RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 ZNF236Q9UL36 1845 aa14.7□□□□□ -0.06
CCDC40-210ENST00000573903 BAZ2AQ9UIF9 1905 aaKnown RBP14.69□□□□□ -0.06
CCDC40-210ENST00000573903 TCRBV5S4A2TA0A5A2 114 aa14.69□□□□□ -0.06
CCDC40-210ENST00000573903 MBD4O95243 580 aa14.69□□□□□ -0.06
CCDC40-210ENST00000573903 ADD2P35612 726 aa14.69□□□□□ -0.06
CCDC40-210ENST00000573903 LHX8Q68G74 356 aa14.69□□□□□ -0.06
CCDC40-210ENST00000573903 DPP9Q86TI2 863 aa14.69□□□□□ -0.06
CCDC40-210ENST00000573903 MB21D1Q8N884 522 aa14.69□□□□□ -0.06
CCDC40-210ENST00000573903 LPAR1Q92633 364 aa14.69□□□□□ -0.06
CCDC40-210ENST00000573903 BOLA2Q9H3K6 86 aa14.69□□□□□ -0.06
CCDC40-210ENST00000573903 ZBTB40Q9NUA8 1239 aa14.69□□□□□ -0.06
CCDC40-210ENST00000573903 SLC5A4Q9NY91 659 aa14.69□□□□□ -0.06
CCDC40-210ENST00000573903 A0A0G2JMZ2 1700 aa14.69□□□□□ -0.06
CCDC40-210ENST00000573903 STRNO43815 780 aa14.68□□□□□ -0.06
CCDC40-210ENST00000573903 HOXC6P09630 235 aa14.68□□□□□ -0.06
CCDC40-210ENST00000573903 COL6A1P12109 1028 aa14.68□□□□□ -0.06
CCDC40-210ENST00000573903 ATP5JP18859 108 aa14.68□□□□□ -0.06
CCDC40-210ENST00000573903 MAGEA10P43363 369 aaPredicted RBP14.68□□□□□ -0.06
CCDC40-210ENST00000573903 ICA1Q05084 483 aa14.68□□□□□ -0.06
CCDC40-210ENST00000573903 PLS1Q14651 629 aa14.68□□□□□ -0.06
CCDC40-210ENST00000573903 ZSCAN25Q6NSZ9 544 aa14.68□□□□□ -0.06
CCDC40-210ENST00000573903 LRCH3Q96II8 777 aa14.68□□□□□ -0.06
CCDC40-210ENST00000573903 CCDC17Q96LX7 622 aa14.68□□□□□ -0.06
CCDC40-210ENST00000573903 UBE2OQ9C0C9 1292 aaKnown RBP14.68□□□□□ -0.06
CCDC40-210ENST00000573903 FLRT1Q9NZU1 646 aa14.68□□□□□ -0.06
CCDC40-210ENST00000573903 DDX20Q9UHI6 824 aaKnown RBP14.68□□□□□ -0.06
CCDC40-210ENST00000573903 A0A1W2PRG0 241 aa14.67□□□□□ -0.06
CCDC40-210ENST00000573903 SOX1O00570 391 aaPredicted RBP14.67□□□□□ -0.06
CCDC40-210ENST00000573903 FLOT1O75955 427 aa14.67□□□□□ -0.06
CCDC40-210ENST00000573903 CYP2D6P10635 497 aa14.67□□□□□ -0.06
CCDC40-210ENST00000573903 EVX2Q03828 476 aa14.67□□□□□ -0.06
CCDC40-210ENST00000573903 TDHQ8IZJ6 230 aa14.67□□□□□ -0.06
CCDC40-210ENST00000573903 SLC44A5Q8NCS7 719 aa14.67□□□□□ -0.06
CCDC40-210ENST00000573903 SHCBP1Q8NEM2 672 aa14.67□□□□□ -0.06
CCDC40-210ENST00000573903 DYNLL2Q96FJ2 89 aa14.67□□□□□ -0.06
CCDC40-210ENST00000573903 HAUS7Q99871 368 aa14.67□□□□□ -0.06
CCDC40-210ENST00000573903 MOV10L1Q9BXT6 1211 aaKnown RBP14.67□□□□□ -0.06
CCDC40-210ENST00000573903 SPATC1LQ9H0A9 340 aa14.67□□□□□ -0.06
CCDC40-210ENST00000573903 ERCC3P19447 782 aa14.66□□□□□ -0.06
CCDC40-210ENST00000573903 ADORA2AP29274 412 aa14.66□□□□□ -0.06
CCDC40-210ENST00000573903 CYP2C19P33261 490 aa14.66□□□□□ -0.06
CCDC40-210ENST00000573903 LRRC26Q2I0M4 334 aa14.66□□□□□ -0.06
CCDC40-210ENST00000573903 OLFML2BQ68BL8 750 aa14.66□□□□□ -0.06
CCDC40-210ENST00000573903 SAMD1Q6SPF0 538 aaPredicted RBP14.66□□□□□ -0.06
CCDC40-210ENST00000573903 NCAPG2Q86XI2 1143 aa14.66□□□□□ -0.06
CCDC40-210ENST00000573903 SIRT2Q8IXJ6 389 aa14.66□□□□□ -0.06
CCDC40-210ENST00000573903 NPLOC4Q8TAT6 608 aa14.66□□□□□ -0.06
CCDC40-210ENST00000573903 LRRCC1Q9C099 1032 aa14.66□□□□□ -0.06
CCDC40-210ENST00000573903 SENP6Q9GZR1 1112 aaPredicted RBP14.66□□□□□ -0.06
CCDC40-210ENST00000573903 MROH8Q9H579 483 aa14.66□□□□□ -0.06
CCDC40-210ENST00000573903 VCPKMTQ9H867 229 aa14.66□□□□□ -0.06
CCDC40-210ENST00000573903 TMX2Q9Y320 296 aa14.66□□□□□ -0.06
CCDC40-210ENST00000573903 DNM1LO00429 736 aa14.65□□□□□ -0.06
CCDC40-210ENST00000573903 WDR46O15213 610 aaKnown RBP14.65□□□□□ -0.06
CCDC40-210ENST00000573903 PRKAB2O43741 272 aa14.65□□□□□ -0.06
CCDC40-210ENST00000573903 AKR1B1P15121 316 aa14.65□□□□□ -0.06
CCDC40-210ENST00000573903 DSG3P32926 999 aa14.65□□□□□ -0.06
CCDC40-210ENST00000573903 UBE3CQ15386 1083 aa14.65□□□□□ -0.06
CCDC40-210ENST00000573903 GPR153Q6NV75 609 aa14.65□□□□□ -0.06
CCDC40-210ENST00000573903 SPICE1Q8N0Z3 855 aa14.65□□□□□ -0.06
CCDC40-210ENST00000573903 LBHD1Q9BQE6 289 aaPredicted RBP14.65□□□□□ -0.06
CCDC40-210ENST00000573903 PRKAG2Q9UGJ0 569 aa14.65□□□□□ -0.06
CCDC40-210ENST00000573903 SLC4A4Q9Y6R1 1079 aa14.65□□□□□ -0.06
CCDC40-210ENST00000573903 RANBP2P49792 3224 aaKnown RBP14.65□□□□□ -0.06
CCDC40-210ENST00000573903 RLFQ13129 1914 aa14.64□□□□□ -0.07
CCDC40-210ENST00000573903 PARP14Q460N5 1801 aa14.64□□□□□ -0.07
CCDC40-210ENST00000573903 USP17L12C9JPN9 530 aa14.64□□□□□ -0.07
CCDC40-210ENST00000573903 KBTBD13C9JR72 458 aa14.64□□□□□ -0.07
CCDC40-210ENST00000573903 USP17L21D6R901 530 aa14.64□□□□□ -0.07
CCDC40-210ENST00000573903 CYBAP13498 195 aa14.64□□□□□ -0.07
CCDC40-210ENST00000573903 CDK8P49336 464 aa14.64□□□□□ -0.07
CCDC40-210ENST00000573903 LRIT3Q3SXY7 679 aa14.64□□□□□ -0.07
CCDC40-210ENST00000573903 C12orf60Q5U649 245 aa14.64□□□□□ -0.07
CCDC40-210ENST00000573903 C16orf86Q6ZW13 317 aa14.64□□□□□ -0.07
CCDC40-210ENST00000573903 CLEC10AQ8IUN9 316 aa14.64□□□□□ -0.07
CCDC40-210ENST00000573903 ABRAQ8N0Z2 381 aa14.64□□□□□ -0.07
CCDC40-210ENST00000573903 ARRDC4Q8NCT1 418 aa14.64□□□□□ -0.07
CCDC40-210ENST00000573903 ATG4CQ96DT6 458 aa14.64□□□□□ -0.07
CCDC40-210ENST00000573903 GPATCH3Q96I76 525 aa14.64□□□□□ -0.07
CCDC40-210ENST00000573903 GOPCQ9HD26 462 aa14.64□□□□□ -0.07
CCDC40-210ENST00000573903 ARPP21Q9UBL0 812 aaPredicted RBP14.64□□□□□ -0.07
CCDC40-210ENST00000573903 RAD21O60216 631 aa14.63□□□□□ -0.07
CCDC40-210ENST00000573903 SLC25A27O95847 323 aa14.63□□□□□ -0.07
CCDC40-210ENST00000573903 FCER1AP12319 257 aa14.63□□□□□ -0.07
CCDC40-210ENST00000573903 MDM2Q00987 491 aaPredicted RBP14.63□□□□□ -0.07
CCDC40-210ENST00000573903 SLFNL1Q499Z3 407 aa14.63□□□□□ -0.07
CCDC40-210ENST00000573903 KANSL2Q9H9L4 492 aa14.63□□□□□ -0.07
CCDC40-210ENST00000573903 SZT2Q5T011 3432 aa14.63□□□□□ -0.07
CCDC40-210ENST00000573903 COL11A1P12107 1806 aaPredicted RBP14.62□□□□□ -0.07
CCDC40-210ENST00000573903 CYP2D7A0A087X1C5 515 aa14.62□□□□□ -0.07
CCDC40-210ENST00000573903 SEPT4O43236 478 aa14.62□□□□□ -0.07
CCDC40-210ENST00000573903 MYCNP04198 464 aaPredicted RBP14.62□□□□□ -0.07
CCDC40-210ENST00000573903 EEF2P13639 858 aaKnown RBP14.62□□□□□ -0.07
CCDC40-210ENST00000573903 ATN1P54259 1190 aaPredicted RBP14.62□□□□□ -0.07
CCDC40-210ENST00000573903 KIAA1755Q5JYT7 1200 aa14.62□□□□□ -0.07
CCDC40-210ENST00000573903 DEFB123Q8N688 67 aa14.62□□□□□ -0.07
CCDC40-210ENST00000573903 SLC17A8Q8NDX2 589 aa14.62□□□□□ -0.07
CCDC40-210ENST00000573903 COPB2P35606 906 aa14.61□□□□□ -0.07
CCDC40-210ENST00000573903 KCTD2Q14681 263 aa14.61□□□□□ -0.07
CCDC40-210ENST00000573903 GJC2Q5T442 439 aaPredicted RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms