RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 RANBP6O60518 1105 aaKnown RBP10.3□□□□□ -0.76
TRAPPC1-203ENST00000571739 CYP21A2P08686 494 aa10.3□□□□□ -0.76
TRAPPC1-203ENST00000571739 OSBPP22059 807 aa10.3□□□□□ -0.76
TRAPPC1-203ENST00000571739 KLRC3Q07444 240 aa10.3□□□□□ -0.76
TRAPPC1-203ENST00000571739 USP17L24Q0WX57 530 aa10.3□□□□□ -0.76
TRAPPC1-203ENST00000571739 PABPC4Q13310 644 aaKnown RBP eCLIP10.3□□□□□ -0.764e-7■■■■■ 32.1
TRAPPC1-203ENST00000571739 RRP12Q5JTH9 1297 aaKnown RBP10.3□□□□□ -0.76
TRAPPC1-203ENST00000571739 SPICE1Q8N0Z3 855 aa10.3□□□□□ -0.76
TRAPPC1-203ENST00000571739 ANKRD13CQ8N6S4 541 aa10.3□□□□□ -0.76
TRAPPC1-203ENST00000571739 ARHGAP39Q9C0H5 1083 aa10.3□□□□□ -0.76
TRAPPC1-203ENST00000571739 RPAP3Q9H6T3 665 aaPredicted RBP10.3□□□□□ -0.76
TRAPPC1-203ENST00000571739 TXNRD2Q9NNW7 524 aa10.3□□□□□ -0.76
TRAPPC1-203ENST00000571739 TCP11L1Q9NUJ3 509 aa10.3□□□□□ -0.76
TRAPPC1-203ENST00000571739 ZSWIM5Q9P217 1185 aa10.3□□□□□ -0.76
TRAPPC1-203ENST00000571739 MYH8P13535 1937 aa10.3□□□□□ -0.76
TRAPPC1-203ENST00000571739 NEDD4P46934 1319 aa10.3□□□□□ -0.76
TRAPPC1-203ENST00000571739 PLIN4Q96Q06 1357 aa10.29□□□□□ -0.76
TRAPPC1-203ENST00000571739 CDC45O75419 566 aa10.29□□□□□ -0.76
TRAPPC1-203ENST00000571739 ECM2O94769 699 aaPredicted RBP10.29□□□□□ -0.76
TRAPPC1-203ENST00000571739 TTLL1O95922 423 aa10.29□□□□□ -0.76
TRAPPC1-203ENST00000571739 PCP11498 1178 aaKnown RBP10.29□□□□□ -0.76
TRAPPC1-203ENST00000571739 HERVK_113P62684 666 aa10.29□□□□□ -0.76
TRAPPC1-203ENST00000571739 LACTBP83111 547 aaPredicted RBP10.29□□□□□ -0.76
TRAPPC1-203ENST00000571739 COG2Q14746 738 aa10.29□□□□□ -0.76
TRAPPC1-203ENST00000571739 NECTIN1Q15223 517 aa10.29□□□□□ -0.76
TRAPPC1-203ENST00000571739 IMMTQ16891 758 aaKnown RBP10.29□□□□□ -0.76
TRAPPC1-203ENST00000571739 OTOP1Q7RTM1 612 aa10.29□□□□□ -0.76
TRAPPC1-203ENST00000571739 SMCR8Q8TEV9 937 aaPredicted RBP10.29□□□□□ -0.76
TRAPPC1-203ENST00000571739 TOMM22Q9NS69 142 aa10.29□□□□□ -0.76
TRAPPC1-203ENST00000571739 PNMA3Q9UL41 463 aa10.29□□□□□ -0.76
TRAPPC1-203ENST00000571739 U3KPZ7 1027 aaPredicted RBP10.29□□□□□ -0.76
TRAPPC1-203ENST00000571739 LOC285556D6RIA3 1793 aa10.29□□□□□ -0.76
TRAPPC1-203ENST00000571739 B4E1Z4 1266 aa10.28□□□□□ -0.76
TRAPPC1-203ENST00000571739 CNMDO75829 334 aa10.28□□□□□ -0.76
TRAPPC1-203ENST00000571739 NDUFB10O96000 172 aa10.28□□□□□ -0.76
TRAPPC1-203ENST00000571739 DSG3P32926 999 aa10.28□□□□□ -0.76
TRAPPC1-203ENST00000571739 GCLCP48506 637 aaPredicted RBP10.28□□□□□ -0.76
TRAPPC1-203ENST00000571739 IRX3P78415 501 aaPredicted RBP10.28□□□□□ -0.76
TRAPPC1-203ENST00000571739 RCSD1Q6JBY9 416 aa10.28□□□□□ -0.76
TRAPPC1-203ENST00000571739 KIAA1211Q6ZU35 1233 aa10.28□□□□□ -0.76
TRAPPC1-203ENST00000571739 STOX1Q6ZVD7 989 aa10.28□□□□□ -0.76
TRAPPC1-203ENST00000571739 CTU1Q7Z7A3 348 aaKnown RBP10.28□□□□□ -0.76
TRAPPC1-203ENST00000571739 LRRC47Q8N1G4 583 aaKnown RBP10.28□□□□□ -0.76
TRAPPC1-203ENST00000571739 LPAR1Q92633 364 aa10.28□□□□□ -0.76
TRAPPC1-203ENST00000571739 ERO1AQ96HE7 468 aa10.28□□□□□ -0.76
TRAPPC1-203ENST00000571739 NUP88Q99567 741 aaPredicted RBP10.28□□□□□ -0.76
TRAPPC1-203ENST00000571739 ZKSCAN3Q9BRR0 538 aa10.28□□□□□ -0.76
TRAPPC1-203ENST00000571739 MCOLN1Q9GZU1 580 aa10.28□□□□□ -0.76
TRAPPC1-203ENST00000571739 RNF41Q9H4P4 317 aaPredicted RBP10.28□□□□□ -0.76
TRAPPC1-203ENST00000571739 RBM8AQ9Y5S9 174 aaKnown RBP10.28□□□□□ -0.76
TRAPPC1-203ENST00000571739 SPDYE16A6NNV3 312 aaPredicted RBP10.27□□□□□ -0.77
TRAPPC1-203ENST00000571739 E7EWF7 191 aa10.27□□□□□ -0.77
TRAPPC1-203ENST00000571739 WDR46O15213 610 aaKnown RBP10.27□□□□□ -0.77
TRAPPC1-203ENST00000571739 KDM4AO75164 1064 aa10.27□□□□□ -0.77
TRAPPC1-203ENST00000571739 PSMC4P43686 418 aa10.27□□□□□ -0.77
TRAPPC1-203ENST00000571739 COL9A3Q14050 684 aaPredicted RBP10.27□□□□□ -0.77
TRAPPC1-203ENST00000571739 FAM110CQ1W6H9 321 aa10.27□□□□□ -0.77
TRAPPC1-203ENST00000571739 FAM83BQ5T0W9 1011 aa10.27□□□□□ -0.77
TRAPPC1-203ENST00000571739 LBX2Q6XYB7 198 aa10.27□□□□□ -0.77
TRAPPC1-203ENST00000571739 ESR2Q92731 530 aa10.27□□□□□ -0.77
TRAPPC1-203ENST00000571739 TRIM47Q96LD4 638 aa10.27□□□□□ -0.77
TRAPPC1-203ENST00000571739 TTC14Q96N46 770 aa10.27□□□□□ -0.77
TRAPPC1-203ENST00000571739 TMEM47Q9BQJ4 181 aa10.27□□□□□ -0.77
TRAPPC1-203ENST00000571739 SH2D4AQ9H788 454 aa10.27□□□□□ -0.77
TRAPPC1-203ENST00000571739 EFCC1Q9HA90 598 aa10.27□□□□□ -0.77
TRAPPC1-203ENST00000571739 GOPCQ9HD26 462 aa10.27□□□□□ -0.77
TRAPPC1-203ENST00000571739 FBXO28Q9NVF7 368 aa10.27□□□□□ -0.77
TRAPPC1-203ENST00000571739 HOXC10Q9NYD6 342 aa10.27□□□□□ -0.77
TRAPPC1-203ENST00000571739 BTBD7Q9P203 1132 aa10.27□□□□□ -0.77
TRAPPC1-203ENST00000571739 MORF4L1Q9UBU8 362 aa10.27□□□□□ -0.77
TRAPPC1-203ENST00000571739 SYNPO2Q9UMS6 1093 aa10.27□□□□□ -0.77
TRAPPC1-203ENST00000571739 ADAMTS5Q9UNA0 930 aa10.27□□□□□ -0.77
TRAPPC1-203ENST00000571739 STX8Q9UNK0 236 aa10.27□□□□□ -0.77
TRAPPC1-203ENST00000571739 TRIM17Q9Y577 477 aa10.27□□□□□ -0.77
TRAPPC1-203ENST00000571739 SLC27A2O14975 620 aa10.26□□□□□ -0.77
TRAPPC1-203ENST00000571739 RAD21O60216 631 aa10.26□□□□□ -0.77
TRAPPC1-203ENST00000571739 MCCP23508 829 aa10.26□□□□□ -0.77
TRAPPC1-203ENST00000571739 SLFN13Q68D06 897 aa10.26□□□□□ -0.77
TRAPPC1-203ENST00000571739 CYB5R4Q7L1T6 521 aa10.26□□□□□ -0.77
TRAPPC1-203ENST00000571739 TNS4Q8IZW8 715 aa10.26□□□□□ -0.77
TRAPPC1-203ENST00000571739 GMCL1P1Q8NEA9 526 aa10.26□□□□□ -0.77
TRAPPC1-203ENST00000571739 GPRC5AQ8NFJ5 357 aa10.26□□□□□ -0.77
TRAPPC1-203ENST00000571739 ANKS1AQ92625 1134 aa10.26□□□□□ -0.77
TRAPPC1-203ENST00000571739 CHMP4CQ96CF2 233 aa10.26□□□□□ -0.77
TRAPPC1-203ENST00000571739 ATG4CQ96DT6 458 aa10.26□□□□□ -0.77
TRAPPC1-203ENST00000571739 KRT23Q9C075 422 aa10.26□□□□□ -0.77
TRAPPC1-203ENST00000571739 ANO2Q9NQ90 1003 aa10.26□□□□□ -0.77
TRAPPC1-203ENST00000571739 PTPN22Q9Y2R2 807 aa10.26□□□□□ -0.77
TRAPPC1-203ENST00000571739 RLFQ13129 1914 aa10.26□□□□□ -0.77
TRAPPC1-203ENST00000571739 DOCK3Q8IZD9 2030 aa10.25□□□□□ -0.77
TRAPPC1-203ENST00000571739 FLOT1O75955 427 aa10.25□□□□□ -0.77
TRAPPC1-203ENST00000571739 FMNL1O95466 1100 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC1-203ENST00000571739 TOP1P11387 765 aaKnown RBP10.25□□□□□ -0.77
TRAPPC1-203ENST00000571739 ERVK-9P63128 1117 aa10.25□□□□□ -0.77
TRAPPC1-203ENST00000571739 ERVK-24P63145 666 aa10.25□□□□□ -0.77
TRAPPC1-203ENST00000571739 SEC23AQ15436 765 aa10.25□□□□□ -0.77
TRAPPC1-203ENST00000571739 PKN2Q16513 984 aaKnown RBP10.25□□□□□ -0.77
TRAPPC1-203ENST00000571739 CREB3L3Q68CJ9 461 aa10.25□□□□□ -0.77
TRAPPC1-203ENST00000571739 RASGRP2Q7LDG7 609 aa10.25□□□□□ -0.77
TRAPPC1-203ENST00000571739 DGKHQ86XP1 1220 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms