RNA–Protein interactions for RNA: ENST00000574781.1

ERCC4-206, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 3

Gene ERCC4, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-206ENST00000574781 PPP4CP60510 307 aa9.74□□□□□ -0.85
ERCC4-206ENST00000574781 ZYXQ15942 572 aaKnown RBP9.74□□□□□ -0.85
ERCC4-206ENST00000574781 Q3C1V9 767 aa9.74□□□□□ -0.85
ERCC4-206ENST00000574781 SH3D19Q5HYK7 790 aa9.74□□□□□ -0.85
ERCC4-206ENST00000574781 ZKSCAN2Q63HK3 967 aa9.74□□□□□ -0.85
ERCC4-206ENST00000574781 THSD4Q6ZMP0 1018 aa9.74□□□□□ -0.85
ERCC4-206ENST00000574781 NECAB2Q7Z6G3 386 aa9.74□□□□□ -0.85
ERCC4-206ENST00000574781 CCAR1Q8IX12 1150 aaKnown RBP9.74□□□□□ -0.85
ERCC4-206ENST00000574781 C7orf61Q8IZ16 206 aa9.74□□□□□ -0.85
ERCC4-206ENST00000574781 PAGR1Q9BTK6 254 aa9.74□□□□□ -0.85
ERCC4-206ENST00000574781 WDR18Q9BV38 432 aa9.74□□□□□ -0.85
ERCC4-206ENST00000574781 DHX36Q9H2U1 1008 aaKnown RBP9.74□□□□□ -0.85
ERCC4-206ENST00000574781 DNAJC18Q9H819 358 aa9.74□□□□□ -0.85
ERCC4-206ENST00000574781 TXNRD2Q9NNW7 524 aa9.74□□□□□ -0.85
ERCC4-206ENST00000574781 HMX1Q9NP08 348 aaPredicted RBP9.74□□□□□ -0.85
ERCC4-206ENST00000574781 TLR7Q9NYK1 1049 aaKnown RBP9.74□□□□□ -0.85
ERCC4-206ENST00000574781 ZMYND8Q9ULU4 1186 aaPredicted RBP9.74□□□□□ -0.85
ERCC4-206ENST00000574781 A0A0C4DFX4 3053 aa9.74□□□□□ -0.85
ERCC4-206ENST00000574781 LAMA3Q16787 3333 aa9.74□□□□□ -0.85
ERCC4-206ENST00000574781 DOCK2Q92608 1830 aa9.73□□□□□ -0.85
ERCC4-206ENST00000574781 USP17L10C9JJH3 530 aa9.73□□□□□ -0.85
ERCC4-206ENST00000574781 IDH1O75874 414 aaKnown RBP9.73□□□□□ -0.85
ERCC4-206ENST00000574781 HMGCRP04035 888 aa9.73□□□□□ -0.85
ERCC4-206ENST00000574781 ASNSP08243 561 aa9.73□□□□□ -0.85
ERCC4-206ENST00000574781 SYN1P17600 705 aa9.73□□□□□ -0.85
ERCC4-206ENST00000574781 HERVK_113P62684 666 aa9.73□□□□□ -0.85
ERCC4-206ENST00000574781 GPRC5AQ8NFJ5 357 aa9.73□□□□□ -0.85
ERCC4-206ENST00000574781 SSH3Q8TE77 659 aa9.73□□□□□ -0.85
ERCC4-206ENST00000574781 EAF2Q96CJ1 260 aaPredicted RBP9.73□□□□□ -0.85
ERCC4-206ENST00000574781 LRCH3Q96II8 777 aa9.73□□□□□ -0.85
ERCC4-206ENST00000574781 TBC1D2Q9BYX2 928 aa9.73□□□□□ -0.85
ERCC4-206ENST00000574781 PRO3102Q9H379 93 aa9.73□□□□□ -0.85
ERCC4-206ENST00000574781 GPR108Q9NPR9 543 aa9.73□□□□□ -0.85
ERCC4-206ENST00000574781 RBPJLQ9UBG7 517 aa9.73□□□□□ -0.85
ERCC4-206ENST00000574781 FLT1P17948 1338 aa9.73□□□□□ -0.85
ERCC4-206ENST00000574781 RPTORQ8N122 1335 aa9.73□□□□□ -0.85
ERCC4-206ENST00000574781 COL6A3P12111 3177 aa9.72□□□□□ -0.85
ERCC4-206ENST00000574781 C19orf81C9J6K1 198 aa9.72□□□□□ -0.85
ERCC4-206ENST00000574781 SOX1O00570 391 aaPredicted RBP9.72□□□□□ -0.85
ERCC4-206ENST00000574781 GH2P01242 217 aa9.72□□□□□ -0.85
ERCC4-206ENST00000574781 HOXA7P31268 230 aaPredicted RBP9.72□□□□□ -0.85
ERCC4-206ENST00000574781 USP5P45974 858 aa9.72□□□□□ -0.85
ERCC4-206ENST00000574781 PTGDRQ13258 359 aa9.72□□□□□ -0.85
ERCC4-206ENST00000574781 RAB3GAP1Q15042 981 aa9.72□□□□□ -0.85
ERCC4-206ENST00000574781 CCL14Q16627 93 aa9.72□□□□□ -0.85
ERCC4-206ENST00000574781 ITPRIPQ8IWB1 547 aa9.72□□□□□ -0.85
ERCC4-206ENST00000574781 FTSJ3Q8IY81 847 aaKnown RBP9.72□□□□□ -0.85
ERCC4-206ENST00000574781 MAGEB6Q8N7X4 407 aa9.72□□□□□ -0.85
ERCC4-206ENST00000574781 TRIB2Q92519 343 aa9.72□□□□□ -0.85
ERCC4-206ENST00000574781 NUDT12Q9BQG2 462 aa9.72□□□□□ -0.85
ERCC4-206ENST00000574781 PORCNQ9H237 461 aa9.72□□□□□ -0.85
ERCC4-206ENST00000574781 ANTXR1Q9H6X2 564 aa9.72□□□□□ -0.85
ERCC4-206ENST00000574781 CWC22Q9HCG8 908 aaKnown RBP9.72□□□□□ -0.85
ERCC4-206ENST00000574781 MORF4L1Q9UBU8 362 aa9.72□□□□□ -0.85
ERCC4-206ENST00000574781 DBNLQ9UJU6 430 aaKnown RBP9.72□□□□□ -0.85
ERCC4-206ENST00000574781 ZBTB21Q9ULJ3 1066 aa9.72□□□□□ -0.85
ERCC4-206ENST00000574781 MGAMO43451 1857 aa9.72□□□□□ -0.85
ERCC4-206ENST00000574781 DOCK3Q8IZD9 2030 aa9.72□□□□□ -0.85
ERCC4-206ENST00000574781 DNAH12Q6ZR08 3092 aa9.71□□□□□ -0.85
ERCC4-206ENST00000574781 PHIPQ8WWQ0 1821 aa9.71□□□□□ -0.85
ERCC4-206ENST00000574781 DOCK1Q14185 1865 aa9.71□□□□□ -0.85
ERCC4-206ENST00000574781 HLA-DOAP06340 250 aa9.71□□□□□ -0.86
ERCC4-206ENST00000574781 RLBP1P12271 317 aa9.71□□□□□ -0.86
ERCC4-206ENST00000574781 WDR78Q5VTH9 848 aa9.71□□□□□ -0.86
ERCC4-206ENST00000574781 METTL16Q86W50 562 aaKnown RBP9.71□□□□□ -0.86
ERCC4-206ENST00000574781 WNT2BQ93097 391 aa9.71□□□□□ -0.86
ERCC4-206ENST00000574781 APBB1O00213 710 aa9.7□□□□□ -0.86
ERCC4-206ENST00000574781 CCND3P30281 292 aaPredicted RBP9.7□□□□□ -0.86
ERCC4-206ENST00000574781 ERVK-9P63128 1117 aa9.7□□□□□ -0.86
ERCC4-206ENST00000574781 ERVK-24P63145 666 aa9.7□□□□□ -0.86
ERCC4-206ENST00000574781 HNRNPUQ00839 825 aaKnown RBP eCLIP9.7□□□□□ -0.86
ERCC4-206ENST00000574781 CACNB2Q08289 660 aaPredicted RBP9.7□□□□□ -0.86
ERCC4-206ENST00000574781 PDE3AQ14432 1141 aa9.7□□□□□ -0.86
ERCC4-206ENST00000574781 USP17L2Q6R6M4 530 aa9.7□□□□□ -0.86
ERCC4-206ENST00000574781 ACER1Q8TDN7 264 aa9.7□□□□□ -0.86
ERCC4-206ENST00000574781 ZNF512BQ96KM6 892 aaPredicted RBP9.7□□□□□ -0.86
ERCC4-206ENST00000574781 ZFRQ96KR1 1074 aaKnown RBP9.7□□□□□ -0.86
ERCC4-206ENST00000574781 FEZ1Q99689 392 aa9.7□□□□□ -0.86
ERCC4-206ENST00000574781 C11orf49Q9H6J7 331 aa9.7□□□□□ -0.86
ERCC4-206ENST00000574781 EXOC6BQ9Y2D4 811 aa9.7□□□□□ -0.86
ERCC4-206ENST00000574781 NOP58Q9Y2X3 529 aaKnown RBP9.7□□□□□ -0.86
ERCC4-206ENST00000574781 COL2A1P02458 1487 aaPredicted RBP9.69□□□□□ -0.86
ERCC4-206ENST00000574781 PTPRFP10586 1907 aa9.69□□□□□ -0.86
ERCC4-206ENST00000574781 ZKSCAN1P17029 563 aaPredicted RBP9.69□□□□□ -0.86
ERCC4-206ENST00000574781 MAPK4P31152 587 aa9.69□□□□□ -0.86
ERCC4-206ENST00000574781 PLCD1P51178 756 aa9.69□□□□□ -0.86
ERCC4-206ENST00000574781 CERKLQ49MI3 558 aaPredicted RBP9.69□□□□□ -0.86
ERCC4-206ENST00000574781 GPR142Q7Z601 462 aa9.69□□□□□ -0.86
ERCC4-206ENST00000574781 PLEKHH3Q7Z736 793 aa9.69□□□□□ -0.86
ERCC4-206ENST00000574781 AACSQ86V21 672 aa9.69□□□□□ -0.86
ERCC4-206ENST00000574781 ANKLE1Q8NAG6 615 aa9.69□□□□□ -0.86
ERCC4-206ENST00000574781 SLC17A8Q8NDX2 589 aa9.69□□□□□ -0.86
ERCC4-206ENST00000574781 ANKK1Q8NFD2 765 aa9.69□□□□□ -0.86
ERCC4-206ENST00000574781 PANK1Q8TE04 598 aa9.69□□□□□ -0.86
ERCC4-206ENST00000574781 EDC3Q96F86 508 aaKnown RBP9.69□□□□□ -0.86
ERCC4-206ENST00000574781 IL1RAPL2Q9NP60 686 aa9.69□□□□□ -0.86
ERCC4-206ENST00000574781 OGDHLQ9ULD0 1010 aa9.69□□□□□ -0.86
ERCC4-206ENST00000574781 LAMA2P24043 3122 aaKnown RBP9.68□□□□□ -0.86
ERCC4-206ENST00000574781 SOWAHBA6NEL2 793 aa9.68□□□□□ -0.86
ERCC4-206ENST00000574781 USP17L15C9J2P7 530 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms