RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 AAMPQ13685 434 aa20.9■□□□□ 0.94
SMG6-214ENST00000573827 MAP3K21Q5TCX8 1036 aa20.9■□□□□ 0.94
SMG6-214ENST00000573827 GPR142Q7Z601 462 aa20.9■□□□□ 0.94
SMG6-214ENST00000573827 SMC5Q8IY18 1101 aa20.9■□□□□ 0.94
SMG6-214ENST00000573827 NKX2-3Q8TAU0 364 aa20.9■□□□□ 0.94
SMG6-214ENST00000573827 CRISPLD2Q9H0B8 497 aa20.9■□□□□ 0.94
SMG6-214ENST00000573827 TRIOBPQ9H2D6 2365 aa20.89■□□□□ 0.94
SMG6-214ENST00000573827 SGPL1O95470 568 aa20.89■□□□□ 0.93
SMG6-214ENST00000573827 HMGCRP04035 888 aa20.89■□□□□ 0.93
SMG6-214ENST00000573827 XRCC5P13010 732 aaKnown RBP20.89■□□□□ 0.93
SMG6-214ENST00000573827 SOCS4Q8WXH5 440 aa20.89■□□□□ 0.93
SMG6-214ENST00000573827 DDRGK1Q96HY6 314 aa20.89■□□□□ 0.93
SMG6-214ENST00000573827 VCPKMTQ9H867 229 aa20.89■□□□□ 0.93
SMG6-214ENST00000573827 PARP14Q460N5 1801 aa20.88■□□□□ 0.93
SMG6-214ENST00000573827 EEF2P13639 858 aaKnown RBP20.88■□□□□ 0.93
SMG6-214ENST00000573827 GNAT2P19087 354 aa20.88■□□□□ 0.93
SMG6-214ENST00000573827 PDE1AP54750 535 aa20.88■□□□□ 0.93
SMG6-214ENST00000573827 PLEKHH3Q7Z736 793 aa20.88■□□□□ 0.93
SMG6-214ENST00000573827 AMOTL1Q8IY63 956 aa20.88■□□□□ 0.93
SMG6-214ENST00000573827 LPAR1Q92633 364 aa20.88■□□□□ 0.93
SMG6-214ENST00000573827 KANSL2Q9H9L4 492 aa20.88■□□□□ 0.93
SMG6-214ENST00000573827 IGKV6D-41A0A0C4DH26 115 aa20.87■□□□□ 0.93
SMG6-214ENST00000573827 PATL2C9JE40 543 aaKnown RBP20.87■□□□□ 0.93
SMG6-214ENST00000573827 IGHA2P01877 340 aa20.87■□□□□ 0.93
SMG6-214ENST00000573827 CYP2B6P20813 491 aa20.87■□□□□ 0.93
SMG6-214ENST00000573827 COG2Q14746 738 aa20.87■□□□□ 0.93
SMG6-214ENST00000573827 IFNL3Q8IZI9 196 aa20.87■□□□□ 0.93
SMG6-214ENST00000573827 EXOC6Q8TAG9 804 aa20.87■□□□□ 0.93
SMG6-214ENST00000573827 DEFB118Q96PH6 123 aa20.87■□□□□ 0.93
SMG6-214ENST00000573827 NUDT12Q9BQG2 462 aa20.87■□□□□ 0.93
SMG6-214ENST00000573827 FSD1Q9BTV5 496 aa20.87■□□□□ 0.93
SMG6-214ENST00000573827 DNAH12Q6ZR08 3092 aa20.86■□□□□ 0.93
SMG6-214ENST00000573827 IGHDP01880 384 aa20.86■□□□□ 0.93
SMG6-214ENST00000573827 DSG3P32926 999 aa20.86■□□□□ 0.93
SMG6-214ENST00000573827 SPICE1Q8N0Z3 855 aa20.86■□□□□ 0.93
SMG6-214ENST00000573827 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.86■□□□□ 0.93
SMG6-214ENST00000573827 ARHGEF10LQ9HCE6 1279 aa20.86■□□□□ 0.93
SMG6-214ENST00000573827 ADAMTS5Q9UNA0 930 aa20.86■□□□□ 0.93
SMG6-214ENST00000573827 MINDY4BA8MYZ0 360 aa20.85■□□□□ 0.93
SMG6-214ENST00000573827 MNX1P50219 401 aaPredicted RBP20.85■□□□□ 0.93
SMG6-214ENST00000573827 CCL14Q16627 93 aa20.85■□□□□ 0.93
SMG6-214ENST00000573827 LRRFIP1Q32MZ4 808 aaKnown RBP20.85■□□□□ 0.93
SMG6-214ENST00000573827 MOV10L1Q9BXT6 1211 aaKnown RBP20.85■□□□□ 0.93
SMG6-214ENST00000573827 HOXC10Q9NYD6 342 aa20.85■□□□□ 0.93
SMG6-214ENST00000573827 WDR46O15213 610 aaKnown RBP20.84■□□□□ 0.93
SMG6-214ENST00000573827 HOXC6P09630 235 aa20.84■□□□□ 0.93
SMG6-214ENST00000573827 PTPREP23469 700 aa20.84■□□□□ 0.93
SMG6-214ENST00000573827 CCNA1P78396 465 aa20.84■□□□□ 0.93
SMG6-214ENST00000573827 GRB14Q14449 540 aa20.84■□□□□ 0.93
SMG6-214ENST00000573827 TANGO6Q9C0B7 1094 aa20.84■□□□□ 0.93
SMG6-214ENST00000573827 SH2D4AQ9H788 454 aa20.84■□□□□ 0.93
SMG6-214ENST00000573827 LAMA3Q16787 3333 aa20.84■□□□□ 0.93
SMG6-214ENST00000573827 RPTORQ8N122 1335 aa20.83■□□□□ 0.93
SMG6-214ENST00000573827 RGS2P41220 211 aa20.83■□□□□ 0.93
SMG6-214ENST00000573827 TDO2P48775 406 aa20.83■□□□□ 0.93
SMG6-214ENST00000573827 MAP2K5Q13163 448 aa20.83■□□□□ 0.93
SMG6-214ENST00000573827 CCDC129Q6ZRS4 1044 aa20.83■□□□□ 0.93
SMG6-214ENST00000573827 EVI5LQ96CN4 794 aa20.83■□□□□ 0.93
SMG6-214ENST00000573827 ATG4CQ96DT6 458 aa20.83■□□□□ 0.93
SMG6-214ENST00000573827 APBA2Q99767 749 aa20.83■□□□□ 0.93
SMG6-214ENST00000573827 LNPKQ9C0E8 428 aa20.83■□□□□ 0.93
SMG6-214ENST00000573827 FLRT1Q9NZU1 646 aa20.83■□□□□ 0.93
SMG6-214ENST00000573827 SZT2Q5T011 3432 aa20.82■□□□□ 0.92
SMG6-214ENST00000573827 SLC15A5A6NIM6 579 aa20.82■□□□□ 0.92
SMG6-214ENST00000573827 PRDM1O75626 825 aa20.82■□□□□ 0.92
SMG6-214ENST00000573827 FARP2O94887 1054 aaPredicted RBP20.82■□□□□ 0.92
SMG6-214ENST00000573827 PRKAR2AP13861 404 aaKnown RBP20.82■□□□□ 0.92
SMG6-214ENST00000573827 CAPN2P17655 700 aa20.82■□□□□ 0.92
SMG6-214ENST00000573827 CACNB2Q08289 660 aaPredicted RBP20.82■□□□□ 0.92
SMG6-214ENST00000573827 STK11IPQ8N1F8 1099 aa20.82■□□□□ 0.92
SMG6-214ENST00000573827 SPATC1LQ9H0A9 340 aa20.82■□□□□ 0.92
SMG6-214ENST00000573827 FBXO28Q9NVF7 368 aa20.82■□□□□ 0.92
SMG6-214ENST00000573827 NYAP2Q9P242 653 aa20.82■□□□□ 0.92
SMG6-214ENST00000573827 TACC3Q9Y6A5 838 aa20.82■□□□□ 0.92
SMG6-214ENST00000573827 PLIN4Q96Q06 1357 aa20.82■□□□□ 0.92
SMG6-214ENST00000573827 ZNF236Q9UL36 1845 aa20.81■□□□□ 0.92
SMG6-214ENST00000573827 FLOT1O75955 427 aa20.81■□□□□ 0.92
SMG6-214ENST00000573827 SLC34A2O95436 690 aa20.81■□□□□ 0.92
SMG6-214ENST00000573827 VPS53Q5VIR6 699 aa20.81■□□□□ 0.92
SMG6-214ENST00000573827 TRMT44Q8IYL2 757 aaKnown RBP20.81■□□□□ 0.92
SMG6-214ENST00000573827 MB21D1Q8N884 522 aa20.81■□□□□ 0.92
SMG6-214ENST00000573827 SHCBP1Q8NEM2 672 aa20.81■□□□□ 0.92
SMG6-214ENST00000573827 REPS2Q8NFH8 660 aa20.81■□□□□ 0.92
SMG6-214ENST00000573827 HMX1Q9NP08 348 aaPredicted RBP20.81■□□□□ 0.92
SMG6-214ENST00000573827 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.81■□□□□ 0.92
SMG6-214ENST00000573827 APPP05067 770 aa20.8■□□□□ 0.92
SMG6-214ENST00000573827 ZKSCAN1P17029 563 aaPredicted RBP20.8■□□□□ 0.92
SMG6-214ENST00000573827 NUCB1Q02818 461 aa20.8■□□□□ 0.92
SMG6-214ENST00000573827 TMEM132BQ14DG7 1078 aa20.8■□□□□ 0.92
SMG6-214ENST00000573827 TICAM2Q86XR7 235 aa20.8■□□□□ 0.92
SMG6-214ENST00000573827 DIS3LQ8TF46 1054 aaKnown RBP20.8■□□□□ 0.92
SMG6-214ENST00000573827 MKL1Q969V6 931 aa20.8■□□□□ 0.92
SMG6-214ENST00000573827 RWDD1Q9H446 243 aaPredicted RBP20.8■□□□□ 0.92
SMG6-214ENST00000573827 MKNK2Q9HBH9 465 aa20.8■□□□□ 0.92
SMG6-214ENST00000573827 OGDHLQ9ULD0 1010 aa20.8■□□□□ 0.92
SMG6-214ENST00000573827 A0A0D9SFI3 127 aa20.79■□□□□ 0.92
SMG6-214ENST00000573827 TFRCP02786 760 aaKnown RBP20.79■□□□□ 0.92
SMG6-214ENST00000573827 ERCC3P19447 782 aa20.79■□□□□ 0.92
SMG6-214ENST00000573827 ATP2B2Q01814 1243 aa20.79■□□□□ 0.92
SMG6-214ENST00000573827 PPARAQ07869 468 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms