RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 PRKCZQ05513 592 aa33.01■■■□□ 2.87
SCARF1-207ENST00000573867 PDE4BQ07343 736 aa33.01■■■□□ 2.87
SCARF1-207ENST00000573867 FAM47AQ5JRC9 791 aa33.01■■■□□ 2.87
SCARF1-207ENST00000573867 ZNF287Q9HBT7 754 aa33.01■■■□□ 2.87
SCARF1-207ENST00000573867 GABRQQ9UN88 632 aa33.01■■■□□ 2.87
SCARF1-207ENST00000573867 PLIN4Q96Q06 1357 aa33■■■□□ 2.87
SCARF1-207ENST00000573867 CNMDO75829 334 aa33■■■□□ 2.87
SCARF1-207ENST00000573867 SH2D4AQ9H788 454 aa33■■■□□ 2.87
SCARF1-207ENST00000573867 MYPNQ86TC9 1320 aa33■■■□□ 2.87
SCARF1-207ENST00000573867 SLC3A2P08195 630 aaKnown RBP32.99■■■□□ 2.87
SCARF1-207ENST00000573867 Q3C1V9 767 aa32.99■■■□□ 2.87
SCARF1-207ENST00000573867 NEDD1Q8NHV4 660 aa32.99■■■□□ 2.87
SCARF1-207ENST00000573867 LPAR1Q92633 364 aa32.99■■■□□ 2.87
SCARF1-207ENST00000573867 CEP95Q96GE4 821 aa32.99■■■□□ 2.87
SCARF1-207ENST00000573867 NBPF3Q9H094 633 aa32.99■■■□□ 2.87
SCARF1-207ENST00000573867 NYAP2Q9P242 653 aa32.99■■■□□ 2.87
SCARF1-207ENST00000573867 SPDYE16A6NNV3 312 aaPredicted RBP32.98■■■□□ 2.87
SCARF1-207ENST00000573867 PRMT2P55345 433 aa32.98■■■□□ 2.87
SCARF1-207ENST00000573867 TFAP4Q01664 338 aa32.98■■■□□ 2.87
SCARF1-207ENST00000573867 ARMC5Q96C12 935 aa32.98■■■□□ 2.87
SCARF1-207ENST00000573867 PAGR1Q9BTK6 254 aa32.98■■■□□ 2.87
SCARF1-207ENST00000573867 RLFQ13129 1914 aa32.98■■■□□ 2.87
SCARF1-207ENST00000573867 TNPO2O14787 897 aaKnown RBP32.97■■■□□ 2.87
SCARF1-207ENST00000573867 FGRP09769 529 aa32.97■■■□□ 2.87
SCARF1-207ENST00000573867 MFAP1P55081 439 aaKnown RBP32.97■■■□□ 2.87
SCARF1-207ENST00000573867 SOX10P56693 466 aa32.97■■■□□ 2.87
SCARF1-207ENST00000573867 HAND2P61296 217 aa32.97■■■□□ 2.87
SCARF1-207ENST00000573867 MTMR4Q9NYA4 1195 aa32.97■■■□□ 2.87
SCARF1-207ENST00000573867 HOXD10P28358 340 aa32.96■■■□□ 2.87
SCARF1-207ENST00000573867 ERVK-9P63128 1117 aa32.96■■■□□ 2.87
SCARF1-207ENST00000573867 ERVK-24P63145 666 aa32.96■■■□□ 2.87
SCARF1-207ENST00000573867 LBX2Q6XYB7 198 aa32.96■■■□□ 2.87
SCARF1-207ENST00000573867 GPRC5AQ8NFJ5 357 aa32.96■■■□□ 2.87
SCARF1-207ENST00000573867 SH3TC2Q8TF17 1288 aa32.96■■■□□ 2.87
SCARF1-207ENST00000573867 TANGO6Q9C0B7 1094 aa32.96■■■□□ 2.87
SCARF1-207ENST00000573867 TSPY3P0CV98 308 aa32.95■■■□□ 2.87
SCARF1-207ENST00000573867 TSPY8P0CW00 308 aa32.95■■■□□ 2.87
SCARF1-207ENST00000573867 CHMLP26374 656 aa32.95■■■□□ 2.87
SCARF1-207ENST00000573867 NKX2-3Q8TAU0 364 aa32.95■■■□□ 2.87
SCARF1-207ENST00000573867 GTF3C2Q8WUA4 911 aaPredicted RBP32.95■■■□□ 2.87
SCARF1-207ENST00000573867 BTBD7Q9P203 1132 aa32.95■■■□□ 2.87
SCARF1-207ENST00000573867 CLIP2Q9UDT6 1046 aa32.95■■■□□ 2.87
SCARF1-207ENST00000573867 WDR46O15213 610 aaKnown RBP32.94■■■□□ 2.86
SCARF1-207ENST00000573867 ORC4O43929 436 aa32.94■■■□□ 2.86
SCARF1-207ENST00000573867 SLC9C1Q4G0N8 1177 aa32.94■■■□□ 2.86
SCARF1-207ENST00000573867 TBC1D10CQ8IV04 446 aa32.94■■■□□ 2.86
SCARF1-207ENST00000573867 PORCNQ9H237 461 aa32.94■■■□□ 2.86
SCARF1-207ENST00000573867 RABGAP1Q9Y3P9 1069 aa32.94■■■□□ 2.86
SCARF1-207ENST00000573867 FLT3LGP49771 235 aa32.93■■■□□ 2.86
SCARF1-207ENST00000573867 COG2Q14746 738 aa32.93■■■□□ 2.86
SCARF1-207ENST00000573867 ZNF333Q96JL9 665 aa32.93■■■□□ 2.86
SCARF1-207ENST00000573867 GOPCQ9HD26 462 aa32.93■■■□□ 2.86
SCARF1-207ENST00000573867 A0A0G2JMZ2 1700 aa32.93■■■□□ 2.86
SCARF1-207ENST00000573867 BRCA2P51587 3418 aa32.92■■■□□ 2.86
SCARF1-207ENST00000573867 RAET1EQ8TD07 263 aa32.92■■■□□ 2.86
SCARF1-207ENST00000573867 MKL1Q969V6 931 aa32.92■■■□□ 2.86
SCARF1-207ENST00000573867 NUP88Q99567 741 aaPredicted RBP32.92■■■□□ 2.86
SCARF1-207ENST00000573867 DSCC1Q9BVC3 393 aa32.92■■■□□ 2.86
SCARF1-207ENST00000573867 IL17RBQ9NRM6 502 aa32.92■■■□□ 2.86
SCARF1-207ENST00000573867 FBXO28Q9NVF7 368 aa32.92■■■□□ 2.86
SCARF1-207ENST00000573867 PARP14Q460N5 1801 aa32.91■■■□□ 2.86
SCARF1-207ENST00000573867 F5H6K3 240 aa32.91■■■□□ 2.86
SCARF1-207ENST00000573867 NMT2O60551 498 aa32.91■■■□□ 2.86
SCARF1-207ENST00000573867 NDUFB10O96000 172 aa32.91■■■□□ 2.86
SCARF1-207ENST00000573867 KLRC3Q07444 240 aa32.91■■■□□ 2.86
SCARF1-207ENST00000573867 FAM83BQ5T0W9 1011 aa32.91■■■□□ 2.86
SCARF1-207ENST00000573867 LRRC47Q8N1G4 583 aaKnown RBP32.91■■■□□ 2.86
SCARF1-207ENST00000573867 GJD2Q9UKL4 321 aa32.91■■■□□ 2.86
SCARF1-207ENST00000573867 DOCK3Q8IZD9 2030 aa32.9■■■□□ 2.86
SCARF1-207ENST00000573867 TSPY2A6NKD2 308 aa32.9■■■□□ 2.86
SCARF1-207ENST00000573867 RAD21O60216 631 aa32.9■■■□□ 2.86
SCARF1-207ENST00000573867 TTLL1O95922 423 aa32.9■■■□□ 2.86
SCARF1-207ENST00000573867 DSG3P32926 999 aa32.9■■■□□ 2.86
SCARF1-207ENST00000573867 COA7Q96BR5 231 aa32.9■■■□□ 2.86
SCARF1-207ENST00000573867 ATG4CQ96DT6 458 aa32.9■■■□□ 2.86
SCARF1-207ENST00000573867 PLXNB2O15031 1838 aa32.9■■■□□ 2.86
SCARF1-207ENST00000573867 LAMA4Q16363 1823 aa32.9■■■□□ 2.86
SCARF1-207ENST00000573867 MYH4Q9Y623 1939 aa32.9■■■□□ 2.86
SCARF1-207ENST00000573867 RANBP6O60518 1105 aaKnown RBP32.89■■■□□ 2.86
SCARF1-207ENST00000573867 FLOT1O75955 427 aa32.89■■■□□ 2.86
SCARF1-207ENST00000573867 CCDC136Q96JN2 1154 aa32.89■■■□□ 2.86
SCARF1-207ENST00000573867 HOXC10Q9NYD6 342 aa32.89■■■□□ 2.86
SCARF1-207ENST00000573867 RAD50Q92878 1312 aa32.88■■■□□ 2.85
SCARF1-207ENST00000573867 RRP12Q5JTH9 1297 aaKnown RBP32.88■■■□□ 2.85
SCARF1-207ENST00000573867 STAG1Q8WVM7 1258 aa32.88■■■□□ 2.85
SCARF1-207ENST00000573867 NEDD4P46934 1319 aa32.87■■■□□ 2.85
SCARF1-207ENST00000573867 GRK4P32298 578 aa32.87■■■□□ 2.85
SCARF1-207ENST00000573867 RGS19P49795 217 aa32.87■■■□□ 2.85
SCARF1-207ENST00000573867 IRF5Q13568 498 aa32.87■■■□□ 2.85
SCARF1-207ENST00000573867 AKNAD1Q5T1N1 836 aa32.87■■■□□ 2.85
SCARF1-207ENST00000573867 TOMM22Q9NS69 142 aa32.87■■■□□ 2.85
SCARF1-207ENST00000573867 MYCP01106 439 aaPredicted RBP32.86■■■□□ 2.85
SCARF1-207ENST00000573867 ELNP15502 786 aa32.86■■■□□ 2.85
SCARF1-207ENST00000573867 NOVP48745 357 aa32.86■■■□□ 2.85
SCARF1-207ENST00000573867 SAMD1Q6SPF0 538 aaPredicted RBP32.86■■■□□ 2.85
SCARF1-207ENST00000573867 POTEFA5A3E0 1075 aa32.85■■■□□ 2.85
SCARF1-207ENST00000573867 MAPK4P31152 587 aa32.85■■■□□ 2.85
SCARF1-207ENST00000573867 GPR142Q7Z601 462 aa32.85■■■□□ 2.85
SCARF1-207ENST00000573867 NBPF11Q86T75 865 aa32.85■■■□□ 2.85
SCARF1-207ENST00000573867 SYNPO2Q9UMS6 1093 aa32.85■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms