RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 BIN1O00499 593 aa11.5□□□□□ -0.57
SMG6-213ENST00000573166 BACH1O14867 736 aa11.5□□□□□ -0.57
SMG6-213ENST00000573166 SERPINC1P01008 464 aa11.5□□□□□ -0.57
SMG6-213ENST00000573166 NT5C2P49902 561 aa11.5□□□□□ -0.57
SMG6-213ENST00000573166 HDLBPQ00341 1268 aaKnown RBP11.5□□□□□ -0.57
SMG6-213ENST00000573166 SPP2Q13103 211 aa11.5□□□□□ -0.57
SMG6-213ENST00000573166 AMNQ9BXJ7 453 aa11.5□□□□□ -0.57
SMG6-213ENST00000573166 ZBTB21Q9ULJ3 1066 aa11.5□□□□□ -0.57
SMG6-213ENST00000573166 MRPL11Q9Y3B7 192 aaKnown RBP11.5□□□□□ -0.57
SMG6-213ENST00000573166 NMT2O60551 498 aa11.5□□□□□ -0.57
SMG6-213ENST00000573166 CCNT1O60563 726 aaKnown RBP11.5□□□□□ -0.57
SMG6-213ENST00000573166 ENTPD3O75355 529 aa11.5□□□□□ -0.57
SMG6-213ENST00000573166 IL1R1P14778 569 aa11.5□□□□□ -0.57
SMG6-213ENST00000573166 LIG1P18858 919 aa11.5□□□□□ -0.57
SMG6-213ENST00000573166 STAT6P42226 847 aa11.5□□□□□ -0.57
SMG6-213ENST00000573166 RBM10P98175 930 aaKnown RBP11.5□□□□□ -0.57
SMG6-213ENST00000573166 ANKRD35Q8N283 1001 aa11.5□□□□□ -0.57
SMG6-213ENST00000573166 CEP95Q96GE4 821 aa11.5□□□□□ -0.57
SMG6-213ENST00000573166 PRMT6Q96LA8 375 aaPredicted RBP11.5□□□□□ -0.57
SMG6-213ENST00000573166 NAP1L4Q99733 375 aaKnown RBP11.5□□□□□ -0.57
SMG6-213ENST00000573166 VWA3AA6NCI4 1184 aa11.49□□□□□ -0.57
SMG6-213ENST00000573166 ESPNB1AK53 854 aa11.49□□□□□ -0.57
SMG6-213ENST00000573166 CTAGE5O15320 804 aa11.49□□□□□ -0.57
SMG6-213ENST00000573166 OFD1O75665 1012 aa11.49□□□□□ -0.57
SMG6-213ENST00000573166 CDC37L1Q7L3B6 337 aa11.49□□□□□ -0.57
SMG6-213ENST00000573166 NCAPG2Q86XI2 1143 aa11.49□□□□□ -0.57
SMG6-213ENST00000573166 DDNO94850 711 aaPredicted RBP11.49□□□□□ -0.57
SMG6-213ENST00000573166 AFMP43652 599 aa11.49□□□□□ -0.57
SMG6-213ENST00000573166 STAT2P52630 851 aa11.49□□□□□ -0.57
SMG6-213ENST00000573166 UIMC1Q96RL1 719 aa11.49□□□□□ -0.57
SMG6-213ENST00000573166 PSMD1Q99460 953 aa11.49□□□□□ -0.57
SMG6-213ENST00000573166 TMEM47Q9BQJ4 181 aa11.49□□□□□ -0.57
SMG6-213ENST00000573166 DEFB129Q9H1M3 183 aa11.49□□□□□ -0.57
SMG6-213ENST00000573166 USP17L5A8MUK1 530 aa11.49□□□□□ -0.57
SMG6-213ENST00000573166 TTC38Q5R3I4 469 aa11.49□□□□□ -0.57
SMG6-213ENST00000573166 KANK3Q6NY19 840 aa11.49□□□□□ -0.57
SMG6-213ENST00000573166 VGLL2Q8N8G2 317 aa11.49□□□□□ -0.57
SMG6-213ENST00000573166 FAM151AQ8WW52 585 aa11.49□□□□□ -0.57
SMG6-213ENST00000573166 AKR1B1P15121 316 aa11.49□□□□□ -0.57
SMG6-213ENST00000573166 CYB5R4Q7L1T6 521 aa11.49□□□□□ -0.57
SMG6-213ENST00000573166 TMEM39BQ9GZU3 492 aa11.49□□□□□ -0.57
SMG6-213ENST00000573166 BLIDQ8IZY5 108 aa11.48□□□□□ -0.57
SMG6-213ENST00000573166 KRI1Q8N9T8 703 aaKnown RBP11.48□□□□□ -0.57
SMG6-213ENST00000573166 RNF26Q9BY78 433 aaPredicted RBP11.48□□□□□ -0.57
SMG6-213ENST00000573166 GPBP1L1Q9HC44 474 aaPredicted RBP11.48□□□□□ -0.57
SMG6-213ENST00000573166 CD2BP2O95400 341 aaKnown RBP11.48□□□□□ -0.57
SMG6-213ENST00000573166 EEF2P13639 858 aaKnown RBP11.48□□□□□ -0.57
SMG6-213ENST00000573166 TXKP42681 527 aa11.48□□□□□ -0.57
SMG6-213ENST00000573166 PPP4CP60510 307 aa11.48□□□□□ -0.57
SMG6-213ENST00000573166 ANO1Q5XXA6 986 aa11.48□□□□□ -0.57
SMG6-213ENST00000573166 ISM2Q6H9L7 571 aa11.48□□□□□ -0.57
SMG6-213ENST00000573166 ENAHQ8N8S7 591 aaPredicted RBP11.48□□□□□ -0.57
SMG6-213ENST00000573166 SMARCE1Q969G3 411 aa11.48□□□□□ -0.57
SMG6-213ENST00000573166 DHX58Q96C10 678 aa11.48□□□□□ -0.57
SMG6-213ENST00000573166 CEP89Q96ST8 783 aa11.48□□□□□ -0.57
SMG6-213ENST00000573166 ANO10Q9NW15 660 aa11.48□□□□□ -0.57
SMG6-213ENST00000573166 BTBD18B2RXH4 712 aa11.48□□□□□ -0.57
SMG6-213ENST00000573166 TBCAO75347 108 aaKnown RBP11.48□□□□□ -0.57
SMG6-213ENST00000573166 PLCD1P51178 756 aa11.48□□□□□ -0.57
SMG6-213ENST00000573166 RRAGBQ5VZM2 374 aa11.48□□□□□ -0.57
SMG6-213ENST00000573166 ATL3Q6DD88 541 aa11.48□□□□□ -0.57
SMG6-213ENST00000573166 NEDD1Q8NHV4 660 aa11.48□□□□□ -0.57
SMG6-213ENST00000573166 OTUD5Q96G74 571 aa11.48□□□□□ -0.57
SMG6-213ENST00000573166 PLIN2Q99541 437 aa11.48□□□□□ -0.57
SMG6-213ENST00000573166 KCNQ5Q9NR82 932 aa11.48□□□□□ -0.57
SMG6-213ENST00000573166 PNMA2Q9UL42 364 aa11.48□□□□□ -0.57
SMG6-213ENST00000573166 CHMP2AO43633 222 aa11.47□□□□□ -0.57
SMG6-213ENST00000573166 PIGSQ96S52 555 aa11.47□□□□□ -0.57
SMG6-213ENST00000573166 SYT17Q9BSW7 474 aa11.47□□□□□ -0.57
SMG6-213ENST00000573166 DACT1Q9NYF0 836 aa11.47□□□□□ -0.57
SMG6-213ENST00000573166 USP17L10C9JJH3 530 aa11.47□□□□□ -0.57
SMG6-213ENST00000573166 GCOM1H8Y6P7 765 aaPredicted RBP11.47□□□□□ -0.57
SMG6-213ENST00000573166 KIF20AO95235 890 aa11.47□□□□□ -0.57
SMG6-213ENST00000573166 POLR2MP0CAP2 368 aa11.47□□□□□ -0.57
SMG6-213ENST00000573166 IFNAR1P17181 557 aa11.47□□□□□ -0.57
SMG6-213ENST00000573166 OSBPP22059 807 aa11.47□□□□□ -0.57
SMG6-213ENST00000573166 NFIAQ12857 509 aa11.47□□□□□ -0.57
SMG6-213ENST00000573166 PNMA8AQ86V59 439 aaPredicted RBP11.47□□□□□ -0.57
SMG6-213ENST00000573166 LRRC27Q9C0I9 530 aa11.47□□□□□ -0.57
SMG6-213ENST00000573166 RGS17Q9UGC6 210 aaPredicted RBP11.47□□□□□ -0.57
SMG6-213ENST00000573166 FAM205AQ6ZU69 1335 aa11.47□□□□□ -0.57
SMG6-213ENST00000573166 ORC4O43929 436 aa11.47□□□□□ -0.57
SMG6-213ENST00000573166 SBK1Q52WX2 424 aa11.47□□□□□ -0.57
SMG6-213ENST00000573166 MB21D2Q8IYB1 491 aaPredicted RBP11.47□□□□□ -0.57
SMG6-213ENST00000573166 ZDHHC15Q96MV8 337 aa11.47□□□□□ -0.57
SMG6-213ENST00000573166 EPB41L4AQ9HCS5 686 aaPredicted RBP11.47□□□□□ -0.57
SMG6-213ENST00000573166 CCNA1P78396 465 aa11.46□□□□□ -0.57
SMG6-213ENST00000573166 SYDE2Q5VT97 1194 aa11.46□□□□□ -0.57
SMG6-213ENST00000573166 FBXO18Q8NFZ0 1043 aa11.46□□□□□ -0.57
SMG6-213ENST00000573166 CHAMP1Q96JM3 812 aa11.46□□□□□ -0.57
SMG6-213ENST00000573166 MCF2L2Q86YR7 1114 aa11.46□□□□□ -0.57
SMG6-213ENST00000573166 NSUN7Q8NE18 718 aaKnown RBP11.46□□□□□ -0.57
SMG6-213ENST00000573166 VPS33BQ9H267 617 aa11.46□□□□□ -0.57
SMG6-213ENST00000573166 SPDYE2BA6NHP3 402 aa11.46□□□□□ -0.58
SMG6-213ENST00000573166 F5H6K3 240 aa11.46□□□□□ -0.58
SMG6-213ENST00000573166 SPDYE6P0CI01 402 aa11.46□□□□□ -0.58
SMG6-213ENST00000573166 KLRC3Q07444 240 aa11.46□□□□□ -0.58
SMG6-213ENST00000573166 INF2Q27J81 1249 aa11.46□□□□□ -0.58
SMG6-213ENST00000573166 NBPF9Q3BBW0 867 aa11.46□□□□□ -0.58
SMG6-213ENST00000573166 COA7Q96BR5 231 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms