RNA–Protein interactions for RNA: ENST00000570138.5

EDC3-218, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 4

Gene EDC3, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-218ENST00000570138 STAG2Q8N3U4 1231 aa10.61□□□□□ -0.71
EDC3-218ENST00000570138 RNF26Q9BY78 433 aaPredicted RBP10.61□□□□□ -0.71
EDC3-218ENST00000570138 NYAP2Q9P242 653 aa10.61□□□□□ -0.71
EDC3-218ENST00000570138 MAD2L2Q9UI95 211 aa10.61□□□□□ -0.71
EDC3-218ENST00000570138 MTMR7Q9Y216 660 aa10.61□□□□□ -0.71
EDC3-218ENST00000570138 ASTN2O75129 1339 aaPredicted RBP10.6□□□□□ -0.71
EDC3-218ENST00000570138 USP17L5A8MUK1 530 aa10.6□□□□□ -0.71
EDC3-218ENST00000570138 TRAK2O60296 914 aa10.6□□□□□ -0.71
EDC3-218ENST00000570138 DDNO94850 711 aaPredicted RBP10.6□□□□□ -0.71
EDC3-218ENST00000570138 GDF11O95390 407 aa10.6□□□□□ -0.71
EDC3-218ENST00000570138 EPS15P42566 896 aa10.6□□□□□ -0.71
EDC3-218ENST00000570138 ATP2B2Q01814 1243 aa10.6□□□□□ -0.71
EDC3-218ENST00000570138 SEPT2Q15019 361 aa10.6□□□□□ -0.71
EDC3-218ENST00000570138 PKN1Q16512 942 aa10.6□□□□□ -0.71
EDC3-218ENST00000570138 TMEM179Q6ZVK1 233 aa10.6□□□□□ -0.71
EDC3-218ENST00000570138 USP48Q86UV5 1035 aa10.6□□□□□ -0.71
EDC3-218ENST00000570138 CLEC10AQ8IUN9 316 aa10.6□□□□□ -0.71
EDC3-218ENST00000570138 SIAH1Q8IUQ4 282 aa10.6□□□□□ -0.71
EDC3-218ENST00000570138 CDAN1Q8IWY9 1227 aa10.6□□□□□ -0.71
EDC3-218ENST00000570138 TRPM4Q8TD43 1214 aa10.6□□□□□ -0.71
EDC3-218ENST00000570138 MKL1Q969V6 931 aa10.6□□□□□ -0.71
EDC3-218ENST00000570138 LZTS2Q9BRK4 669 aa10.6□□□□□ -0.71
EDC3-218ENST00000570138 KANSL2Q9H9L4 492 aa10.6□□□□□ -0.71
EDC3-218ENST00000570138 CABP5Q9NP86 173 aa10.6□□□□□ -0.71
EDC3-218ENST00000570138 TFIP11Q9UBB9 837 aaKnown RBP10.6□□□□□ -0.71
EDC3-218ENST00000570138 HACL1Q9UJ83 578 aa10.6□□□□□ -0.71
EDC3-218ENST00000570138 SCAF8Q9UPN6 1271 aaKnown RBP10.6□□□□□ -0.71
EDC3-218ENST00000570138 CNPY2Q9Y2B0 182 aa10.6□□□□□ -0.71
EDC3-218ENST00000570138 DDX60LQ5H9U9 1706 aaKnown RBP10.6□□□□□ -0.71
EDC3-218ENST00000570138 PSME4Q14997 1843 aa10.6□□□□□ -0.71
EDC3-218ENST00000570138 LAMB1P07942 1786 aa10.6□□□□□ -0.71
EDC3-218ENST00000570138 ARFGEF1Q9Y6D6 1849 aa10.59□□□□□ -0.71
EDC3-218ENST00000570138 MYH1P12882 1939 aa10.59□□□□□ -0.71
EDC3-218ENST00000570138 hCG_1642624A0A1W2PR95 340 aa10.59□□□□□ -0.71
EDC3-218ENST00000570138 KLRF2D3W0D1 207 aa10.59□□□□□ -0.71
EDC3-218ENST00000570138 GH2P01242 217 aa10.59□□□□□ -0.71
EDC3-218ENST00000570138 PARP1P09874 1014 aaKnown RBP10.59□□□□□ -0.71
EDC3-218ENST00000570138 EEF2P13639 858 aaKnown RBP10.59□□□□□ -0.71
EDC3-218ENST00000570138 HIRAP54198 1017 aaPredicted RBP10.59□□□□□ -0.71
EDC3-218ENST00000570138 TNFAIP1Q13829 316 aa10.59□□□□□ -0.71
EDC3-218ENST00000570138 TRIM29Q14134 588 aa10.59□□□□□ -0.71
EDC3-218ENST00000570138 SLC35G1Q2M3R5 365 aa10.59□□□□□ -0.71
EDC3-218ENST00000570138 SKOR2Q2VWA4 1001 aaPredicted RBP10.59□□□□□ -0.71
EDC3-218ENST00000570138 COL13A1Q5TAT6 717 aaPredicted RBP10.59□□□□□ -0.71
EDC3-218ENST00000570138 USP17L2Q6R6M4 530 aa10.59□□□□□ -0.71
EDC3-218ENST00000570138 MIGA2Q7L4E1 593 aa10.59□□□□□ -0.71
EDC3-218ENST00000570138 LRRC47Q8N1G4 583 aaKnown RBP10.59□□□□□ -0.71
EDC3-218ENST00000570138 TEPSINQ96N21 525 aa10.59□□□□□ -0.71
EDC3-218ENST00000570138 GDPD2Q9HCC8 539 aa10.59□□□□□ -0.71
EDC3-218ENST00000570138 CDK5RAP2Q96SN8 1893 aa10.59□□□□□ -0.71
EDC3-218ENST00000570138 CNTNAP5Q8WYK1 1306 aa10.58□□□□□ -0.71
EDC3-218ENST00000570138 GRIN3BO60391 1043 aa10.58□□□□□ -0.72
EDC3-218ENST00000570138 GOLGA8HP0CJ92 632 aa10.58□□□□□ -0.72
EDC3-218ENST00000570138 SNHG28P0DPA3 235 aa10.58□□□□□ -0.72
EDC3-218ENST00000570138 PDHBP11177 359 aa10.58□□□□□ -0.72
EDC3-218ENST00000570138 PRKCSHP14314 528 aaPredicted RBP10.58□□□□□ -0.72
EDC3-218ENST00000570138 NCLP19338 710 aaKnown RBP10.58□□□□□ -0.72
EDC3-218ENST00000570138 SMARCA1P28370 1054 aa10.58□□□□□ -0.72
EDC3-218ENST00000570138 KIF23Q02241 960 aaPredicted RBP10.58□□□□□ -0.72
EDC3-218ENST00000570138 TMEM87AQ8NBN3 555 aa10.58□□□□□ -0.72
EDC3-218ENST00000570138 PIBF1Q8WXW3 757 aa10.58□□□□□ -0.72
EDC3-218ENST00000570138 DEFB129Q9H1M3 183 aa10.58□□□□□ -0.72
EDC3-218ENST00000570138 KCNJ14Q9UNX9 436 aa10.58□□□□□ -0.72
EDC3-218ENST00000570138 FOCADQ5VW36 1801 aa10.57□□□□□ -0.72
EDC3-218ENST00000570138 KIF28PB7ZC32 967 aa10.57□□□□□ -0.72
EDC3-218ENST00000570138 CYTH3O43739 400 aa10.57□□□□□ -0.72
EDC3-218ENST00000570138 SCG2P13521 617 aa10.57□□□□□ -0.72
EDC3-218ENST00000570138 VEGFAP15692 232 aaPredicted RBP10.57□□□□□ -0.72
EDC3-218ENST00000570138 LMOD1P29536 600 aaPredicted RBP10.57□□□□□ -0.72
EDC3-218ENST00000570138 KRT85P78386 507 aa10.57□□□□□ -0.72
EDC3-218ENST00000570138 ICA1Q05084 483 aa10.57□□□□□ -0.72
EDC3-218ENST00000570138 ZNF543Q08ER8 600 aa10.57□□□□□ -0.72
EDC3-218ENST00000570138 PFKFB3Q16875 520 aaPredicted RBP10.57□□□□□ -0.72
EDC3-218ENST00000570138 ASPRV1Q53RT3 343 aa10.57□□□□□ -0.72
EDC3-218ENST00000570138 ANGEL2Q5VTE6 544 aaKnown RBP10.57□□□□□ -0.72
EDC3-218ENST00000570138 RASGRP2Q7LDG7 609 aa10.57□□□□□ -0.72
EDC3-218ENST00000570138 APOBEC3FQ8IUX4 373 aaKnown RBP10.57□□□□□ -0.72
EDC3-218ENST00000570138 SHISA4Q96DD7 197 aa10.57□□□□□ -0.72
EDC3-218ENST00000570138 ZNF396Q96N95 335 aaPredicted RBP10.57□□□□□ -0.72
EDC3-218ENST00000570138 SPZ1Q9BXG8 430 aa10.57□□□□□ -0.72
EDC3-218ENST00000570138 UBA5Q9GZZ9 404 aa10.57□□□□□ -0.72
EDC3-218ENST00000570138 GPCPD1Q9NPB8 672 aa10.57□□□□□ -0.72
EDC3-218ENST00000570138 RBM27Q9P2N5 1060 aaKnown RBP10.57□□□□□ -0.72
EDC3-218ENST00000570138 FRMPD2Q68DX3 1309 aaPredicted RBP10.57□□□□□ -0.72
EDC3-218ENST00000570138 WDR90Q96KV7 1748 aa10.56□□□□□ -0.72
EDC3-218ENST00000570138 PHF20L1A8MW92 1017 aa10.56□□□□□ -0.72
EDC3-218ENST00000570138 FIBPO43427 364 aa10.56□□□□□ -0.72
EDC3-218ENST00000570138 GADD45BO75293 160 aaPredicted RBP10.56□□□□□ -0.72
EDC3-218ENST00000570138 MMP1P03956 469 aa10.56□□□□□ -0.72
EDC3-218ENST00000570138 XBP1P17861 261 aa10.56□□□□□ -0.72
EDC3-218ENST00000570138 U2AF2P26368 475 aaKnown RBP eCLIP10.56□□□□□ -0.72
EDC3-218ENST00000570138 CAP2P40123 477 aa10.56□□□□□ -0.72
EDC3-218ENST00000570138 SAFBQ15424 915 aaKnown RBP eCLIP10.56□□□□□ -0.72
EDC3-218ENST00000570138 CSPP1Q1MSJ5 1256 aa10.56□□□□□ -0.72
EDC3-218ENST00000570138 NBPF12Q5TAG4 269 aaPredicted RBP10.56□□□□□ -0.72
EDC3-218ENST00000570138 SLFN13Q68D06 897 aa10.56□□□□□ -0.72
EDC3-218ENST00000570138 ATL3Q6DD88 541 aa10.56□□□□□ -0.72
EDC3-218ENST00000570138 DPY19L2Q6NUT2 758 aa10.56□□□□□ -0.72
EDC3-218ENST00000570138 BRAPQ7Z569 592 aa10.56□□□□□ -0.72
EDC3-218ENST00000570138 CPVLQ9H3G5 476 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms