216ENST00000574848 PATL2C9JE40 543 aaKnown RBP12.61□□□□□ -0.39
LITAF-216ENST00000574848 FOXP2O15409 715 aa12.61□□□□□ -0.39
LITAF-216ENST00000574848 SGPL1O95470 568 aa12.61□□□□□ -0.39
LITAF-216ENST00000574848 COG2Q14746 738 aa12.61□□□□□ -0.39
LITAF-216ENST00000574848 PLEKHH3Q7Z736 793 aa12.61□□□□□ -0.39
LITAF-216ENST00000574848 MB21D1Q8N884 522 aa12.61□□□□□ -0.39
LITAF-216ENST00000574848 EVI5LQ96CN4 794 aa12.61□□□□□ -0.39
LITAF-216ENST00000574848 IPO9Q96P70 1041 aaKnown RBP12.61□□□□□ -0.39
LITAF-216ENST00000574848 SEC62Q99442 399 aaKnown RBP12.61□□□□□ -0.39
LITAF-216ENST00000574848 APBA2Q99767 749 aa12.61□□□□□ -0.39
LITAF-216ENST00000574848 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.61□□□□□ -0.393e-7■■□□□ 13.1
LITAF-216ENST00000574848 SYNPO2Q9UMS6 1093 aa12.61□□□□□ -0.39
LITAF-216ENST00000574848 MYH4Q9Y623 1939 aa12.6□□□□□ -0.39
LITAF-216ENST00000574848 HOXC6P09630 235 aa12.6□□□□□ -0.39
LITAF-216ENST00000574848 EEF2P13639 858 aaKnown RBP12.6□□□□□ -0.39
LITAF-216ENST00000574848 RGS2P41220 211 aa12.6□□□□□ -0.39
LITAF-216ENST00000574848 TDO2P48775 406 aa12.6□□□□□ -0.39
LITAF-216ENST00000574848 GRB14Q14449 540 aa12.6□□□□□ -0.39
LITAF-216ENST00000574848 BMP2KLQ5H9B9 411 aa12.6□□□□□ -0.39
LITAF-216ENST00000574848 IFNL3Q8IZI9 196 aa12.6□□□□□ -0.39
LITAF-216ENST00000574848 SHCBP1Q8NEM2 672 aa12.6□□□□□ -0.39
LITAF-216ENST00000574848 NACAP1Q9BZK3 213 aa12.6□□□□□ -0.39
LITAF-216ENST00000574848 TANGO6Q9C0B7 1094 aa12.6□□□□□ -0.39
LITAF-216ENST00000574848 ZNF287Q9HBT7 754 aa12.6□□□□□ -0.39
LITAF-216ENST00000574848 HOXC10Q9NYD6 342 aa12.6□□□□□ -0.39
LITAF-216ENST00000574848 RPTORQ8N122 1335 aa12.6□□□□□ -0.39
LITAF-216ENST00000574848 SLC15A5A6NIM6 579 aa12.59□□□□□ -0.39
LITAF-216ENST00000574848 IGHA2P01877 340 aa12.59□□□□□ -0.39
LITAF-216ENST00000574848 ZKSCAN1P17029 563 aaPredicted RBP12.59□□□□□ -0.39
LITAF-216ENST00000574848 PTPREP23469 700 aa12.59□□□□□ -0.39
LITAF-216ENST00000574848 DSG3P32926 999 aa12.59□□□□□ -0.39
LITAF-216ENST00000574848 MAP2K5Q13163 448 aa12.59□□□□□ -0.39
LITAF-216ENST00000574848 SPATC1LQ9H0A9 340 aa12.59□□□□□ -0.39
LITAF-216ENST00000574848 OSBPL3Q9H4L5 887 aa12.59□□□□□ -0.39
LITAF-216ENST00000574848 GOPCQ9HD26 462 aa12.59□□□□□ -0.39
LITAF-216ENST00000574848 NYAP2Q9P242 653 aa12.59□□□□□ -0.39
LITAF-216ENST00000574848 ADAMTS5Q9UNA0 930 aa12.59□□□□□ -0.39
LITAF-216ENST00000574848 ZMYM6O95789 1325 aa12.59□□□□□ -0.39
LITAF-216ENST00000574848 MINDY4BA8MYZ0 360 aa12.58□□□□□ -0.4
LITAF-216ENST00000574848 FLOT1O75955 427 aa12.58□□□□□ -0.4
LITAF-216ENST00000574848 FARP2O94887 1054 aaPredicted RBP12.58□□□□□ -0.4
LITAF-216ENST00000574848 CYP2B6P20813 491 aa12.58□□□□□ -0.4
LITAF-216ENST00000574848 TRIM32Q13049 653 aa12.58□□□□□ -0.4
LITAF-216ENST00000574848 CCAR1Q8IX12 1150 aaKnown RBP12.58□□□□□ -0.4
LITAF-216ENST00000574848 SPICE1Q8N0Z3 855 aa12.58□□□□□ -0.4
LITAF-216ENST00000574848 ANKLE1Q8NAG6 615 aa12.58□□□□□ -0.4
LITAF-216ENST00000574848 ATG4CQ96DT6 458 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms