RNA–Protein interactions for RNA: ENST00000574234.1

TRIM25-208, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-208ENST00000574234 RNF20Q5VTR2 975 aa6.65□□□□□ -1.34
TRIM25-208ENST00000574234 SH3RF1Q7Z6J0 888 aa6.65□□□□□ -1.34
TRIM25-208ENST00000574234 MRPL50Q8N5N7 158 aaKnown RBP6.65□□□□□ -1.34
TRIM25-208ENST00000574234 COL26A1Q96A83 441 aa6.65□□□□□ -1.34
TRIM25-208ENST00000574234 PARK7Q99497 189 aaKnown RBP6.65□□□□□ -1.34
TRIM25-208ENST00000574234 BCL11AQ9H165 835 aa6.65□□□□□ -1.34
TRIM25-208ENST00000574234 LOC285556D6RIA3 1793 aa6.64□□□□□ -1.35
TRIM25-208ENST00000574234 DOCK1Q14185 1865 aa6.64□□□□□ -1.35
TRIM25-208ENST00000574234 TK2O00142 265 aa6.64□□□□□ -1.35
TRIM25-208ENST00000574234 TNPO2O14787 897 aaKnown RBP6.64□□□□□ -1.35
TRIM25-208ENST00000574234 P4HBP07237 508 aaKnown RBP6.64□□□□□ -1.35
TRIM25-208ENST00000574234 ERCC5P28715 1186 aaPredicted RBP6.64□□□□□ -1.35
TRIM25-208ENST00000574234 CCT4P50991 539 aaKnown RBP6.64□□□□□ -1.35
TRIM25-208ENST00000574234 PPP4CP60510 307 aa6.64□□□□□ -1.35
TRIM25-208ENST00000574234 FKBP1AP62942 108 aaKnown RBP6.64□□□□□ -1.35
TRIM25-208ENST00000574234 HDLBPQ00341 1268 aaKnown RBP6.64□□□□□ -1.35
TRIM25-208ENST00000574234 FOXK2Q01167 660 aa6.64□□□□□ -1.35
TRIM25-208ENST00000574234 USP4Q13107 963 aa6.64□□□□□ -1.35
TRIM25-208ENST00000574234 TMEM31Q5JXX7 168 aa6.64□□□□□ -1.35
TRIM25-208ENST00000574234 AKNAD1Q5T1N1 836 aa6.64□□□□□ -1.35
TRIM25-208ENST00000574234 ANKRD18AQ8IVF6 992 aa6.64□□□□□ -1.35
TRIM25-208ENST00000574234 TSEN2Q8NCE0 465 aaKnown RBP6.64□□□□□ -1.35
TRIM25-208ENST00000574234 XAGE3Q8WTP9 111 aa6.64□□□□□ -1.35
TRIM25-208ENST00000574234 SPATA32Q96LK8 384 aa6.64□□□□□ -1.35
TRIM25-208ENST00000574234 RBCK1Q9BYM8 510 aa6.64□□□□□ -1.35
TRIM25-208ENST00000574234 KCNH4Q9UQ05 1017 aa6.64□□□□□ -1.35
TRIM25-208ENST00000574234 LEMD3Q9Y2U8 911 aa6.64□□□□□ -1.35
TRIM25-208ENST00000574234 PCDHAC2Q9Y5I4 1007 aa6.64□□□□□ -1.35
TRIM25-208ENST00000574234 SCAMP3O14828 347 aaKnown RBP6.63□□□□□ -1.35
TRIM25-208ENST00000574234 ANXA1P04083 346 aa6.63□□□□□ -1.35
TRIM25-208ENST00000574234 TNNI2P48788 182 aa6.63□□□□□ -1.35
TRIM25-208ENST00000574234 MYO9BQ13459 2157 aa6.63□□□□□ -1.35
TRIM25-208ENST00000574234 MOGSQ13724 837 aa6.63□□□□□ -1.35
TRIM25-208ENST00000574234 SHHQ15465 462 aa6.63□□□□□ -1.35
TRIM25-208ENST00000574234 LRRC26Q2I0M4 334 aa6.63□□□□□ -1.35
TRIM25-208ENST00000574234 PTCRAQ6ISU1 281 aaPredicted RBP6.63□□□□□ -1.35
TRIM25-208ENST00000574234 TXNRD3Q86VQ6 643 aa6.63□□□□□ -1.35
TRIM25-208ENST00000574234 CERS5Q8N5B7 392 aa6.63□□□□□ -1.35
TRIM25-208ENST00000574234 ZBTB38Q8NAP3 1195 aaPredicted RBP6.63□□□□□ -1.35
TRIM25-208ENST00000574234 PLBD2Q8NHP8 589 aa6.63□□□□□ -1.35
TRIM25-208ENST00000574234 HELQQ8TDG4 1101 aa6.63□□□□□ -1.35
TRIM25-208ENST00000574234 HOOK2Q96ED9 719 aa6.63□□□□□ -1.35
TRIM25-208ENST00000574234 SPSB2Q99619 263 aa6.63□□□□□ -1.35
TRIM25-208ENST00000574234 PRDM9Q9NQV7 894 aa6.63□□□□□ -1.35
TRIM25-208ENST00000574234 MYH13Q9UKX3 1938 aa6.63□□□□□ -1.35
TRIM25-208ENST00000574234 MINPP1Q9UNW1 487 aa6.63□□□□□ -1.35
TRIM25-208ENST00000574234 ATAD5Q96QE3 1844 aa6.62□□□□□ -1.35
TRIM25-208ENST00000574234 TRANK1O15050 2925 aa6.62□□□□□ -1.35
TRIM25-208ENST00000574234 CHD9Q3L8U1 2897 aa6.62□□□□□ -1.35
TRIM25-208ENST00000574234 AOX1Q06278 1338 aa6.62□□□□□ -1.35
TRIM25-208ENST00000574234 ESPNB1AK53 854 aa6.62□□□□□ -1.35
TRIM25-208ENST00000574234 SMARCA5O60264 1052 aaPredicted RBP6.62□□□□□ -1.35
TRIM25-208ENST00000574234 PDE8AO60658 829 aa6.62□□□□□ -1.35
TRIM25-208ENST00000574234 AIMP1Q12904 312 aaKnown RBP6.62□□□□□ -1.35
TRIM25-208ENST00000574234 GRIN2CQ14957 1233 aa6.62□□□□□ -1.35
TRIM25-208ENST00000574234 MAP3K21Q5TCX8 1036 aa6.62□□□□□ -1.35
TRIM25-208ENST00000574234 TMC7Q7Z402 723 aa6.62□□□□□ -1.35
TRIM25-208ENST00000574234 CDAN1Q8IWY9 1227 aa6.62□□□□□ -1.35
TRIM25-208ENST00000574234 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.62□□□□□ -1.35
TRIM25-208ENST00000574234 SP7Q8TDD2 431 aaPredicted RBP6.62□□□□□ -1.35
TRIM25-208ENST00000574234 COA7Q96BR5 231 aa6.62□□□□□ -1.35
TRIM25-208ENST00000574234 WRNIP1Q96S55 665 aa6.62□□□□□ -1.35
TRIM25-208ENST00000574234 CDC5LQ99459 802 aaKnown RBP6.62□□□□□ -1.35
TRIM25-208ENST00000574234 BSDC1Q9NW68 430 aaPredicted RBP6.62□□□□□ -1.35
TRIM25-208ENST00000574234 SLC45A1Q9Y2W3 748 aa6.62□□□□□ -1.35
TRIM25-208ENST00000574234 RPAP1Q9BWH6 1393 aaPredicted RBP6.61□□□□□ -1.35
TRIM25-208ENST00000574234 SOWAHBA6NEL2 793 aa6.61□□□□□ -1.35
TRIM25-208ENST00000574234 TREHO43280 583 aa6.61□□□□□ -1.35
TRIM25-208ENST00000574234 FAM13AO94988 1023 aa6.61□□□□□ -1.35
TRIM25-208ENST00000574234 U2AF1L5P0DN76 240 aaPredicted RBP6.61□□□□□ -1.35
TRIM25-208ENST00000574234 CYP2C8P10632 490 aa6.61□□□□□ -1.35
TRIM25-208ENST00000574234 BMP1P13497 986 aa6.61□□□□□ -1.35
TRIM25-208ENST00000574234 EIF2S2P20042 333 aaKnown RBP6.61□□□□□ -1.35
TRIM25-208ENST00000574234 IGFBP4P22692 258 aa6.61□□□□□ -1.35
TRIM25-208ENST00000574234 U2AF1Q01081 240 aaKnown RBP eCLIP6.61□□□□□ -1.351e-11■□□□□ 8.4
TRIM25-208ENST00000574234 RAD51AP2Q09MP3 1159 aa6.61□□□□□ -1.35
TRIM25-208ENST00000574234 NAA30Q147X3 362 aaPredicted RBP6.61□□□□□ -1.35
TRIM25-208ENST00000574234 C9orf50Q5SZB4 431 aa6.61□□□□□ -1.35
TRIM25-208ENST00000574234 PIK3R5Q8WYR1 880 aa6.61□□□□□ -1.35
TRIM25-208ENST00000574234 ZKSCAN4Q969J2 545 aaPredicted RBP6.61□□□□□ -1.35
TRIM25-208ENST00000574234 TMEM39BQ9GZU3 492 aa6.61□□□□□ -1.35
TRIM25-208ENST00000574234 KCNH6Q9H252 994 aa6.61□□□□□ -1.35
TRIM25-208ENST00000574234 EPHX3Q9H6B9 360 aa6.61□□□□□ -1.35
TRIM25-208ENST00000574234 CD209Q9NNX6 404 aa6.61□□□□□ -1.35
TRIM25-208ENST00000574234 C11orf16Q9NQ32 467 aa6.61□□□□□ -1.35
TRIM25-208ENST00000574234 ZNF70Q9UC06 446 aaPredicted RBP6.61□□□□□ -1.35
TRIM25-208ENST00000574234 PRKAG2Q9UGJ0 569 aa6.61□□□□□ -1.35
TRIM25-208ENST00000574234 PCDHB11Q9Y5F2 797 aa6.61□□□□□ -1.35
TRIM25-208ENST00000574234 CFAP54Q96N23 3096 aa6.6□□□□□ -1.35
TRIM25-208ENST00000574234 MAGEB6P1A0A0J9YX57 407 aa6.6□□□□□ -1.35
TRIM25-208ENST00000574234 CXCL11O14625 94 aa6.6□□□□□ -1.35
TRIM25-208ENST00000574234 DSC3Q14574 896 aa6.6□□□□□ -1.35
TRIM25-208ENST00000574234 DCAF15Q66K64 600 aa6.6□□□□□ -1.35
TRIM25-208ENST00000574234 GPAT2Q6NUI2 795 aa6.6□□□□□ -1.35
TRIM25-208ENST00000574234 ZNF687Q8N1G0 1237 aa6.6□□□□□ -1.35
TRIM25-208ENST00000574234 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.6□□□□□ -1.35
TRIM25-208ENST00000574234 ANKK1Q8NFD2 765 aa6.6□□□□□ -1.35
TRIM25-208ENST00000574234 GAS2L1Q99501 681 aaPredicted RBP6.6□□□□□ -1.35
TRIM25-208ENST00000574234 BABAM1Q9NWV8 329 aa6.6□□□□□ -1.35
TRIM25-208ENST00000574234 TSR3Q9UJK0 312 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms