RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 HMGCRP04035 888 aa18.1■□□□□ 0.49
RAB40B-203ENST00000570676 MAPK4P31152 587 aa18.1■□□□□ 0.49
RAB40B-203ENST00000570676 KIAA1755Q5JYT7 1200 aa18.1■□□□□ 0.49
RAB40B-203ENST00000570676 SIAH1Q8IUQ4 282 aa18.1■□□□□ 0.49
RAB40B-203ENST00000570676 AMOTL1Q8IY63 956 aa18.1■□□□□ 0.49
RAB40B-203ENST00000570676 TRIB2Q92519 343 aa18.1■□□□□ 0.49
RAB40B-203ENST00000570676 DDRGK1Q96HY6 314 aa18.1■□□□□ 0.49
RAB40B-203ENST00000570676 EPB41L4AQ9HCS5 686 aaPredicted RBP18.1■□□□□ 0.49
RAB40B-203ENST00000570676 RABGAP1Q9Y3P9 1069 aa18.1■□□□□ 0.49
RAB40B-203ENST00000570676 ERC2O15083 957 aa18.09■□□□□ 0.49
RAB40B-203ENST00000570676 GPAA1O43292 621 aa18.09■□□□□ 0.49
RAB40B-203ENST00000570676 ZFYP08048 801 aaPredicted RBP18.09■□□□□ 0.49
RAB40B-203ENST00000570676 MX1P20591 662 aa18.09■□□□□ 0.49
RAB40B-203ENST00000570676 ICA1Q05084 483 aa18.09■□□□□ 0.49
RAB40B-203ENST00000570676 TRIM32Q13049 653 aa18.09■□□□□ 0.49
RAB40B-203ENST00000570676 GPR142Q7Z601 462 aa18.09■□□□□ 0.49
RAB40B-203ENST00000570676 PLEKHM2Q8IWE5 1019 aa18.09■□□□□ 0.49
RAB40B-203ENST00000570676 SOCS4Q8WXH5 440 aa18.09■□□□□ 0.49
RAB40B-203ENST00000570676 USP6NLQ92738 828 aa18.09■□□□□ 0.49
RAB40B-203ENST00000570676 CCDC17Q96LX7 622 aa18.09■□□□□ 0.49
RAB40B-203ENST00000570676 GLRX3O76003 335 aaKnown RBP18.08■□□□□ 0.48
RAB40B-203ENST00000570676 SGPL1O95470 568 aa18.08■□□□□ 0.48
RAB40B-203ENST00000570676 SBK1Q52WX2 424 aa18.08■□□□□ 0.48
RAB40B-203ENST00000570676 GIMAP6Q6P9H5 292 aa18.08■□□□□ 0.48
RAB40B-203ENST00000570676 NUDT12Q9BQG2 462 aa18.08■□□□□ 0.48
RAB40B-203ENST00000570676 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.08■□□□□ 0.48
RAB40B-203ENST00000570676 BTBD7Q9P203 1132 aa18.08■□□□□ 0.48
RAB40B-203ENST00000570676 TMX2Q9Y320 296 aa18.08■□□□□ 0.48
RAB40B-203ENST00000570676 CYP2B6P20813 491 aa18.07■□□□□ 0.48
RAB40B-203ENST00000570676 PDE1AP54750 535 aa18.07■□□□□ 0.48
RAB40B-203ENST00000570676 MORN1Q5T089 497 aa18.07■□□□□ 0.48
RAB40B-203ENST00000570676 ARHGEF10LQ9HCE6 1279 aa18.07■□□□□ 0.48
RAB40B-203ENST00000570676 SLC34A2O95436 690 aa18.06■□□□□ 0.48
RAB40B-203ENST00000570676 XRCC5P13010 732 aaKnown RBP18.06■□□□□ 0.48
RAB40B-203ENST00000570676 PLEKHH3Q7Z736 793 aa18.06■□□□□ 0.48
RAB40B-203ENST00000570676 LPAR1Q92633 364 aa18.06■□□□□ 0.48
RAB40B-203ENST00000570676 DEFB118Q96PH6 123 aa18.06■□□□□ 0.48
RAB40B-203ENST00000570676 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.06■□□□□ 0.48
RAB40B-203ENST00000570676 TANGO6Q9C0B7 1094 aa18.06■□□□□ 0.48
RAB40B-203ENST00000570676 CRISPLD2Q9H0B8 497 aa18.06■□□□□ 0.48
RAB40B-203ENST00000570676 VCPKMTQ9H867 229 aa18.06■□□□□ 0.48
RAB40B-203ENST00000570676 STAP2Q9UGK3 403 aa18.06■□□□□ 0.48
RAB40B-203ENST00000570676 FARP2O94887 1054 aaPredicted RBP18.05■□□□□ 0.48
RAB40B-203ENST00000570676 RASA1P20936 1047 aa18.05■□□□□ 0.48
RAB40B-203ENST00000570676 MAP3K21Q5TCX8 1036 aa18.05■□□□□ 0.48
RAB40B-203ENST00000570676 SEC62Q99442 399 aaKnown RBP18.05■□□□□ 0.48
RAB40B-203ENST00000570676 APBA2Q99767 749 aa18.05■□□□□ 0.48
RAB40B-203ENST00000570676 FSD1Q9BTV5 496 aa18.05■□□□□ 0.48
RAB40B-203ENST00000570676 SH2D4AQ9H788 454 aa18.05■□□□□ 0.48
RAB40B-203ENST00000570676 RPTORQ8N122 1335 aa18.04■□□□□ 0.48
RAB40B-203ENST00000570676 EEF2P13639 858 aaKnown RBP18.04■□□□□ 0.48
RAB40B-203ENST00000570676 GNAT2P19087 354 aa18.04■□□□□ 0.48
RAB40B-203ENST00000570676 RGS2P41220 211 aa18.04■□□□□ 0.48
RAB40B-203ENST00000570676 CCNA1P78396 465 aa18.04■□□□□ 0.48
RAB40B-203ENST00000570676 CCL14Q16627 93 aa18.04■□□□□ 0.48
RAB40B-203ENST00000570676 LRRFIP1Q32MZ4 808 aaKnown RBP18.04■□□□□ 0.48
RAB40B-203ENST00000570676 ZMYM1Q5SVZ6 1142 aa18.04■□□□□ 0.48
RAB40B-203ENST00000570676 SPICE1Q8N0Z3 855 aa18.04■□□□□ 0.48
RAB40B-203ENST00000570676 OSBPL3Q9H4L5 887 aa18.04■□□□□ 0.48
RAB40B-203ENST00000570676 WDR46O15213 610 aaKnown RBP18.03■□□□□ 0.48
RAB40B-203ENST00000570676 ZKSCAN1P17029 563 aaPredicted RBP18.03■□□□□ 0.48
RAB40B-203ENST00000570676 DSG3P32926 999 aa18.03■□□□□ 0.48
RAB40B-203ENST00000570676 MAP2K5Q13163 448 aa18.03■□□□□ 0.48
RAB40B-203ENST00000570676 COG2Q14746 738 aa18.03■□□□□ 0.48
RAB40B-203ENST00000570676 CCAR1Q8IX12 1150 aaKnown RBP18.03■□□□□ 0.48
RAB40B-203ENST00000570676 KANSL2Q9H9L4 492 aa18.03■□□□□ 0.48
RAB40B-203ENST00000570676 MINDY4BA8MYZ0 360 aa18.02■□□□□ 0.48
RAB40B-203ENST00000570676 FOXP2O15409 715 aa18.02■□□□□ 0.48
RAB40B-203ENST00000570676 PRKAR2AP13861 404 aaKnown RBP18.02■□□□□ 0.48
RAB40B-203ENST00000570676 CAPN2P17655 700 aa18.02■□□□□ 0.48
RAB40B-203ENST00000570676 PTPREP23469 700 aa18.02■□□□□ 0.48
RAB40B-203ENST00000570676 TDO2P48775 406 aa18.02■□□□□ 0.48
RAB40B-203ENST00000570676 GRB14Q14449 540 aa18.02■□□□□ 0.48
RAB40B-203ENST00000570676 TRMT44Q8IYL2 757 aaKnown RBP18.02■□□□□ 0.48
RAB40B-203ENST00000570676 IFNL3Q8IZI9 196 aa18.02■□□□□ 0.48
RAB40B-203ENST00000570676 STK11IPQ8N1F8 1099 aa18.02■□□□□ 0.48
RAB40B-203ENST00000570676 ATG4CQ96DT6 458 aa18.02■□□□□ 0.48
RAB40B-203ENST00000570676 MOV10L1Q9BXT6 1211 aaKnown RBP18.02■□□□□ 0.48
RAB40B-203ENST00000570676 HMX1Q9NP08 348 aaPredicted RBP18.02■□□□□ 0.48
RAB40B-203ENST00000570676 PLIN4Q96Q06 1357 aa18.02■□□□□ 0.47
RAB40B-203ENST00000570676 ZNFX1Q9P2E3 1918 aaKnown RBP18.02■□□□□ 0.47
RAB40B-203ENST00000570676 PLXNA1Q9UIW2 1896 aa18.01■□□□□ 0.47
RAB40B-203ENST00000570676 IGKV6D-41A0A0C4DH26 115 aa18.01■□□□□ 0.47
RAB40B-203ENST00000570676 SLC15A5A6NIM6 579 aa18.01■□□□□ 0.47
RAB40B-203ENST00000570676 FLOT1O75955 427 aa18.01■□□□□ 0.47
RAB40B-203ENST00000570676 TTC22Q5TAA0 569 aa18.01■□□□□ 0.47
RAB40B-203ENST00000570676 MB21D1Q8N884 522 aa18.01■□□□□ 0.47
RAB40B-203ENST00000570676 DIS3LQ8TF46 1054 aaKnown RBP18.01■□□□□ 0.47
RAB40B-203ENST00000570676 CWC22Q9HCG8 908 aaKnown RBP18.01■□□□□ 0.47
RAB40B-203ENST00000570676 HOXC10Q9NYD6 342 aa18.01■□□□□ 0.47
RAB40B-203ENST00000570676 FLRT1Q9NZU1 646 aa18.01■□□□□ 0.47
RAB40B-203ENST00000570676 PATL2C9JE40 543 aaKnown RBP18■□□□□ 0.47
RAB40B-203ENST00000570676 TFRCP02786 760 aaKnown RBP18■□□□□ 0.47
RAB40B-203ENST00000570676 HOXC6P09630 235 aa18■□□□□ 0.47
RAB40B-203ENST00000570676 MNX1P50219 401 aaPredicted RBP18■□□□□ 0.47
RAB40B-203ENST00000570676 ATP2B2Q01814 1243 aa18■□□□□ 0.47
RAB40B-203ENST00000570676 CACNB2Q08289 660 aaPredicted RBP18■□□□□ 0.47
RAB40B-203ENST00000570676 WDR78Q5VTH9 848 aa18■□□□□ 0.47
RAB40B-203ENST00000570676 SHCBP1Q8NEM2 672 aa18■□□□□ 0.47
RAB40B-203ENST00000570676 HTATIP2Q9BUP3 242 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms