RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 ACER1Q8TDN7 264 aa16.52■□□□□ 0.24
RPAIN-211ENST00000572174 TOMM22Q9NS69 142 aa16.52■□□□□ 0.24
RPAIN-211ENST00000572174 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.52■□□□□ 0.24
RPAIN-211ENST00000572174 RLFQ13129 1914 aa16.52■□□□□ 0.23
RPAIN-211ENST00000572174 ZSWIM8A7E2V4 1837 aa16.52■□□□□ 0.23
RPAIN-211ENST00000572174 RANBP6O60518 1105 aaKnown RBP16.51■□□□□ 0.23
RPAIN-211ENST00000572174 HERVK_113P62684 666 aa16.51■□□□□ 0.23
RPAIN-211ENST00000572174 CCNA1P78396 465 aa16.51■□□□□ 0.23
RPAIN-211ENST00000572174 AKNAD1Q5T1N1 836 aa16.51■□□□□ 0.23
RPAIN-211ENST00000572174 KIAA1211Q6ZU35 1233 aa16.51■□□□□ 0.23
RPAIN-211ENST00000572174 OTOP1Q7RTM1 612 aa16.51■□□□□ 0.23
RPAIN-211ENST00000572174 STK11IPQ8N1F8 1099 aa16.51■□□□□ 0.23
RPAIN-211ENST00000572174 STAG1Q8WVM7 1258 aa16.51■□□□□ 0.23
RPAIN-211ENST00000572174 TANGO6Q9C0B7 1094 aa16.51■□□□□ 0.23
RPAIN-211ENST00000572174 HOXC10Q9NYD6 342 aa16.51■□□□□ 0.23
RPAIN-211ENST00000572174 PRDM1O75626 825 aa16.5■□□□□ 0.23
RPAIN-211ENST00000572174 FGRP09769 529 aa16.5■□□□□ 0.23
RPAIN-211ENST00000572174 TFAP4Q01664 338 aa16.5■□□□□ 0.23
RPAIN-211ENST00000572174 CTDSPL2Q05D32 466 aa16.5■□□□□ 0.23
RPAIN-211ENST00000572174 CCDC178Q5BJE1 867 aa16.5■□□□□ 0.23
RPAIN-211ENST00000572174 LBX2Q6XYB7 198 aa16.5■□□□□ 0.23
RPAIN-211ENST00000572174 CATSPERGQ6ZRH7 1159 aa16.5■□□□□ 0.23
RPAIN-211ENST00000572174 CCAR1Q8IX12 1150 aaKnown RBP16.5■□□□□ 0.23
RPAIN-211ENST00000572174 ANKRD13CQ8N6S4 541 aa16.5■□□□□ 0.23
RPAIN-211ENST00000572174 MB21D1Q8N884 522 aa16.5■□□□□ 0.23
RPAIN-211ENST00000572174 RPAP3Q9H6T3 665 aaPredicted RBP16.5■□□□□ 0.23
RPAIN-211ENST00000572174 CNNM2Q9H8M5 875 aa16.5■□□□□ 0.23
RPAIN-211ENST00000572174 MTMR4Q9NYA4 1195 aa16.5■□□□□ 0.23
RPAIN-211ENST00000572174 MORF4L1Q9UBU8 362 aa16.5■□□□□ 0.23
RPAIN-211ENST00000572174 A0A1W2PRG0 241 aa16.49■□□□□ 0.23
RPAIN-211ENST00000572174 SMIM22K7EJ46 135 aa16.49■□□□□ 0.23
RPAIN-211ENST00000572174 FMNL1O95466 1100 aaPredicted RBP16.49■□□□□ 0.23
RPAIN-211ENST00000572174 PSMC4P43686 418 aa16.49■□□□□ 0.23
RPAIN-211ENST00000572174 GPRC5AQ8NFJ5 357 aa16.49■□□□□ 0.23
RPAIN-211ENST00000572174 ESR2Q92731 530 aa16.49■□□□□ 0.23
RPAIN-211ENST00000572174 COA7Q96BR5 231 aa16.49■□□□□ 0.23
RPAIN-211ENST00000572174 ABHD8Q96I13 439 aa16.49■□□□□ 0.23
RPAIN-211ENST00000572174 RABGAP1Q9Y3P9 1069 aa16.49■□□□□ 0.23
RPAIN-211ENST00000572174 U3KPZ7 1027 aaPredicted RBP16.49■□□□□ 0.23
RPAIN-211ENST00000572174 RBBP6Q7Z6E9 1792 aaKnown RBP16.49■□□□□ 0.23
RPAIN-211ENST00000572174 PLXNB2O15031 1838 aa16.48■□□□□ 0.23
RPAIN-211ENST00000572174 IGKV6D-41A0A0C4DH26 115 aa16.48■□□□□ 0.23
RPAIN-211ENST00000572174 TNPO2O14787 897 aaKnown RBP16.48■□□□□ 0.23
RPAIN-211ENST00000572174 SGSM2O43147 1006 aa16.48■□□□□ 0.23
RPAIN-211ENST00000572174 RAD21O60216 631 aa16.48■□□□□ 0.23
RPAIN-211ENST00000572174 COG2Q14746 738 aa16.48■□□□□ 0.23
RPAIN-211ENST00000572174 IQCA1Q86XH1 822 aa16.48■□□□□ 0.23
RPAIN-211ENST00000572174 MKL1Q969V6 931 aa16.48■□□□□ 0.23
RPAIN-211ENST00000572174 CEP95Q96GE4 821 aa16.48■□□□□ 0.23
RPAIN-211ENST00000572174 KRT23Q9C075 422 aa16.48■□□□□ 0.23
RPAIN-211ENST00000572174 PTPN22Q9Y2R2 807 aa16.48■□□□□ 0.23
RPAIN-211ENST00000572174 FLOT1O75955 427 aa16.47■□□□□ 0.23
RPAIN-211ENST00000572174 MAPK4P31152 587 aa16.47■□□□□ 0.23
RPAIN-211ENST00000572174 HAND2P61296 217 aa16.47■□□□□ 0.23
RPAIN-211ENST00000572174 TRDNQ13061 729 aa16.47■□□□□ 0.23
RPAIN-211ENST00000572174 RRP12Q5JTH9 1297 aaKnown RBP16.47■□□□□ 0.23
RPAIN-211ENST00000572174 NBPF11Q86T75 865 aa16.47■□□□□ 0.23
RPAIN-211ENST00000572174 CLEC10AQ8IUN9 316 aa16.47■□□□□ 0.23
RPAIN-211ENST00000572174 GMCL1P1Q8NEA9 526 aa16.47■□□□□ 0.23
RPAIN-211ENST00000572174 P2RX7Q99572 595 aaKnown RBP16.47■□□□□ 0.23
RPAIN-211ENST00000572174 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.47■□□□□ 0.23
RPAIN-211ENST00000572174 CWC22Q9HCG8 908 aaKnown RBP16.47■□□□□ 0.23
RPAIN-211ENST00000572174 TCP11L1Q9NUJ3 509 aa16.47■□□□□ 0.23
RPAIN-211ENST00000572174 CLIP2Q9UDT6 1046 aa16.47■□□□□ 0.23
RPAIN-211ENST00000572174 CDC45O75419 566 aa16.46■□□□□ 0.23
RPAIN-211ENST00000572174 ERVK-9P63128 1117 aa16.46■□□□□ 0.23
RPAIN-211ENST00000572174 ERVK-24P63145 666 aa16.46■□□□□ 0.23
RPAIN-211ENST00000572174 FAM47AQ5JRC9 791 aa16.46■□□□□ 0.23
RPAIN-211ENST00000572174 SIAH1Q8IUQ4 282 aa16.46■□□□□ 0.23
RPAIN-211ENST00000572174 SRRDQ9UH36 339 aa16.46■□□□□ 0.23
RPAIN-211ENST00000572174 STX8Q9UNK0 236 aa16.46■□□□□ 0.23
RPAIN-211ENST00000572174 ZNF236Q9UL36 1845 aa16.46■□□□□ 0.23
RPAIN-211ENST00000572174 MYH6P13533 1939 aa16.45■□□□□ 0.22
RPAIN-211ENST00000572174 ZNFX1Q9P2E3 1918 aaKnown RBP16.45■□□□□ 0.22
RPAIN-211ENST00000572174 SPDYE16A6NNV3 312 aaPredicted RBP16.45■□□□□ 0.22
RPAIN-211ENST00000572174 COPB2P35606 906 aa16.45■□□□□ 0.22
RPAIN-211ENST00000572174 IFFO2Q5TF58 517 aa16.45■□□□□ 0.22
RPAIN-211ENST00000572174 SPICE1Q8N0Z3 855 aa16.45■□□□□ 0.22
RPAIN-211ENST00000572174 RAET1EQ8TD07 263 aa16.45■□□□□ 0.22
RPAIN-211ENST00000572174 SOCS4Q8WXH5 440 aa16.45■□□□□ 0.22
RPAIN-211ENST00000572174 TRIM47Q96LD4 638 aa16.45■□□□□ 0.22
RPAIN-211ENST00000572174 TTC14Q96N46 770 aa16.45■□□□□ 0.22
RPAIN-211ENST00000572174 PAGR1Q9BTK6 254 aa16.45■□□□□ 0.22
RPAIN-211ENST00000572174 F5H6K3 240 aa16.44■□□□□ 0.22
RPAIN-211ENST00000572174 FDX1P10109 184 aa16.44■□□□□ 0.22
RPAIN-211ENST00000572174 KLRC3Q07444 240 aa16.44■□□□□ 0.22
RPAIN-211ENST00000572174 SLC9C1Q4G0N8 1177 aa16.44■□□□□ 0.22
RPAIN-211ENST00000572174 TBC1D10CQ8IV04 446 aa16.44■□□□□ 0.22
RPAIN-211ENST00000572174 ESYT1Q9BSJ8 1104 aa16.44■□□□□ 0.22
RPAIN-211ENST00000572174 ARHGAP39Q9C0H5 1083 aa16.44■□□□□ 0.22
RPAIN-211ENST00000572174 HPS5Q9UPZ3 1129 aa16.44■□□□□ 0.22
RPAIN-211ENST00000572174 IVNS1ABPQ9Y6Y0 642 aa16.44■□□□□ 0.22
RPAIN-211ENST00000572174 NDUFB10O96000 172 aa16.43■□□□□ 0.22
RPAIN-211ENST00000572174 TOP1P11387 765 aaKnown RBP16.43■□□□□ 0.22
RPAIN-211ENST00000572174 DSG3P32926 999 aa16.43■□□□□ 0.22
RPAIN-211ENST00000572174 FAM83BQ5T0W9 1011 aa16.43■□□□□ 0.22
RPAIN-211ENST00000572174 RNF20Q5VTR2 975 aa16.43■□□□□ 0.22
RPAIN-211ENST00000572174 SLAIN1Q8ND83 568 aa16.43■□□□□ 0.22
RPAIN-211ENST00000572174 GMCL1Q96IK5 515 aa16.43■□□□□ 0.22
RPAIN-211ENST00000572174 SLF1Q9BQI6 1058 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms