RNA–Protein interactions for RNA: ENST00000569711.1

LINC01654-201, Transcript of long intergenic non-protein coding RNA 1654, humanhuman

TSL 1 (best) BASIC

Gene LINC01654, Length 2,471 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01654-201ENST00000569711 TXLNAP40222 546 aa12.14□□□□□ -0.47
LINC01654-201ENST00000569711 BRD3Q15059 726 aa12.14□□□□□ -0.47
LINC01654-201ENST00000569711 CCDC178Q5BJE1 867 aa12.14□□□□□ -0.47
LINC01654-201ENST00000569711 TRMT44Q8IYL2 757 aaKnown RBP12.14□□□□□ -0.47
LINC01654-201ENST00000569711 MED15Q96RN5 788 aa12.14□□□□□ -0.47
LINC01654-201ENST00000569711 ABCF2Q9UG63 623 aa12.14□□□□□ -0.47
LINC01654-201ENST00000569711 TAOK2Q9UL54 1235 aa12.14□□□□□ -0.47
LINC01654-201ENST00000569711 ADGRG1Q9Y653 693 aa12.14□□□□□ -0.47
LINC01654-201ENST00000569711 V9GY48 417 aaPredicted RBP12.14□□□□□ -0.47
LINC01654-201ENST00000569711 STRCQ7RTU9 1775 aa12.14□□□□□ -0.47
LINC01654-201ENST00000569711 ZNF831Q5JPB2 1677 aa12.14□□□□□ -0.47
LINC01654-201ENST00000569711 CACNA1SQ13698 1873 aa12.14□□□□□ -0.47
LINC01654-201ENST00000569711 NPHP1O15259 732 aa12.14□□□□□ -0.47
LINC01654-201ENST00000569711 LONP1P36776 959 aaKnown RBP12.14□□□□□ -0.47
LINC01654-201ENST00000569711 ZNF827Q17R98 1081 aa12.14□□□□□ -0.47
LINC01654-201ENST00000569711 GRAMD1CQ8IYS0 662 aa12.14□□□□□ -0.47
LINC01654-201ENST00000569711 MSL3Q8N5Y2 521 aaKnown RBP12.14□□□□□ -0.47
LINC01654-201ENST00000569711 SDR42E1Q8WUS8 393 aa12.14□□□□□ -0.47
LINC01654-201ENST00000569711 SMARCC1Q92922 1105 aaPredicted RBP12.14□□□□□ -0.47
LINC01654-201ENST00000569711 WDR24Q96S15 920 aa12.14□□□□□ -0.47
LINC01654-201ENST00000569711 ARFGAP3Q9NP61 516 aa12.14□□□□□ -0.47
LINC01654-201ENST00000569711 ARPP21Q9UBL0 812 aaPredicted RBP12.14□□□□□ -0.47
LINC01654-201ENST00000569711 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.14□□□□□ -0.47
LINC01654-201ENST00000569711 CCDC151A5D8V7 595 aa12.13□□□□□ -0.47
LINC01654-201ENST00000569711 FANCGO15287 622 aa12.13□□□□□ -0.47
LINC01654-201ENST00000569711 ATP2B1P20020 1258 aa12.13□□□□□ -0.47
LINC01654-201ENST00000569711 HSPA2P54652 639 aa12.13□□□□□ -0.47
LINC01654-201ENST00000569711 SBK1Q52WX2 424 aa12.13□□□□□ -0.47
LINC01654-201ENST00000569711 ADGRA1Q86SQ6 560 aa12.13□□□□□ -0.47
LINC01654-201ENST00000569711 CMTR1Q8N1G2 835 aaKnown RBP12.13□□□□□ -0.47
LINC01654-201ENST00000569711 LRRN4CLQ8ND94 238 aa12.13□□□□□ -0.47
LINC01654-201ENST00000569711 CCDC12Q8WUD4 166 aaPredicted RBP12.13□□□□□ -0.47
LINC01654-201ENST00000569711 EPSTI1Q96J88 318 aa12.13□□□□□ -0.47
LINC01654-201ENST00000569711 CRNKL1Q9BZJ0 848 aaKnown RBP12.13□□□□□ -0.47
LINC01654-201ENST00000569711 CNTNAP5Q8WYK1 1306 aa12.13□□□□□ -0.47
LINC01654-201ENST00000569711 A0A1B0GUL6 1792 aa12.13□□□□□ -0.47
LINC01654-201ENST00000569711 SCN7AQ01118 1682 aa12.13□□□□□ -0.47
LINC01654-201ENST00000569711 LOC102724428A0A0B4J2F2 783 aa12.13□□□□□ -0.47
LINC01654-201ENST00000569711 SCG2P13521 617 aa12.13□□□□□ -0.47
LINC01654-201ENST00000569711 SIK1P57059 783 aa12.13□□□□□ -0.47
LINC01654-201ENST00000569711 RBL2Q08999 1139 aa12.13□□□□□ -0.47
LINC01654-201ENST00000569711 E2F4Q16254 413 aa12.13□□□□□ -0.47
LINC01654-201ENST00000569711 PFKFB3Q16875 520 aaPredicted RBP12.13□□□□□ -0.47
LINC01654-201ENST00000569711 GALNT17Q6IS24 598 aa12.13□□□□□ -0.47
LINC01654-201ENST00000569711 USP49Q70CQ1 688 aa12.13□□□□□ -0.47
LINC01654-201ENST00000569711 SRGAP1Q7Z6B7 1085 aa12.13□□□□□ -0.47
LINC01654-201ENST00000569711 HNRNPLLQ8WVV9 542 aaKnown RBP12.13□□□□□ -0.47
LINC01654-201ENST00000569711 A0A087X0B3 334 aa12.12□□□□□ -0.47
LINC01654-201ENST00000569711 AFMP43652 599 aa12.12□□□□□ -0.47
LINC01654-201ENST00000569711 GOLGA8FQ08AF8 430 aa12.12□□□□□ -0.47
LINC01654-201ENST00000569711 GOLGA8DPQ0D2H9 430 aa12.12□□□□□ -0.47
LINC01654-201ENST00000569711 PTGDRQ13258 359 aa12.12□□□□□ -0.47
LINC01654-201ENST00000569711 ZNF658Q5TYW1 1059 aaPredicted RBP12.12□□□□□ -0.47
LINC01654-201ENST00000569711 CC2D1AQ6P1N0 951 aaPredicted RBP12.12□□□□□ -0.47
LINC01654-201ENST00000569711 CTR9Q6PD62 1173 aa12.12□□□□□ -0.47
LINC01654-201ENST00000569711 UBXN6Q9BZV1 441 aa12.12□□□□□ -0.47
LINC01654-201ENST00000569711 SNAP23O00161 211 aa12.12□□□□□ -0.47
LINC01654-201ENST00000569711 PLEKHA8P1O95397 391 aa12.12□□□□□ -0.47
LINC01654-201ENST00000569711 PAK1Q13153 545 aa12.12□□□□□ -0.47
LINC01654-201ENST00000569711 NPY5RQ15761 445 aa12.12□□□□□ -0.47
LINC01654-201ENST00000569711 CYP26C1Q6V0L0 522 aa12.12□□□□□ -0.47
LINC01654-201ENST00000569711 SHISA4Q96DD7 197 aa12.12□□□□□ -0.47
LINC01654-201ENST00000569711 CDC23Q9UJX2 597 aa12.12□□□□□ -0.47
LINC01654-201ENST00000569711 LAMB1P07942 1786 aa12.12□□□□□ -0.47
LINC01654-201ENST00000569711 MAST2Q6P0Q8 1798 aa12.12□□□□□ -0.47
LINC01654-201ENST00000569711 H7C1D1 291 aa12.11□□□□□ -0.47
LINC01654-201ENST00000569711 LAD1O00515 517 aa12.11□□□□□ -0.47
LINC01654-201ENST00000569711 CD44P16070 742 aaKnown RBP12.11□□□□□ -0.47
LINC01654-201ENST00000569711 PLA2G4AP47712 749 aa12.11□□□□□ -0.47
LINC01654-201ENST00000569711 GNAQP50148 359 aa12.11□□□□□ -0.47
LINC01654-201ENST00000569711 NLRP5P59047 1200 aa12.11□□□□□ -0.47
LINC01654-201ENST00000569711 PIP4K2BP78356 416 aa12.11□□□□□ -0.47
LINC01654-201ENST00000569711 HSP90AA4PQ58FG1 418 aa12.11□□□□□ -0.47
LINC01654-201ENST00000569711 SLC10A5Q5PT55 438 aa12.11□□□□□ -0.47
LINC01654-201ENST00000569711 PDXDC2PQ6P474 469 aa12.11□□□□□ -0.47
LINC01654-201ENST00000569711 FBXO33Q7Z6M2 555 aa12.11□□□□□ -0.47
LINC01654-201ENST00000569711 ZNF335Q9H4Z2 1342 aaPredicted RBP12.11□□□□□ -0.47
LINC01654-201ENST00000569711 MYH2Q9UKX2 1941 aa12.11□□□□□ -0.47
LINC01654-201ENST00000569711 CTAGE9A4FU28 777 aa12.11□□□□□ -0.47
LINC01654-201ENST00000569711 TEX33O43247 280 aa12.11□□□□□ -0.47
LINC01654-201ENST00000569711 CHMP4BP1P59074 171 aa12.11□□□□□ -0.47
LINC01654-201ENST00000569711 GPS2Q13227 327 aa12.11□□□□□ -0.47
LINC01654-201ENST00000569711 ZNF174Q15697 407 aa12.11□□□□□ -0.47
LINC01654-201ENST00000569711 DDB1Q16531 1140 aa12.11□□□□□ -0.47
LINC01654-201ENST00000569711 KLHL10Q6JEL2 608 aa12.11□□□□□ -0.47
LINC01654-201ENST00000569711 NOC3LQ8WTT2 800 aaKnown RBP12.11□□□□□ -0.47
LINC01654-201ENST00000569711 ANKRD2Q9GZV1 360 aa12.11□□□□□ -0.47
LINC01654-201ENST00000569711 MAGEF1Q9HAY2 307 aa12.11□□□□□ -0.47
LINC01654-201ENST00000569711 COL1A1P02452 1464 aaPredicted RBP12.1□□□□□ -0.47
LINC01654-201ENST00000569711 COL16A1Q07092 1604 aaPredicted RBP12.1□□□□□ -0.47
LINC01654-201ENST00000569711 SOWAHDA6NJG2 315 aa12.1□□□□□ -0.47
LINC01654-201ENST00000569711 ERLIN1O75477 346 aa12.1□□□□□ -0.47
LINC01654-201ENST00000569711 PPP1R2P41236 205 aa12.1□□□□□ -0.47
LINC01654-201ENST00000569711 GYG1P46976 350 aa12.1□□□□□ -0.47
LINC01654-201ENST00000569711 KCNB1Q14721 858 aa12.1□□□□□ -0.47
LINC01654-201ENST00000569711 WHAMMP3Q1A5X7 153 aa12.1□□□□□ -0.47
LINC01654-201ENST00000569711 EARS2Q5JPH6 523 aaKnown RBP12.1□□□□□ -0.47
LINC01654-201ENST00000569711 ANKS1AQ92625 1134 aa12.1□□□□□ -0.47
LINC01654-201ENST00000569711 NSUN4Q96CB9 384 aaKnown RBP12.1□□□□□ -0.47
LINC01654-201ENST00000569711 FAM84BQ96KN1 310 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms