RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 SYCE3A1L190 88 aa6.92□□□□□ -1.3
CYLD-216ENST00000569891 RPS12P25398 132 aaKnown RBP6.92□□□□□ -1.3
CYLD-216ENST00000569891 DIXDC1Q155Q3 683 aa6.92□□□□□ -1.3
CYLD-216ENST00000569891 TXNRD3Q86VQ6 643 aa6.92□□□□□ -1.3
CYLD-216ENST00000569891 DIS3L2Q8IYB7 885 aaKnown RBP6.92□□□□□ -1.3
CYLD-216ENST00000569891 CEP57L1Q8IYX8 460 aa6.92□□□□□ -1.3
CYLD-216ENST00000569891 AGBL3Q8NEM8 1001 aa6.92□□□□□ -1.3
CYLD-216ENST00000569891 TIGD1Q96MW7 591 aa6.92□□□□□ -1.3
CYLD-216ENST00000569891 ZKSCAN3Q9BRR0 538 aa6.92□□□□□ -1.3
CYLD-216ENST00000569891 CLSTN2Q9H4D0 955 aa6.92□□□□□ -1.3
CYLD-216ENST00000569891 TFIP11Q9UBB9 837 aaKnown RBP6.92□□□□□ -1.3
CYLD-216ENST00000569891 COL1A1P02452 1464 aaPredicted RBP6.91□□□□□ -1.3
CYLD-216ENST00000569891 TTLL1O95922 423 aa6.91□□□□□ -1.3
CYLD-216ENST00000569891 EIF6P56537 245 aaKnown RBP6.91□□□□□ -1.3
CYLD-216ENST00000569891 PICALMQ13492 652 aa6.91□□□□□ -1.3
CYLD-216ENST00000569891 STX1AQ16623 288 aa6.91□□□□□ -1.3
CYLD-216ENST00000569891 DOK7Q18PE1 504 aa6.91□□□□□ -1.3
CYLD-216ENST00000569891 PPP1R18Q6NYC8 613 aa6.91□□□□□ -1.3
CYLD-216ENST00000569891 OLFM4Q6UX06 510 aa6.91□□□□□ -1.3
CYLD-216ENST00000569891 AMIGO3Q86WK7 504 aa6.91□□□□□ -1.3
CYLD-216ENST00000569891 CCDC144CPQ8IYA2 1237 aa6.91□□□□□ -1.3
CYLD-216ENST00000569891 KRI1Q8N9T8 703 aaKnown RBP6.91□□□□□ -1.3
CYLD-216ENST00000569891 EHMT1Q9H9B1 1298 aa6.91□□□□□ -1.3
CYLD-216ENST00000569891 HERC5Q9UII4 1024 aaKnown RBP6.91□□□□□ -1.3
CYLD-216ENST00000569891 JAG2Q9Y219 1238 aa6.91□□□□□ -1.3
CYLD-216ENST00000569891 LAD1O00515 517 aa6.91□□□□□ -1.3
CYLD-216ENST00000569891 SMC2O95347 1197 aa6.91□□□□□ -1.3
CYLD-216ENST00000569891 USP17L8P0C7I0 530 aa6.91□□□□□ -1.3
CYLD-216ENST00000569891 HOXA7P31268 230 aaPredicted RBP6.91□□□□□ -1.3
CYLD-216ENST00000569891 GUCY1B3Q02153 619 aa6.91□□□□□ -1.3
CYLD-216ENST00000569891 FKBP1CQ5VVH2 108 aa6.91□□□□□ -1.3
CYLD-216ENST00000569891 KRT25Q7Z3Z0 450 aa6.91□□□□□ -1.3
CYLD-216ENST00000569891 ADGRA1Q86SQ6 560 aa6.91□□□□□ -1.3
CYLD-216ENST00000569891 KANSL2Q9H9L4 492 aa6.91□□□□□ -1.3
CYLD-216ENST00000569891 ARHGEF10LQ9HCE6 1279 aa6.91□□□□□ -1.3
CYLD-216ENST00000569891 SMTNL1A8MU46 457 aa6.91□□□□□ -1.3
CYLD-216ENST00000569891 F8W031 263 aaPredicted RBP6.91□□□□□ -1.3
CYLD-216ENST00000569891 MPHOSPH10O00566 681 aaKnown RBP6.91□□□□□ -1.3
CYLD-216ENST00000569891 CTDNEP1O95476 244 aa6.91□□□□□ -1.3
CYLD-216ENST00000569891 CMA1P23946 247 aa6.91□□□□□ -1.3
CYLD-216ENST00000569891 U2AF2P26368 475 aaKnown RBP eCLIP6.91□□□□□ -1.3
CYLD-216ENST00000569891 SLC39A14Q15043 492 aa6.91□□□□□ -1.3
CYLD-216ENST00000569891 HS1BP3Q53T59 392 aa6.91□□□□□ -1.3
CYLD-216ENST00000569891 SPZ1Q9BXG8 430 aa6.91□□□□□ -1.3
CYLD-216ENST00000569891 OSBPL5Q9H0X9 879 aaPredicted RBP6.91□□□□□ -1.3
CYLD-216ENST00000569891 SAP30BPQ9UHR5 308 aaKnown RBP6.91□□□□□ -1.3
CYLD-216ENST00000569891 CD2APQ9Y5K6 639 aa6.91□□□□□ -1.3
CYLD-216ENST00000569891 STK24Q9Y6E0 443 aa6.91□□□□□ -1.3
CYLD-216ENST00000569891 C10orf71Q711Q0 1435 aa6.91□□□□□ -1.3
CYLD-216ENST00000569891 PRDM1O75626 825 aa6.91□□□□□ -1.3
CYLD-216ENST00000569891 ST3GAL1Q11201 340 aa6.91□□□□□ -1.3
CYLD-216ENST00000569891 RBM26Q5T8P6 1007 aaKnown RBP6.91□□□□□ -1.3
CYLD-216ENST00000569891 NBPF3Q9H094 633 aa6.91□□□□□ -1.3
CYLD-216ENST00000569891 TAOK3Q9H2K8 898 aa6.91□□□□□ -1.3
CYLD-216ENST00000569891 GDPD2Q9HCC8 539 aa6.91□□□□□ -1.3
CYLD-216ENST00000569891 CCDC39Q9UFE4 941 aa6.91□□□□□ -1.3
CYLD-216ENST00000569891 MSNP26038 577 aaKnown RBP6.9□□□□□ -1.3
CYLD-216ENST00000569891 GPT2Q8TD30 523 aa6.9□□□□□ -1.3
CYLD-216ENST00000569891 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.9□□□□□ -1.3
CYLD-216ENST00000569891 IDI2Q9BXS1 227 aa6.9□□□□□ -1.3
CYLD-216ENST00000569891 ZNRF3Q9ULT6 936 aa6.9□□□□□ -1.3
CYLD-216ENST00000569891 V9GY48 417 aaPredicted RBP6.9□□□□□ -1.3
CYLD-216ENST00000569891 COL4A5P29400 1685 aa6.9□□□□□ -1.3
CYLD-216ENST00000569891 PLIN4Q96Q06 1357 aa6.9□□□□□ -1.3
CYLD-216ENST00000569891 CEBPZQ03701 1054 aaKnown RBP6.9□□□□□ -1.3
CYLD-216ENST00000569891 SEMA3FQ13275 785 aa6.9□□□□□ -1.3
CYLD-216ENST00000569891 PFKFB3Q16875 520 aaPredicted RBP6.9□□□□□ -1.3
CYLD-216ENST00000569891 TMEM179Q6ZVK1 233 aa6.9□□□□□ -1.3
CYLD-216ENST00000569891 ZNF579Q8NAF0 562 aaKnown RBP6.9□□□□□ -1.3
CYLD-216ENST00000569891 PHKBQ93100 1093 aa6.9□□□□□ -1.3
CYLD-216ENST00000569891 DBNDD1Q9H9R9 158 aa6.9□□□□□ -1.3
CYLD-216ENST00000569891 DACT1Q9NYF0 836 aa6.9□□□□□ -1.3
CYLD-216ENST00000569891 LOC285556D6RIA3 1793 aa6.9□□□□□ -1.31
CYLD-216ENST00000569891 SYKP43405 635 aa6.9□□□□□ -1.31
CYLD-216ENST00000569891 CCDC96Q2M329 555 aa6.9□□□□□ -1.31
CYLD-216ENST00000569891 FAM47AQ5JRC9 791 aa6.9□□□□□ -1.31
CYLD-216ENST00000569891 RSBN1LQ6PCB5 846 aaPredicted RBP6.9□□□□□ -1.31
CYLD-216ENST00000569891 ELOA2Q8IYF1 753 aaPredicted RBP6.9□□□□□ -1.31
CYLD-216ENST00000569891 LINC00301Q8NCQ3 95 aa6.9□□□□□ -1.31
CYLD-216ENST00000569891 RASSF8Q8NHQ8 419 aa6.9□□□□□ -1.31
CYLD-216ENST00000569891 FAM200AQ8TCP9 573 aa6.9□□□□□ -1.31
CYLD-216ENST00000569891 DCAF4Q8WV16 495 aa6.9□□□□□ -1.31
CYLD-216ENST00000569891 LRRC27Q9C0I9 530 aa6.9□□□□□ -1.31
CYLD-216ENST00000569891 COL2A1P02458 1487 aaPredicted RBP6.9□□□□□ -1.31
CYLD-216ENST00000569891 MRPL12P52815 198 aaKnown RBP6.89□□□□□ -1.31
CYLD-216ENST00000569891 TROAPQ12815 778 aa6.89□□□□□ -1.31
CYLD-216ENST00000569891 CIAPIN1Q6FI81 312 aa6.89□□□□□ -1.31
CYLD-216ENST00000569891 USP28Q96RU2 1077 aa6.89□□□□□ -1.31
CYLD-216ENST00000569891 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.89□□□□□ -1.31
CYLD-216ENST00000569891 ZNF219Q9P2Y4 722 aaPredicted RBP6.89□□□□□ -1.31
CYLD-216ENST00000569891 MARCH6O60337 910 aa6.89□□□□□ -1.31
CYLD-216ENST00000569891 RASA1P20936 1047 aa6.89□□□□□ -1.31
CYLD-216ENST00000569891 NTRK3Q16288 839 aa6.89□□□□□ -1.31
CYLD-216ENST00000569891 TMEM266Q2M3C6 531 aa6.89□□□□□ -1.31
CYLD-216ENST00000569891 CERKLQ49MI3 558 aaPredicted RBP6.89□□□□□ -1.31
CYLD-216ENST00000569891 KIAA0825Q8IV33 1275 aa6.89□□□□□ -1.31
CYLD-216ENST00000569891 TMEM63CQ9P1W3 806 aa6.89□□□□□ -1.31
CYLD-216ENST00000569891 C21orf2O43822 256 aa6.89□□□□□ -1.31
CYLD-216ENST00000569891 FDPSP14324 419 aaKnown RBP6.89□□□□□ -1.31
CYLD-216ENST00000569891 RXRAP19793 462 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms