RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 CYP2D7A0A087X1C5 515 aa20.49■□□□□ 0.87
MAP1LC3B-208ENST00000570189 COG2Q14746 738 aa20.49■□□□□ 0.87
MAP1LC3B-208ENST00000570189 PLEKHH3Q7Z736 793 aa20.49■□□□□ 0.87
MAP1LC3B-208ENST00000570189 TICAM2Q86XR7 235 aa20.49■□□□□ 0.87
MAP1LC3B-208ENST00000570189 VCPKMTQ9H867 229 aa20.49■□□□□ 0.87
MAP1LC3B-208ENST00000570189 KANSL2Q9H9L4 492 aa20.49■□□□□ 0.87
MAP1LC3B-208ENST00000570189 HOXC10Q9NYD6 342 aa20.49■□□□□ 0.87
MAP1LC3B-208ENST00000570189 RPTORQ8N122 1335 aa20.49■□□□□ 0.87
MAP1LC3B-208ENST00000570189 SMIM22K7EJ46 135 aa20.48■□□□□ 0.87
MAP1LC3B-208ENST00000570189 GPAA1O43292 621 aa20.48■□□□□ 0.87
MAP1LC3B-208ENST00000570189 PEX10O60683 326 aa20.48■□□□□ 0.87
MAP1LC3B-208ENST00000570189 MB21D1Q8N884 522 aa20.48■□□□□ 0.87
MAP1LC3B-208ENST00000570189 TRIB2Q92519 343 aa20.48■□□□□ 0.87
MAP1LC3B-208ENST00000570189 PAGR1Q9BTK6 254 aa20.48■□□□□ 0.87
MAP1LC3B-208ENST00000570189 STAP2Q9UGK3 403 aa20.48■□□□□ 0.87
MAP1LC3B-208ENST00000570189 COL11A1P12107 1806 aaPredicted RBP20.48■□□□□ 0.87
MAP1LC3B-208ENST00000570189 MYH4Q9Y623 1939 aa20.47■□□□□ 0.87
MAP1LC3B-208ENST00000570189 RGS2P41220 211 aa20.47■□□□□ 0.87
MAP1LC3B-208ENST00000570189 ANKLE1Q8NAG6 615 aa20.47■□□□□ 0.87
MAP1LC3B-208ENST00000570189 OTUD7AQ8TE49 926 aaPredicted RBP20.47■□□□□ 0.87
MAP1LC3B-208ENST00000570189 APBA2Q99767 749 aa20.47■□□□□ 0.87
MAP1LC3B-208ENST00000570189 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.47■□□□□ 0.877e-17■■■■■ 27.9
MAP1LC3B-208ENST00000570189 BTBD7Q9P203 1132 aa20.47■□□□□ 0.87
MAP1LC3B-208ENST00000570189 FRMPD3Q5JV73 1810 aa20.46■□□□□ 0.87
MAP1LC3B-208ENST00000570189 WDR46O15213 610 aaKnown RBP20.46■□□□□ 0.87
MAP1LC3B-208ENST00000570189 HOXC6P09630 235 aa20.46■□□□□ 0.87
MAP1LC3B-208ENST00000570189 KIAA1755Q5JYT7 1200 aa20.46■□□□□ 0.87
MAP1LC3B-208ENST00000570189 ZMYM1Q5SVZ6 1142 aa20.46■□□□□ 0.87
MAP1LC3B-208ENST00000570189 DEFB118Q96PH6 123 aa20.46■□□□□ 0.87
MAP1LC3B-208ENST00000570189 EPB41L4AQ9HCS5 686 aaPredicted RBP20.46■□□□□ 0.87
MAP1LC3B-208ENST00000570189 CEP290O15078 2479 aa20.46■□□□□ 0.87
MAP1LC3B-208ENST00000570189 SLC15A5A6NIM6 579 aa20.45■□□□□ 0.86
MAP1LC3B-208ENST00000570189 PATL2C9JE40 543 aaKnown RBP20.45■□□□□ 0.86
MAP1LC3B-208ENST00000570189 M0R2C6 588 aa20.45■□□□□ 0.86
MAP1LC3B-208ENST00000570189 FARP2O94887 1054 aaPredicted RBP20.45■□□□□ 0.86
MAP1LC3B-208ENST00000570189 CCAR1Q8IX12 1150 aaKnown RBP20.45■□□□□ 0.86
MAP1LC3B-208ENST00000570189 SHCBP1Q8NEM2 672 aa20.45■□□□□ 0.86
MAP1LC3B-208ENST00000570189 HTATIP2Q9BUP3 242 aa20.45■□□□□ 0.86
MAP1LC3B-208ENST00000570189 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.45■□□□□ 0.86
MAP1LC3B-208ENST00000570189 HMX1Q9NP08 348 aaPredicted RBP20.45■□□□□ 0.86
MAP1LC3B-208ENST00000570189 ALPK3Q96L96 1907 aa20.45■□□□□ 0.86
MAP1LC3B-208ENST00000570189 ZNFX1Q9P2E3 1918 aaKnown RBP20.45■□□□□ 0.86
MAP1LC3B-208ENST00000570189 EEF2P13639 858 aaKnown RBP20.44■□□□□ 0.86
MAP1LC3B-208ENST00000570189 CYP2B6P20813 491 aa20.44■□□□□ 0.86
MAP1LC3B-208ENST00000570189 RASA1P20936 1047 aa20.44■□□□□ 0.86
MAP1LC3B-208ENST00000570189 PTPREP23469 700 aa20.44■□□□□ 0.86
MAP1LC3B-208ENST00000570189 DSG3P32926 999 aa20.44■□□□□ 0.86
MAP1LC3B-208ENST00000570189 MAP2K5Q13163 448 aa20.44■□□□□ 0.86
MAP1LC3B-208ENST00000570189 GRB14Q14449 540 aa20.44■□□□□ 0.86
MAP1LC3B-208ENST00000570189 ZNF287Q9HBT7 754 aa20.44■□□□□ 0.86
MAP1LC3B-208ENST00000570189 SYNPO2Q9UMS6 1093 aa20.44■□□□□ 0.86
MAP1LC3B-208ENST00000570189 ADAMTS5Q9UNA0 930 aa20.44■□□□□ 0.86
MAP1LC3B-208ENST00000570189 IGHA2P01877 340 aa20.43■□□□□ 0.86
MAP1LC3B-208ENST00000570189 ZKSCAN1P17029 563 aaPredicted RBP20.43■□□□□ 0.86
MAP1LC3B-208ENST00000570189 CLEC10AQ8IUN9 316 aa20.43■□□□□ 0.86
MAP1LC3B-208ENST00000570189 FSD1Q9BTV5 496 aa20.43■□□□□ 0.86
MAP1LC3B-208ENST00000570189 TANGO6Q9C0B7 1094 aa20.43■□□□□ 0.86
MAP1LC3B-208ENST00000570189 NYAP2Q9P242 653 aa20.43■□□□□ 0.86
MAP1LC3B-208ENST00000570189 ZBTB47Q9UFB7 747 aaPredicted RBP20.43■□□□□ 0.86
MAP1LC3B-208ENST00000570189 PLIN4Q96Q06 1357 aa20.43■□□□□ 0.86
MAP1LC3B-208ENST00000570189 IGKV6D-41A0A0C4DH26 115 aa20.42■□□□□ 0.86
MAP1LC3B-208ENST00000570189 STRNO43815 780 aa20.42■□□□□ 0.86
MAP1LC3B-208ENST00000570189 PRKAR2AP13861 404 aaKnown RBP20.42■□□□□ 0.86
MAP1LC3B-208ENST00000570189 TRIM32Q13049 653 aa20.42■□□□□ 0.86
MAP1LC3B-208ENST00000570189 ANKRD45Q5TZF3 282 aa20.42■□□□□ 0.86
MAP1LC3B-208ENST00000570189 SMC5Q8IY18 1101 aa20.42■□□□□ 0.86
MAP1LC3B-208ENST00000570189 IFNL3Q8IZI9 196 aa20.42■□□□□ 0.86
MAP1LC3B-208ENST00000570189 NACAP1Q9BZK3 213 aa20.42■□□□□ 0.86
MAP1LC3B-208ENST00000570189 SPATC1LQ9H0A9 340 aa20.42■□□□□ 0.86
MAP1LC3B-208ENST00000570189 GOPCQ9HD26 462 aa20.42■□□□□ 0.86
MAP1LC3B-208ENST00000570189 OGDHLQ9ULD0 1010 aa20.42■□□□□ 0.86
MAP1LC3B-208ENST00000570189 IVNS1ABPQ9Y6Y0 642 aa20.42■□□□□ 0.86
MAP1LC3B-208ENST00000570189 TFRCP02786 760 aaKnown RBP20.41■□□□□ 0.86
MAP1LC3B-208ENST00000570189 PDE1AP54750 535 aa20.41■□□□□ 0.86
MAP1LC3B-208ENST00000570189 ABRAQ8N0Z2 381 aa20.41■□□□□ 0.86
MAP1LC3B-208ENST00000570189 EVI5LQ96CN4 794 aa20.41■□□□□ 0.86
MAP1LC3B-208ENST00000570189 MOV10L1Q9BXT6 1211 aaKnown RBP20.41■□□□□ 0.86
MAP1LC3B-208ENST00000570189 FLOT1O75955 427 aa20.4■□□□□ 0.86
MAP1LC3B-208ENST00000570189 TDO2P48775 406 aa20.4■□□□□ 0.86
MAP1LC3B-208ENST00000570189 CACNB2Q08289 660 aaPredicted RBP20.4■□□□□ 0.86
MAP1LC3B-208ENST00000570189 SEC62Q99442 399 aaKnown RBP20.4■□□□□ 0.86
MAP1LC3B-208ENST00000570189 MROH8Q9H579 483 aa20.4■□□□□ 0.86
MAP1LC3B-208ENST00000570189 MKNK2Q9HBH9 465 aa20.4■□□□□ 0.86
MAP1LC3B-208ENST00000570189 MINDY4BA8MYZ0 360 aa20.39■□□□□ 0.85
MAP1LC3B-208ENST00000570189 CCL14Q16627 93 aa20.39■□□□□ 0.85
MAP1LC3B-208ENST00000570189 SPICE1Q8N0Z3 855 aa20.39■□□□□ 0.85
MAP1LC3B-208ENST00000570189 MKL1Q969V6 931 aa20.39■□□□□ 0.85
MAP1LC3B-208ENST00000570189 YTHDC1Q96MU7 727 aaKnown RBP20.39■□□□□ 0.85
MAP1LC3B-208ENST00000570189 CWC22Q9HCG8 908 aaKnown RBP20.39■□□□□ 0.85
MAP1LC3B-208ENST00000570189 PLXNA1Q9UIW2 1896 aa20.39■□□□□ 0.85
MAP1LC3B-208ENST00000570189 FOXP2O15409 715 aa20.38■□□□□ 0.85
MAP1LC3B-208ENST00000570189 APPP05067 770 aa20.38■□□□□ 0.85
MAP1LC3B-208ENST00000570189 MNX1P50219 401 aaPredicted RBP20.38■□□□□ 0.85
MAP1LC3B-208ENST00000570189 OLFML2BQ68BL8 750 aa20.38■□□□□ 0.85
MAP1LC3B-208ENST00000570189 ATG4CQ96DT6 458 aa20.38■□□□□ 0.85
MAP1LC3B-208ENST00000570189 RWDD1Q9H446 243 aaPredicted RBP20.38■□□□□ 0.85
MAP1LC3B-208ENST00000570189 PPP1R9AQ9ULJ8 1098 aa20.38■□□□□ 0.85
MAP1LC3B-208ENST00000570189 H0YGN5 161 aa20.37■□□□□ 0.85
MAP1LC3B-208ENST00000570189 SLC25A27O95847 323 aa20.37■□□□□ 0.85
MAP1LC3B-208ENST00000570189 ERCC3P19447 782 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms