RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, human

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPLOC4-215	ENST00000574095	ZMYM1	Q5SVZ6	1142 aa		31.17	■■■□□ 2.58
NPLOC4-215	ENST00000574095	LBX2	Q6XYB7	198 aa		31.17	■■■□□ 2.58
NPLOC4-215	ENST00000574095	GPR142	Q7Z601	462 aa		31.17	■■■□□ 2.58
NPLOC4-215	ENST00000574095	TANGO6	Q9C0B7	1094 aa		31.17	■■■□□ 2.58
NPLOC4-215	ENST00000574095	STAP2	Q9UGK3	403 aa		31.17	■■■□□ 2.58
NPLOC4-215	ENST00000574095	EEF2	P13639	858 aa	Known RBP	31.16	■■■□□ 2.58
NPLOC4-215	ENST00000574095	PDE1A	P54750	535 aa		31.16	■■■□□ 2.58
NPLOC4-215	ENST00000574095	COG2	Q14746	738 aa		31.16	■■■□□ 2.58
NPLOC4-215	ENST00000574095	PLEKHH3	Q7Z736	793 aa		31.16	■■■□□ 2.58
NPLOC4-215	ENST00000574095	IFNL3	Q8IZI9	196 aa		31.16	■■■□□ 2.58
NPLOC4-215	ENST00000574095	SPICE1	Q8N0Z3	855 aa		31.16	■■■□□ 2.58
NPLOC4-215	ENST00000574095	U2AF1L4	Q8WU68	220 aa	Known RBP	31.16	■■■□□ 2.58
NPLOC4-215	ENST00000574095	SH2D4A	Q9H788	454 aa		31.16	■■■□□ 2.58
NPLOC4-215	ENST00000574095	VCPKMT	Q9H867	229 aa		31.16	■■■□□ 2.58
NPLOC4-215	ENST00000574095	HMGCR	P04035	888 aa		31.15	■■■□□ 2.58
NPLOC4-215	ENST00000574095	CCNA1	P78396	465 aa		31.15	■■■□□ 2.58
NPLOC4-215	ENST00000574095	TRIM32	Q13049	653 aa		31.15	■■■□□ 2.58
NPLOC4-215	ENST00000574095	B4GALNT3	Q6L9W6	998 aa		31.15	■■■□□ 2.58
NPLOC4-215	ENST00000574095	SOCS4	Q8WXH5	440 aa		31.15	■■■□□ 2.58
NPLOC4-215	ENST00000574095	LNPK	Q9C0E8	428 aa		31.15	■■■□□ 2.58
NPLOC4-215	ENST00000574095	RWDD1	Q9H446	243 aa	Predicted RBP	31.15	■■■□□ 2.58
NPLOC4-215	ENST00000574095	KANSL2	Q9H9L4	492 aa		31.15	■■■□□ 2.58
NPLOC4-215	ENST00000574095	MKNK2	Q9HBH9	465 aa		31.15	■■■□□ 2.58
NPLOC4-215	ENST00000574095	CWC22	Q9HCG8	908 aa	Known RBP	31.15	■■■□□ 2.58
NPLOC4-215	ENST00000574095	SGPL1	O95470	568 aa		31.14	■■■□□ 2.58
NPLOC4-215	ENST00000574095	RASA1	P20936	1047 aa		31.14	■■■□□ 2.58
NPLOC4-215	ENST00000574095	TRIB2	Q92519	343 aa		31.14	■■■□□ 2.58
NPLOC4-215	ENST00000574095	LPAR1	Q92633	364 aa		31.14	■■■□□ 2.58
NPLOC4-215	ENST00000574095	DEFB118	Q96PH6	123 aa		31.14	■■■□□ 2.58
NPLOC4-215	ENST00000574095	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	31.14	■■■□□ 2.58
NPLOC4-215	ENST00000574095	HOXC10	Q9NYD6	342 aa		31.14	■■■□□ 2.58
NPLOC4-215	ENST00000574095	RLF	Q13129	1914 aa		31.14	■■■□□ 2.57
NPLOC4-215	ENST00000574095	MORN1	Q5T089	497 aa		31.13	■■■□□ 2.57
NPLOC4-215	ENST00000574095	WDR78	Q5VTH9	848 aa		31.13	■■■□□ 2.57
NPLOC4-215	ENST00000574095	IGHD	P01880	384 aa		31.12	■■■□□ 2.57
NPLOC4-215	ENST00000574095	SMC5	Q8IY18	1101 aa		31.12	■■■□□ 2.57
NPLOC4-215	ENST00000574095	USP6NL	Q92738	828 aa		31.12	■■■□□ 2.57
NPLOC4-215	ENST00000574095	EVI5L	Q96CN4	794 aa		31.12	■■■□□ 2.57
NPLOC4-215	ENST00000574095	PAK6	Q9NQU5	681 aa	Predicted RBP	31.12	■■■□□ 2.57
NPLOC4-215	ENST00000574095	SUPT16H	Q9Y5B9	1047 aa	Known RBP	31.12	■■■□□ 2.57
NPLOC4-215	ENST00000574095	ROBO3	Q96MS0	1386 aa		31.12	■■■□□ 2.57
NPLOC4-215	ENST00000574095	CCDC129	Q6ZRS4	1044 aa		31.11	■■■□□ 2.57
NPLOC4-215	ENST00000574095	NACAP1	Q9BZK3	213 aa		31.11	■■■□□ 2.57
NPLOC4-215	ENST00000574095	GREB1L	Q9C091	1923 aa	Predicted RBP	31.11	■■■□□ 2.57
NPLOC4-215	ENST00000574095	TFRC	P02786	760 aa	Known RBP	31.1	■■■□□ 2.57
NPLOC4-215	ENST00000574095	XRCC5	P13010	732 aa	Known RBP	31.1	■■■□□ 2.57
NPLOC4-215	ENST00000574095	RGS2	P41220	211 aa		31.1	■■■□□ 2.57
NPLOC4-215	ENST00000574095	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	31.1	■■■□□ 2.57
NPLOC4-215	ENST00000574095	WDR46	O15213	610 aa	Known RBP	31.09	■■■□□ 2.57
NPLOC4-215	ENST00000574095	PRDM1	O75626	825 aa		31.09	■■■□□ 2.57
NPLOC4-215	ENST00000574095	FLOT1	O75955	427 aa		31.09	■■■□□ 2.57
NPLOC4-215	ENST00000574095	DSG3	P32926	999 aa		31.09	■■■□□ 2.57
NPLOC4-215	ENST00000574095	SAMD1	Q6SPF0	538 aa	Predicted RBP	31.09	■■■□□ 2.57
NPLOC4-215	ENST00000574095	NAPB	Q9H115	298 aa		31.09	■■■□□ 2.57
NPLOC4-215	ENST00000574095	RPTOR	Q8N122	1335 aa		31.08	■■■□□ 2.57
NPLOC4-215	ENST00000574095	RAD21	O60216	631 aa		31.08	■■■□□ 2.57
NPLOC4-215	ENST00000574095	CCL14	Q16627	93 aa		31.08	■■■□□ 2.57
NPLOC4-215	ENST00000574095	ZNF444	Q8N0Y2	327 aa	Predicted RBP	31.08	■■■□□ 2.57
NPLOC4-215	ENST00000574095	HMX1	Q9NP08	348 aa	Predicted RBP	31.08	■■■□□ 2.57
NPLOC4-215	ENST00000574095	PTPRE	P23469	700 aa		31.07	■■■□□ 2.56
NPLOC4-215	ENST00000574095	MAP2K5	Q13163	448 aa		31.07	■■■□□ 2.56
NPLOC4-215	ENST00000574095	UBE2Q1	Q7Z7E8	422 aa		31.07	■■■□□ 2.56
NPLOC4-215	ENST00000574095	ATG4C	Q96DT6	458 aa		31.07	■■■□□ 2.56
NPLOC4-215	ENST00000574095	MOV10L1	Q9BXT6	1211 aa	Known RBP	31.07	■■■□□ 2.56
NPLOC4-215	ENST00000574095	GOPC	Q9HD26	462 aa		31.07	■■■□□ 2.56
NPLOC4-215	ENST00000574095	PARP14	Q460N5	1801 aa		31.07	■■■□□ 2.56
NPLOC4-215	ENST00000574095	FARP2	O94887	1054 aa	Predicted RBP	31.06	■■■□□ 2.56
NPLOC4-215	ENST00000574095	ZKSCAN1	P17029	563 aa	Predicted RBP	31.06	■■■□□ 2.56
NPLOC4-215	ENST00000574095	SPATC1L	Q9H0A9	340 aa		31.06	■■■□□ 2.56
NPLOC4-215	ENST00000574095	ZNF287	Q9HBT7	754 aa		31.06	■■■□□ 2.56
NPLOC4-215	ENST00000574095	IVNS1ABP	Q9Y6Y0	642 aa		31.06	■■■□□ 2.56
NPLOC4-215	ENST00000574095		A0A0G2JMZ2	1700 aa		31.06	■■■□□ 2.56
NPLOC4-215	ENST00000574095	SLC15A5	A6NIM6	579 aa		31.05	■■■□□ 2.56
NPLOC4-215	ENST00000574095	PRKAR2A	P13861	404 aa	Known RBP	31.05	■■■□□ 2.56
NPLOC4-215	ENST00000574095	CHD1L	Q86WJ1	897 aa		31.05	■■■□□ 2.56
NPLOC4-215	ENST00000574095	TRMT44	Q8IYL2	757 aa	Known RBP	31.05	■■■□□ 2.56
NPLOC4-215	ENST00000574095	APBA2	Q99767	749 aa		31.05	■■■□□ 2.56
NPLOC4-215	ENST00000574095	CRISPLD2	Q9H0B8	497 aa		31.05	■■■□□ 2.56
NPLOC4-215	ENST00000574095	FOXP2	O15409	715 aa		31.04	■■■□□ 2.56
NPLOC4-215	ENST00000574095	PPARA	Q07869	468 aa		31.04	■■■□□ 2.56
NPLOC4-215	ENST00000574095	PLS1	Q14651	629 aa		31.04	■■■□□ 2.56
NPLOC4-215	ENST00000574095	MAP3K21	Q5TCX8	1036 aa		31.04	■■■□□ 2.56
NPLOC4-215	ENST00000574095	MB21D1	Q8N884	522 aa		31.04	■■■□□ 2.56
NPLOC4-215	ENST00000574095	FBXO28	Q9NVF7	368 aa		31.04	■■■□□ 2.56
NPLOC4-215	ENST00000574095	NYAP2	Q9P242	653 aa		31.04	■■■□□ 2.56
NPLOC4-215	ENST00000574095	MYH4	Q9Y623	1939 aa		31.03	■■■□□ 2.56
NPLOC4-215	ENST00000574095	IGKV6D-41	A0A0C4DH26	115 aa		31.03	■■■□□ 2.56
NPLOC4-215	ENST00000574095	NUCB1	Q02818	461 aa		31.03	■■■□□ 2.56
NPLOC4-215	ENST00000574095	CACNB2	Q08289	660 aa	Predicted RBP	31.03	■■■□□ 2.56
NPLOC4-215	ENST00000574095	FAM83B	Q5T0W9	1011 aa		31.03	■■■□□ 2.56
NPLOC4-215	ENST00000574095	VPS53	Q5VIR6	699 aa		31.03	■■■□□ 2.56
NPLOC4-215	ENST00000574095	HELLS	Q9NRZ9	838 aa		31.03	■■■□□ 2.56
NPLOC4-215	ENST00000574095	CLIP2	Q9UDT6	1046 aa		31.03	■■■□□ 2.56
NPLOC4-215	ENST00000574095	COL11A1	P12107	1806 aa	Predicted RBP	31.03	■■■□□ 2.56
NPLOC4-215	ENST00000574095	TRIM6-TRIM34	B2RNG4	842 aa		31.02	■■■□□ 2.56
NPLOC4-215	ENST00000574095	PDE4B	Q07343	736 aa		31.02	■■■□□ 2.56
NPLOC4-215	ENST00000574095	GRB14	Q14449	540 aa		31.02	■■■□□ 2.56
NPLOC4-215	ENST00000574095	DPF3	Q92784	378 aa		31.02	■■■□□ 2.56
NPLOC4-215	ENST00000574095	FAM227B	Q96M60	508 aa		31.02	■■■□□ 2.56
NPLOC4-215	ENST00000574095	SLC3A2	P08195	630 aa	Known RBP	31.01	■■■□□ 2.55

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