RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 MOV10L1Q9BXT6 1211 aaKnown RBP24.18■■□□□ 1.46
CCDC40-206ENST00000572083 ANTXR1Q9H6X2 564 aa24.18■■□□□ 1.46
CCDC40-206ENST00000572083 EVX2Q03828 476 aa24.17■■□□□ 1.46
CCDC40-206ENST00000572083 SLC39A5Q6ZMH5 540 aa24.17■■□□□ 1.46
CCDC40-206ENST00000572083 ARRDC4Q8NCT1 418 aa24.17■■□□□ 1.46
CCDC40-206ENST00000572083 EAF2Q96CJ1 260 aaPredicted RBP24.17■■□□□ 1.46
CCDC40-206ENST00000572083 TRIM60Q495X7 471 aa24.16■■□□□ 1.46
CCDC40-206ENST00000572083 OLFML2BQ68BL8 750 aa24.16■■□□□ 1.46
CCDC40-206ENST00000572083 BADQ92934 168 aa24.16■■□□□ 1.46
CCDC40-206ENST00000572083 TANGO6Q9C0B7 1094 aa24.16■■□□□ 1.46
CCDC40-206ENST00000572083 SPATC1LQ9H0A9 340 aa24.16■■□□□ 1.46
CCDC40-206ENST00000572083 A0A1W2PRG0 241 aa24.15■■□□□ 1.46
CCDC40-206ENST00000572083 MPHOSPH10O00566 681 aaKnown RBP24.15■■□□□ 1.46
CCDC40-206ENST00000572083 POLR3DP05423 398 aaPredicted RBP24.15■■□□□ 1.46
CCDC40-206ENST00000572083 ERCC3P19447 782 aa24.15■■□□□ 1.46
CCDC40-206ENST00000572083 MAFAQ8NHW3 353 aaPredicted RBP24.15■■□□□ 1.46
CCDC40-206ENST00000572083 PDLIM7Q9NR12 457 aa24.15■■□□□ 1.46
CCDC40-206ENST00000572083 SEPT4O43236 478 aa24.14■■□□□ 1.45
CCDC40-206ENST00000572083 COBLO75128 1261 aa24.14■■□□□ 1.45
CCDC40-206ENST00000572083 MAP3K12Q12852 859 aa24.14■■□□□ 1.45
CCDC40-206ENST00000572083 COG2Q14746 738 aa24.14■■□□□ 1.45
CCDC40-206ENST00000572083 PRAMEF19Q5SWL8 479 aa24.14■■□□□ 1.45
CCDC40-206ENST00000572083 RIOK1Q9BRS2 568 aaKnown RBP24.14■■□□□ 1.45
CCDC40-206ENST00000572083 SEMA6BQ9H3T3 888 aa24.14■■□□□ 1.45
CCDC40-206ENST00000572083 ADCYAP1R1P41586 468 aa24.13■■□□□ 1.45
CCDC40-206ENST00000572083 SNX17Q15036 470 aa24.13■■□□□ 1.45
CCDC40-206ENST00000572083 SH3RF1Q7Z6J0 888 aa24.13■■□□□ 1.45
CCDC40-206ENST00000572083 MYLIPQ8WY64 445 aa24.13■■□□□ 1.45
CCDC40-206ENST00000572083 FERMT2Q96AC1 680 aa24.13■■□□□ 1.45
CCDC40-206ENST00000572083 NOP58Q9Y2X3 529 aaKnown RBP24.13■■□□□ 1.45
CCDC40-206ENST00000572083 STRNO43815 780 aa24.12■■□□□ 1.45
CCDC40-206ENST00000572083 GABPAQ06546 454 aa24.12■■□□□ 1.45
CCDC40-206ENST00000572083 PLS1Q14651 629 aa24.12■■□□□ 1.45
CCDC40-206ENST00000572083 ZKSCAN2Q63HK3 967 aa24.12■■□□□ 1.45
CCDC40-206ENST00000572083 TTYH1Q9H313 450 aaPredicted RBP24.12■■□□□ 1.45
CCDC40-206ENST00000572083 HOXC10Q9NYD6 342 aa24.12■■□□□ 1.45
CCDC40-206ENST00000572083 TRIM43BA6NCK2 446 aa24.11■■□□□ 1.45
CCDC40-206ENST00000572083 LRRC41Q15345 812 aa24.11■■□□□ 1.45
CCDC40-206ENST00000572083 FAM47AQ5JRC9 791 aa24.11■■□□□ 1.45
CCDC40-206ENST00000572083 KIAA1755Q5JYT7 1200 aa24.11■■□□□ 1.45
CCDC40-206ENST00000572083 SHCBP1Q8NEM2 672 aa24.11■■□□□ 1.45
CCDC40-206ENST00000572083 TRIM43Q96BQ3 446 aaPredicted RBP24.11■■□□□ 1.45
CCDC40-206ENST00000572083 MCM9Q9NXL9 1143 aa24.11■■□□□ 1.45
CCDC40-206ENST00000572083 MUC3AQ02505 3323 aa24.1■■□□□ 1.45
CCDC40-206ENST00000572083 MAGEB6P1A0A0J9YX57 407 aa24.1■■□□□ 1.45
CCDC40-206ENST00000572083 NCAPG2Q86XI2 1143 aa24.1■■□□□ 1.45
CCDC40-206ENST00000572083 CLEC10AQ8IUN9 316 aa24.1■■□□□ 1.45
CCDC40-206ENST00000572083 SMAD3P84022 425 aaKnown RBP24.09■■□□□ 1.45
CCDC40-206ENST00000572083 SAMD1Q6SPF0 538 aaPredicted RBP24.09■■□□□ 1.45
CCDC40-206ENST00000572083 SLC44A5Q8NCS7 719 aa24.09■■□□□ 1.45
CCDC40-206ENST00000572083 ATG4CQ96DT6 458 aa24.09■■□□□ 1.45
CCDC40-206ENST00000572083 MAML3Q96JK9 1138 aa24.09■■□□□ 1.45
CCDC40-206ENST00000572083 CRNKL1Q9BZJ0 848 aaKnown RBP24.09■■□□□ 1.45
CCDC40-206ENST00000572083 SLC5A4Q9NY91 659 aa24.09■■□□□ 1.45
CCDC40-206ENST00000572083 FLOT1O75955 427 aa24.08■■□□□ 1.45
CCDC40-206ENST00000572083 DSG3P32926 999 aa24.08■■□□□ 1.45
CCDC40-206ENST00000572083 AACSQ86V21 672 aa24.08■■□□□ 1.45
CCDC40-206ENST00000572083 SPICE1Q8N0Z3 855 aa24.08■■□□□ 1.45
CCDC40-206ENST00000572083 MB21D1Q8N884 522 aa24.08■■□□□ 1.45
CCDC40-206ENST00000572083 SDR42E1Q8WUS8 393 aa24.08■■□□□ 1.45
CCDC40-206ENST00000572083 MROH8Q9H579 483 aa24.08■■□□□ 1.45
CCDC40-206ENST00000572083 CYP2D6P10635 497 aa24.07■■□□□ 1.44
CCDC40-206ENST00000572083 FOSL2P15408 326 aa24.07■■□□□ 1.44
CCDC40-206ENST00000572083 ITGB8P26012 769 aa24.07■■□□□ 1.44
CCDC40-206ENST00000572083 TLE2Q04725 743 aa24.07■■□□□ 1.44
CCDC40-206ENST00000572083 TMED8Q6PL24 325 aaPredicted RBP24.07■■□□□ 1.44
CCDC40-206ENST00000572083 ITPRIPQ8IWB1 547 aa24.07■■□□□ 1.44
CCDC40-206ENST00000572083 EXOC6BQ9Y2D4 811 aa24.07■■□□□ 1.44
CCDC40-206ENST00000572083 PARP14Q460N5 1801 aa24.06■■□□□ 1.44
CCDC40-206ENST00000572083 PDE6AP16499 860 aa24.06■■□□□ 1.44
CCDC40-206ENST00000572083 SLC9C2Q5TAH2 1124 aa24.06■■□□□ 1.44
CCDC40-206ENST00000572083 C1orf53Q5VUE5 145 aa24.06■■□□□ 1.44
CCDC40-206ENST00000572083 TMEM179Q6ZVK1 233 aa24.06■■□□□ 1.44
CCDC40-206ENST00000572083 FTSJ3Q8IY81 847 aaKnown RBP24.06■■□□□ 1.44
CCDC40-206ENST00000572083 ABRAQ8N0Z2 381 aa24.06■■□□□ 1.44
CCDC40-206ENST00000572083 MYH8P13535 1937 aa24.06■■□□□ 1.44
CCDC40-206ENST00000572083 FCER1AP12319 257 aa24.05■■□□□ 1.44
CCDC40-206ENST00000572083 DYNLL2Q96FJ2 89 aa24.05■■□□□ 1.44
CCDC40-206ENST00000572083 RNPC3Q96LT9 517 aaKnown RBP24.05■■□□□ 1.44
CCDC40-206ENST00000572083 DCP1AQ9NPI6 582 aaPredicted RBP24.05■■□□□ 1.44
CCDC40-206ENST00000572083 XPNPEP3Q9NQH7 507 aa24.05■■□□□ 1.44
CCDC40-206ENST00000572083 CLTBP09497 229 aa24.04■■□□□ 1.44
CCDC40-206ENST00000572083 EPHB4P54760 987 aa24.04■■□□□ 1.44
CCDC40-206ENST00000572083 ICA1Q05084 483 aa24.04■■□□□ 1.44
CCDC40-206ENST00000572083 LCORLQ8N3X6 602 aa24.04■■□□□ 1.44
CCDC40-206ENST00000572083 PHF24Q9UPV7 400 aa24.04■■□□□ 1.44
CCDC40-206ENST00000572083 COL11A1P12107 1806 aaPredicted RBP24.04■■□□□ 1.44
CCDC40-206ENST00000572083 ZNF532Q9HCE3 1301 aa24.04■■□□□ 1.44
CCDC40-206ENST00000572083 PGK1P00558 417 aa24.03■■□□□ 1.44
CCDC40-206ENST00000572083 PGK2P07205 417 aa24.03■■□□□ 1.44
CCDC40-206ENST00000572083 RARBP10826 455 aa24.03■■□□□ 1.44
CCDC40-206ENST00000572083 RLBP1P12271 317 aa24.03■■□□□ 1.44
CCDC40-206ENST00000572083 AKR1B1P15121 316 aa24.03■■□□□ 1.44
CCDC40-206ENST00000572083 TMEM132BQ14DG7 1078 aa24.03■■□□□ 1.44
CCDC40-206ENST00000572083 CEP85Q6P2H3 762 aa24.03■■□□□ 1.44
CCDC40-206ENST00000572083 SIAH1Q8IUQ4 282 aa24.03■■□□□ 1.44
CCDC40-206ENST00000572083 VCPKMTQ9H867 229 aa24.03■■□□□ 1.44
CCDC40-206ENST00000572083 ARHGEF10LQ9HCE6 1279 aa24.03■■□□□ 1.44
CCDC40-206ENST00000572083 IL1RAPL2Q9NP60 686 aa24.03■■□□□ 1.44
CCDC40-206ENST00000572083 PQBP1O60828 265 aaKnown RBP24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms