RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 CPLX1O14810 134 aa17.98■□□□□ 0.47
HERPUD1-219ENST00000570273 DHX16O60231 1041 aaKnown RBP17.98■□□□□ 0.47
HERPUD1-219ENST00000570273 NOL9Q5SY16 702 aaKnown RBP17.98■□□□□ 0.47
HERPUD1-219ENST00000570273 CCDC84Q86UT8 332 aaPredicted RBP17.98■□□□□ 0.47
HERPUD1-219ENST00000570273 INTS4Q96HW7 963 aaKnown RBP17.98■□□□□ 0.47
HERPUD1-219ENST00000570273 ATAD5Q96QE3 1844 aa17.98■□□□□ 0.47
HERPUD1-219ENST00000570273 CCDC196A0A1B0GTZ2 297 aa17.98■□□□□ 0.47
HERPUD1-219ENST00000570273 CDC27P30260 824 aa17.98■□□□□ 0.47
HERPUD1-219ENST00000570273 MAP3K9P80192 1104 aa17.98■□□□□ 0.47
HERPUD1-219ENST00000570273 GRM4Q14833 912 aa17.98■□□□□ 0.47
HERPUD1-219ENST00000570273 CPLX2Q6PUV4 134 aaKnown RBP17.98■□□□□ 0.47
HERPUD1-219ENST00000570273 ARMC9Q7Z3E5 817 aa17.98■□□□□ 0.47
HERPUD1-219ENST00000570273 SIAH1Q8IUQ4 282 aa17.98■□□□□ 0.47
HERPUD1-219ENST00000570273 FANCBQ8NB91 859 aa17.98■□□□□ 0.47
HERPUD1-219ENST00000570273 MKL1Q969V6 931 aa17.98■□□□□ 0.47
HERPUD1-219ENST00000570273 SH2D4AQ9H788 454 aa17.98■□□□□ 0.47
HERPUD1-219ENST00000570273 RBM28Q9NW13 759 aaKnown RBP17.98■□□□□ 0.47
HERPUD1-219ENST00000570273 SMC3Q9UQE7 1217 aa17.98■□□□□ 0.47
HERPUD1-219ENST00000570273 CSADQ9Y600 493 aa17.98■□□□□ 0.47
HERPUD1-219ENST00000570273 USP17L5A8MUK1 530 aa17.97■□□□□ 0.47
HERPUD1-219ENST00000570273 RAD21O60216 631 aa17.97■□□□□ 0.47
HERPUD1-219ENST00000570273 KIF5BP33176 963 aa17.97■□□□□ 0.47
HERPUD1-219ENST00000570273 ADD1P35611 737 aaKnown RBP17.97■□□□□ 0.47
HERPUD1-219ENST00000570273 C1QTNF8P60827 252 aa17.97■□□□□ 0.47
HERPUD1-219ENST00000570273 FMR1Q06787 632 aaKnown RBP eCLIP17.97■□□□□ 0.47
HERPUD1-219ENST00000570273 VGLL4Q14135 290 aa17.97■□□□□ 0.47
HERPUD1-219ENST00000570273 MOB2Q70IA6 237 aa17.97■□□□□ 0.47
HERPUD1-219ENST00000570273 RASGRP2Q7LDG7 609 aa17.97■□□□□ 0.47
HERPUD1-219ENST00000570273 ACER1Q8TDN7 264 aa17.97■□□□□ 0.47
HERPUD1-219ENST00000570273 FEZ1Q99689 392 aa17.97■□□□□ 0.47
HERPUD1-219ENST00000570273 PTPDC1A2A3K4 754 aa17.96■□□□□ 0.47
HERPUD1-219ENST00000570273 CDKL5O76039 1030 aa17.96■□□□□ 0.47
HERPUD1-219ENST00000570273 PPP2R5BQ15173 497 aa17.96■□□□□ 0.47
HERPUD1-219ENST00000570273 CCDC96Q2M329 555 aa17.96■□□□□ 0.47
HERPUD1-219ENST00000570273 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.96■□□□□ 0.47
HERPUD1-219ENST00000570273 NSUN7Q8NE18 718 aaKnown RBP17.96■□□□□ 0.47
HERPUD1-219ENST00000570273 MAP3K14Q99558 947 aa17.96■□□□□ 0.47
HERPUD1-219ENST00000570273 LLPHQ9BRT6 129 aaKnown RBP17.96■□□□□ 0.47
HERPUD1-219ENST00000570273 AS3MTQ9HBK9 375 aa17.96■□□□□ 0.47
HERPUD1-219ENST00000570273 FAM217BQ9NTX9 383 aaPredicted RBP17.96■□□□□ 0.47
HERPUD1-219ENST00000570273 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.96■□□□□ 0.47
HERPUD1-219ENST00000570273 SYNPO2Q9UMS6 1093 aa17.96■□□□□ 0.47
HERPUD1-219ENST00000570273 SNCAIPQ9Y6H5 919 aa17.96■□□□□ 0.47
HERPUD1-219ENST00000570273 PAPPA2Q9BXP8 1791 aa17.96■□□□□ 0.47
HERPUD1-219ENST00000570273 A0A1W2PRG0 241 aa17.95■□□□□ 0.46
HERPUD1-219ENST00000570273 JAK2O60674 1132 aa17.95■□□□□ 0.46
HERPUD1-219ENST00000570273 DTNBO60941 627 aa17.95■□□□□ 0.46
HERPUD1-219ENST00000570273 PARP1P09874 1014 aaKnown RBP17.95■□□□□ 0.46
HERPUD1-219ENST00000570273 PDHBP11177 359 aa17.95■□□□□ 0.46
HERPUD1-219ENST00000570273 PTPRAP18433 802 aa17.95■□□□□ 0.46
HERPUD1-219ENST00000570273 ECE1P42892 770 aa17.95■□□□□ 0.46
HERPUD1-219ENST00000570273 FSTL1Q12841 308 aa17.95■□□□□ 0.46
HERPUD1-219ENST00000570273 MAP3K11Q16584 847 aa17.95■□□□□ 0.46
HERPUD1-219ENST00000570273 SLFN13Q68D06 897 aa17.95■□□□□ 0.46
HERPUD1-219ENST00000570273 TMTC3Q6ZXV5 915 aa17.95■□□□□ 0.46
HERPUD1-219ENST00000570273 ANKRD13AQ8IZ07 590 aa17.95■□□□□ 0.46
HERPUD1-219ENST00000570273 GMCL1P1Q8NEA9 526 aa17.95■□□□□ 0.46
HERPUD1-219ENST00000570273 GOPCQ9HD26 462 aa17.95■□□□□ 0.46
HERPUD1-219ENST00000570273 ISY1Q9ULR0 285 aaKnown RBP17.95■□□□□ 0.46
HERPUD1-219ENST00000570273 TMX2Q9Y320 296 aa17.95■□□□□ 0.46
HERPUD1-219ENST00000570273 OTOFQ9HC10 1997 aa17.95■□□□□ 0.46
HERPUD1-219ENST00000570273 MYH4Q9Y623 1939 aa17.94■□□□□ 0.46
HERPUD1-219ENST00000570273 PPFIA3O75145 1194 aa17.94■□□□□ 0.46
HERPUD1-219ENST00000570273 CELF2O95319 508 aaKnown RBP17.94■□□□□ 0.46
HERPUD1-219ENST00000570273 PLEKHA8P1O95397 391 aa17.94■□□□□ 0.46
HERPUD1-219ENST00000570273 CTDNEP1O95476 244 aa17.94■□□□□ 0.46
HERPUD1-219ENST00000570273 NDUFB10O96000 172 aa17.94■□□□□ 0.46
HERPUD1-219ENST00000570273 GNAQP50148 359 aa17.94■□□□□ 0.46
HERPUD1-219ENST00000570273 ZYXQ15942 572 aaKnown RBP17.94■□□□□ 0.46
HERPUD1-219ENST00000570273 ASPRV1Q53RT3 343 aa17.94■□□□□ 0.46
HERPUD1-219ENST00000570273 SMC1BQ8NDV3 1235 aa17.94■□□□□ 0.46
HERPUD1-219ENST00000570273 DCAF4Q8WV16 495 aa17.94■□□□□ 0.46
HERPUD1-219ENST00000570273 MAD2L2Q9UI95 211 aa17.94■□□□□ 0.46
HERPUD1-219ENST00000570273 FRMPD2Q68DX3 1309 aaPredicted RBP17.93■□□□□ 0.46
HERPUD1-219ENST00000570273 F5H6K3 240 aa17.93■□□□□ 0.46
HERPUD1-219ENST00000570273 SNHG28P0DPA3 235 aa17.93■□□□□ 0.46
HERPUD1-219ENST00000570273 GJB2P29033 226 aa17.93■□□□□ 0.46
HERPUD1-219ENST00000570273 HMGN5P82970 282 aaKnown RBP17.93■□□□□ 0.46
HERPUD1-219ENST00000570273 KLRC3Q07444 240 aa17.93■□□□□ 0.46
HERPUD1-219ENST00000570273 USP17L2Q6R6M4 530 aa17.93■□□□□ 0.46
HERPUD1-219ENST00000570273 SMARCC2Q8TAQ2 1214 aa17.93■□□□□ 0.46
HERPUD1-219ENST00000570273 DDX11Q96FC9 970 aa17.93■□□□□ 0.46
HERPUD1-219ENST00000570273 WDR18Q9BV38 432 aa17.93■□□□□ 0.46
HERPUD1-219ENST00000570273 VCPKMTQ9H867 229 aa17.93■□□□□ 0.46
HERPUD1-219ENST00000570273 ELP3Q9H9T3 547 aa17.93■□□□□ 0.46
HERPUD1-219ENST00000570273 GBA2Q9HCG7 927 aaPredicted RBP17.93■□□□□ 0.46
HERPUD1-219ENST00000570273 ZHX2Q9Y6X8 837 aa17.93■□□□□ 0.46
HERPUD1-219ENST00000570273 PALM3A6NDB9 673 aaPredicted RBP17.92■□□□□ 0.46
HERPUD1-219ENST00000570273 UBE2Q2LH0YL09 131 aa17.92■□□□□ 0.46
HERPUD1-219ENST00000570273 GOLGA8HP0CJ92 632 aa17.92■□□□□ 0.46
HERPUD1-219ENST00000570273 IFNAR1P17181 557 aa17.92■□□□□ 0.46
HERPUD1-219ENST00000570273 SLC1A4P43007 532 aa17.92■□□□□ 0.46
HERPUD1-219ENST00000570273 FKBP1BP68106 108 aa17.92■□□□□ 0.46
HERPUD1-219ENST00000570273 ZNF543Q08ER8 600 aa17.92■□□□□ 0.46
HERPUD1-219ENST00000570273 NTRK3Q16288 839 aa17.92■□□□□ 0.46
HERPUD1-219ENST00000570273 CMTR1Q8N1G2 835 aaKnown RBP17.92■□□□□ 0.46
HERPUD1-219ENST00000570273 STAG2Q8N3U4 1231 aa17.92■□□□□ 0.46
HERPUD1-219ENST00000570273 ZNF280CQ8ND82 737 aa17.92■□□□□ 0.46
HERPUD1-219ENST00000570273 PHKBQ93100 1093 aa17.92■□□□□ 0.46
HERPUD1-219ENST00000570273 CLMNQ96JQ2 1002 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms