RNA–Protein interactions for RNA: ENST00000571186.5

CIITA-205, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 1,041 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-205ENST00000571186 DNM1LO00429 736 aa17.35■□□□□ 0.37
CIITA-205ENST00000571186 RTP1P59025 263 aa17.35■□□□□ 0.37
CIITA-205ENST00000571186 GJC2Q5T442 439 aaPredicted RBP17.35■□□□□ 0.37
CIITA-205ENST00000571186 TMED8Q6PL24 325 aaPredicted RBP17.35■□□□□ 0.37
CIITA-205ENST00000571186 AACSQ86V21 672 aa17.35■□□□□ 0.37
CIITA-205ENST00000571186 ARRDC4Q8NCT1 418 aa17.35■□□□□ 0.37
CIITA-205ENST00000571186 FAM161BQ96MY7 647 aa17.35■□□□□ 0.37
CIITA-205ENST00000571186 RIOK1Q9BRS2 568 aaKnown RBP17.35■□□□□ 0.37
CIITA-205ENST00000571186 ATP11BQ9Y2G3 1177 aa17.35■□□□□ 0.37
CIITA-205ENST00000571186 STRNO43815 780 aa17.34■□□□□ 0.37
CIITA-205ENST00000571186 MYCNP04198 464 aaPredicted RBP17.34■□□□□ 0.37
CIITA-205ENST00000571186 ADORA2AP29274 412 aa17.34■□□□□ 0.37
CIITA-205ENST00000571186 ANO1Q5XXA6 986 aa17.34■□□□□ 0.37
CIITA-205ENST00000571186 FAM109BQ6ICB4 259 aaPredicted RBP17.34■□□□□ 0.37
CIITA-205ENST00000571186 MOV10L1Q9BXT6 1211 aaKnown RBP17.34■□□□□ 0.37
CIITA-205ENST00000571186 CRNKL1Q9BZJ0 848 aaKnown RBP17.34■□□□□ 0.37
CIITA-205ENST00000571186 TANGO6Q9C0B7 1094 aa17.34■□□□□ 0.37
CIITA-205ENST00000571186 MCM9Q9NXL9 1143 aa17.34■□□□□ 0.37
CIITA-205ENST00000571186 DDX19BQ9UMR2 479 aa17.34■□□□□ 0.37
CIITA-205ENST00000571186 EXOC6BQ9Y2D4 811 aa17.34■□□□□ 0.37
CIITA-205ENST00000571186 A0A1W2PRG0 241 aa17.33■□□□□ 0.36
CIITA-205ENST00000571186 CYBAP13498 195 aa17.33■□□□□ 0.36
CIITA-205ENST00000571186 SLC9C2Q5TAH2 1124 aa17.33■□□□□ 0.36
CIITA-205ENST00000571186 ERC1Q8IUD2 1116 aa17.33■□□□□ 0.36
CIITA-205ENST00000571186 SPATC1LQ9H0A9 340 aa17.33■□□□□ 0.36
CIITA-205ENST00000571186 ZBTB40Q9NUA8 1239 aa17.33■□□□□ 0.36
CIITA-205ENST00000571186 BAZ2AQ9UIF9 1905 aaKnown RBP17.33■□□□□ 0.36
CIITA-205ENST00000571186 KBTBD13C9JR72 458 aa17.32■□□□□ 0.36
CIITA-205ENST00000571186 ERCC3P19447 782 aa17.32■□□□□ 0.36
CIITA-205ENST00000571186 EVX2Q03828 476 aa17.32■□□□□ 0.36
CIITA-205ENST00000571186 GABPAQ06546 454 aa17.32■□□□□ 0.36
CIITA-205ENST00000571186 PLS1Q14651 629 aa17.32■□□□□ 0.36
CIITA-205ENST00000571186 TTF1Q15361 905 aaPredicted RBP17.32■□□□□ 0.36
CIITA-205ENST00000571186 OLFML2BQ68BL8 750 aa17.32■□□□□ 0.36
CIITA-205ENST00000571186 SLC39A5Q6ZMH5 540 aa17.32■□□□□ 0.36
CIITA-205ENST00000571186 IL1RAPL2Q9NP60 686 aa17.32■□□□□ 0.36
CIITA-205ENST00000571186 LTBP2Q14767 1821 aa17.32■□□□□ 0.36
CIITA-205ENST00000571186 COL11A1P12107 1806 aaPredicted RBP17.31■□□□□ 0.36
CIITA-205ENST00000571186 EYSQ5T1H1 3165 aa17.31■□□□□ 0.36
CIITA-205ENST00000571186 PRUNE2Q8WUY3 3088 aa17.31■□□□□ 0.36
CIITA-205ENST00000571186 COBLO75128 1261 aa17.31■□□□□ 0.36
CIITA-205ENST00000571186 IGHA2P01877 340 aa17.31■□□□□ 0.36
CIITA-205ENST00000571186 PDE6AP16499 860 aa17.31■□□□□ 0.36
CIITA-205ENST00000571186 PRAMEF19Q5SWL8 479 aa17.31■□□□□ 0.36
CIITA-205ENST00000571186 SAMD1Q6SPF0 538 aaPredicted RBP17.31■□□□□ 0.36
CIITA-205ENST00000571186 GUCD1Q96NT3 240 aa17.31■□□□□ 0.36
CIITA-205ENST00000571186 BCL11AQ9H165 835 aa17.31■□□□□ 0.36
CIITA-205ENST00000571186 PRDM5Q9NQX1 630 aaPredicted RBP17.31■□□□□ 0.36
CIITA-205ENST00000571186 SLC5A4Q9NY91 659 aa17.31■□□□□ 0.36
CIITA-205ENST00000571186 ZNF236Q9UL36 1845 aa17.31■□□□□ 0.36
CIITA-205ENST00000571186 SEPT4O43236 478 aa17.3■□□□□ 0.36
CIITA-205ENST00000571186 RRP1P56182 461 aaKnown RBP17.3■□□□□ 0.36
CIITA-205ENST00000571186 SHHQ15465 462 aa17.3■□□□□ 0.36
CIITA-205ENST00000571186 KIAA1755Q5JYT7 1200 aa17.3■□□□□ 0.36
CIITA-205ENST00000571186 ZNF697Q5TEC3 545 aa17.3■□□□□ 0.36
CIITA-205ENST00000571186 NCAPG2Q86XI2 1143 aa17.3■□□□□ 0.36
CIITA-205ENST00000571186 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.3■□□□□ 0.36
CIITA-205ENST00000571186 SIRT2Q8IXJ6 389 aa17.3■□□□□ 0.36
CIITA-205ENST00000571186 SHCBP1Q8NEM2 672 aa17.3■□□□□ 0.36
CIITA-205ENST00000571186 SDR42E1Q8WUS8 393 aa17.3■□□□□ 0.36
CIITA-205ENST00000571186 PLXNA1Q9UIW2 1896 aa17.29■□□□□ 0.36
CIITA-205ENST00000571186 ZNF532Q9HCE3 1301 aa17.29■□□□□ 0.36
CIITA-205ENST00000571186 FLOT1O75955 427 aa17.29■□□□□ 0.36
CIITA-205ENST00000571186 CYP2D6P10635 497 aa17.29■□□□□ 0.36
CIITA-205ENST00000571186 DSG3P32926 999 aa17.29■□□□□ 0.36
CIITA-205ENST00000571186 ADCYAP1R1P41586 468 aa17.29■□□□□ 0.36
CIITA-205ENST00000571186 HSP90AB4PQ58FF6 505 aa17.29■□□□□ 0.36
CIITA-205ENST00000571186 TMEM179Q6ZVK1 233 aa17.29■□□□□ 0.36
CIITA-205ENST00000571186 MB21D1Q8N884 522 aa17.29■□□□□ 0.36
CIITA-205ENST00000571186 SLC44A5Q8NCS7 719 aa17.29■□□□□ 0.36
CIITA-205ENST00000571186 FERMT2Q96AC1 680 aa17.29■□□□□ 0.36
CIITA-205ENST00000571186 DNAJC2Q99543 621 aaKnown RBP17.29■□□□□ 0.36
CIITA-205ENST00000571186 COL25A1Q9BXS0 654 aaPredicted RBP17.29■□□□□ 0.36
CIITA-205ENST00000571186 MROH8Q9H579 483 aa17.29■□□□□ 0.36
CIITA-205ENST00000571186 DCP1AQ9NPI6 582 aaPredicted RBP17.29■□□□□ 0.36
CIITA-205ENST00000571186 PARP14Q460N5 1801 aa17.28■□□□□ 0.36
CIITA-205ENST00000571186 APBB1O00213 710 aa17.28■□□□□ 0.36
CIITA-205ENST00000571186 GOLIM4O00461 696 aa17.28■□□□□ 0.36
CIITA-205ENST00000571186 TRIM60Q495X7 471 aa17.28■□□□□ 0.36
CIITA-205ENST00000571186 SPICE1Q8N0Z3 855 aa17.28■□□□□ 0.36
CIITA-205ENST00000571186 RHPN1Q8TCX5 695 aa17.28■□□□□ 0.36
CIITA-205ENST00000571186 BADQ92934 168 aa17.28■□□□□ 0.36
CIITA-205ENST00000571186 ATG4CQ96DT6 458 aa17.28■□□□□ 0.36
CIITA-205ENST00000571186 DYNLL2Q96FJ2 89 aa17.28■□□□□ 0.36
CIITA-205ENST00000571186 ARHGEF10LQ9HCE6 1279 aa17.28■□□□□ 0.36
CIITA-205ENST00000571186 MYO9BQ13459 2157 aa17.28■□□□□ 0.36
CIITA-205ENST00000571186 A0A0G2JMZ2 1700 aa17.27■□□□□ 0.36
CIITA-205ENST00000571186 FCER1AP12319 257 aa17.27■□□□□ 0.36
CIITA-205ENST00000571186 LRRC41Q15345 812 aa17.27■□□□□ 0.36
CIITA-205ENST00000571186 C9orf50Q5SZB4 431 aa17.27■□□□□ 0.36
CIITA-205ENST00000571186 CLEC10AQ8IUN9 316 aa17.27■□□□□ 0.36
CIITA-205ENST00000571186 ABRAQ8N0Z2 381 aa17.27■□□□□ 0.36
CIITA-205ENST00000571186 LCORLQ8N3X6 602 aa17.27■□□□□ 0.36
CIITA-205ENST00000571186 ARMT1Q9H993 441 aa17.27■□□□□ 0.36
CIITA-205ENST00000571186 SWAP70Q9UH65 585 aa17.27■□□□□ 0.36
CIITA-205ENST00000571186 TCRBV5S4A2TA0A5A2 114 aa17.26■□□□□ 0.35
CIITA-205ENST00000571186 AKR1B1P15121 316 aa17.26■□□□□ 0.35
CIITA-205ENST00000571186 ICA1Q05084 483 aa17.26■□□□□ 0.35
CIITA-205ENST00000571186 SIAH1Q8IUQ4 282 aa17.26■□□□□ 0.35
CIITA-205ENST00000571186 RPAP2Q8IXW5 612 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms