RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 PROX2Q3B8N5 592 aa5.92□□□□□ -1.46
TOPBP1-210ENST00000572787 TMEM240Q5SV17 173 aa5.92□□□□□ -1.46
TOPBP1-210ENST00000572787 SPATA1Q5VX52 437 aa5.92□□□□□ -1.46
TOPBP1-210ENST00000572787 MRM1Q6IN84 353 aaKnown RBP5.92□□□□□ -1.46
TOPBP1-210ENST00000572787 BPHLQ86WA6 291 aaPredicted RBP5.92□□□□□ -1.46
TOPBP1-210ENST00000572787 CPA6Q8N4T0 437 aa5.92□□□□□ -1.46
TOPBP1-210ENST00000572787 USP7Q93009 1102 aa5.92□□□□□ -1.46
TOPBP1-210ENST00000572787 THAP11Q96EK4 314 aa5.92□□□□□ -1.46
TOPBP1-210ENST00000572787 NAA15Q9BXJ9 866 aaKnown RBP5.92□□□□□ -1.46
TOPBP1-210ENST00000572787 HELLSQ9NRZ9 838 aa5.92□□□□□ -1.46
TOPBP1-210ENST00000572787 C1orf112Q9NSG2 853 aa5.92□□□□□ -1.46
TOPBP1-210ENST00000572787 BLOC1S4Q9NUP1 217 aa5.92□□□□□ -1.46
TOPBP1-210ENST00000572787 PDP2Q9P2J9 529 aa5.92□□□□□ -1.46
TOPBP1-210ENST00000572787 DDX20Q9UHI6 824 aaKnown RBP5.92□□□□□ -1.46
TOPBP1-210ENST00000572787 SLC4A7Q9Y6M7 1214 aa5.92□□□□□ -1.46
TOPBP1-210ENST00000572787 ERBB4Q15303 1308 aa5.92□□□□□ -1.46
TOPBP1-210ENST00000572787 SMTNL1A8MU46 457 aa5.91□□□□□ -1.46
TOPBP1-210ENST00000572787 CHL1O00533 1208 aa5.91□□□□□ -1.46
TOPBP1-210ENST00000572787 NRG2O14511 850 aaPredicted RBP5.91□□□□□ -1.46
TOPBP1-210ENST00000572787 TLR3O15455 904 aaKnown RBP5.91□□□□□ -1.46
TOPBP1-210ENST00000572787 PLOD3O60568 738 aa5.91□□□□□ -1.46
TOPBP1-210ENST00000572787 ARIH2O95376 493 aa5.91□□□□□ -1.46
TOPBP1-210ENST00000572787 TPM2P07951 284 aa5.91□□□□□ -1.46
TOPBP1-210ENST00000572787 IDEP14735 1019 aa5.91□□□□□ -1.46
TOPBP1-210ENST00000572787 FOSL1P15407 271 aa5.91□□□□□ -1.46
TOPBP1-210ENST00000572787 L1CAMP32004 1257 aa5.91□□□□□ -1.46
TOPBP1-210ENST00000572787 RECQLP46063 649 aaPredicted RBP5.91□□□□□ -1.46
TOPBP1-210ENST00000572787 SCTRP47872 440 aa5.91□□□□□ -1.46
TOPBP1-210ENST00000572787 SNX16P57768 344 aa5.91□□□□□ -1.46
TOPBP1-210ENST00000572787 TRIM14Q14142 442 aa5.91□□□□□ -1.46
TOPBP1-210ENST00000572787 NCAPHQ15003 741 aa5.91□□□□□ -1.46
TOPBP1-210ENST00000572787 MTFR1Q15390 333 aa5.91□□□□□ -1.46
TOPBP1-210ENST00000572787 SLC10A6Q3KNW5 377 aa5.91□□□□□ -1.46
TOPBP1-210ENST00000572787 ATP13A4Q4VNC1 1196 aa5.91□□□□□ -1.46
TOPBP1-210ENST00000572787 ESCO1Q5FWF5 840 aa5.91□□□□□ -1.46
TOPBP1-210ENST00000572787 VPS53Q5VIR6 699 aa5.91□□□□□ -1.46
TOPBP1-210ENST00000572787 AGAP9Q5VTM2 703 aa5.91□□□□□ -1.46
TOPBP1-210ENST00000572787 KIAA1614Q5VZ46 1190 aa5.91□□□□□ -1.46
TOPBP1-210ENST00000572787 RETSATQ6NUM9 610 aa5.91□□□□□ -1.46
TOPBP1-210ENST00000572787 CCDC84Q86UT8 332 aaPredicted RBP5.91□□□□□ -1.46
TOPBP1-210ENST00000572787 FAM43AQ8N2R8 423 aa5.91□□□□□ -1.46
TOPBP1-210ENST00000572787 BAP1Q92560 729 aa5.91□□□□□ -1.46
TOPBP1-210ENST00000572787 ATP6V1E2Q96A05 226 aa5.91□□□□□ -1.46
TOPBP1-210ENST00000572787 CDC6Q99741 560 aa5.91□□□□□ -1.46
TOPBP1-210ENST00000572787 XPO4Q9C0E2 1151 aaKnown RBP5.91□□□□□ -1.46
TOPBP1-210ENST00000572787 IFT22Q9H7X7 185 aa5.91□□□□□ -1.46
TOPBP1-210ENST00000572787 PRKRIP1Q9H875 184 aaPredicted RBP5.91□□□□□ -1.46
TOPBP1-210ENST00000572787 ALG13Q9NP73 1137 aaKnown RBP5.91□□□□□ -1.46
TOPBP1-210ENST00000572787 SMC4Q9NTJ3 1288 aa5.91□□□□□ -1.46
TOPBP1-210ENST00000572787 KLK14Q9P0G3 267 aa5.91□□□□□ -1.46
TOPBP1-210ENST00000572787 GJD2Q9UKL4 321 aa5.91□□□□□ -1.46
TOPBP1-210ENST00000572787 FNDC3AQ9Y2H6 1198 aaKnown RBP5.91□□□□□ -1.46
TOPBP1-210ENST00000572787 TMX2Q9Y320 296 aa5.91□□□□□ -1.46
TOPBP1-210ENST00000572787 SERTM1A2A2V5 107 aa5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 SOWAHBA6NEL2 793 aa5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 TRIM64CA6NLI5 447 aa5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 PHF20L1A8MW92 1017 aa5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 TOR1BO14657 336 aa5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 LTFP02788 710 aa5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 PYGMP11217 842 aa5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 GLULP15104 373 aa5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 RAC2P15153 192 aa5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 NEK4P51957 841 aa5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 SMTNP53814 917 aa5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 BTKQ06187 659 aa5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 G3BP1Q13283 466 aaKnown RBP eCLIP5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 GRB10Q13322 594 aa5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 MPP2Q14168 576 aa5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 SMC1AQ14683 1233 aaKnown RBP5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 CTC1Q2NKJ3 1217 aa5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 TTC31Q49AM3 519 aaPredicted RBP5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 DIEXFQ68CQ4 756 aaKnown RBP5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 LMBRD2Q68DH5 695 aaPredicted RBP5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 HEATR6Q6AI08 1181 aaKnown RBP5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 PDE12Q6L8Q7 609 aaKnown RBP5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 PKN3Q6P5Z2 889 aa5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 CHST15Q7LFX5 561 aaPredicted RBP5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 CATIPQ7Z7H3 387 aa5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 GALNT5Q7Z7M9 940 aa5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 ANKRD18AQ8IVF6 992 aa5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 SLC41A1Q8IVJ1 513 aa5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 ALDH16A1Q8IZ83 802 aa5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 FAM26EQ8N5C1 309 aa5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 APPL2Q8NEU8 664 aa5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 COG1Q8WTW3 980 aa5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 HDAC2Q92769 488 aaKnown RBP5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 TBC1D31Q96DN5 1066 aa5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 FUBP3Q96I24 572 aaKnown RBP eCLIP5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 EXOC2Q96KP1 924 aa5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 IWS1Q96ST2 819 aa5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 NUP88Q99567 741 aaPredicted RBP5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 NUDT16L1Q9BRJ7 211 aaKnown RBP5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 ATP6V0A4Q9HBG4 840 aa5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 ETNK1Q9HBU6 452 aa5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 AGO4Q9HCK5 861 aaKnown RBP5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 ANLNQ9NQW6 1124 aa5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 NKIRAS2Q9NYR9 191 aa5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 DACH1Q9UI36 760 aa5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 RABGEF1Q9UJ41 708 aa5.9□□□□□ -1.46
TOPBP1-210ENST00000572787 MAFFQ9ULX9 164 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms