RNA–Protein interactions for RNA: ENST00000569374.1

CCDC113-205, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-205ENST00000569374 SMNDC1O75940 238 aaKnown RBP eCLIP10.22□□□□□ -0.77
CCDC113-205ENST00000569374 RPS26P62854 115 aaKnown RBP10.22□□□□□ -0.77
CCDC113-205ENST00000569374 MAP3K10Q02779 954 aa10.22□□□□□ -0.77
CCDC113-205ENST00000569374 CCDC144BQ3MJ40 725 aa10.22□□□□□ -0.77
CCDC113-205ENST00000569374 SNAP47Q5SQN1 464 aa10.22□□□□□ -0.77
CCDC113-205ENST00000569374 IFNL2Q8IZJ0 200 aa10.22□□□□□ -0.77
CCDC113-205ENST00000569374 PHC3Q8NDX5 983 aa10.22□□□□□ -0.77
CCDC113-205ENST00000569374 TRIM56Q9BRZ2 755 aaKnown RBP10.22□□□□□ -0.77
CCDC113-205ENST00000569374 KCNQ5Q9NR82 932 aa10.22□□□□□ -0.77
CCDC113-205ENST00000569374 TMOD3Q9NYL9 352 aa10.22□□□□□ -0.77
CCDC113-205ENST00000569374 TMA7Q9Y2S6 64 aaKnown RBP10.22□□□□□ -0.77
CCDC113-205ENST00000569374 MAP3K5Q99683 1374 aa10.22□□□□□ -0.77
CCDC113-205ENST00000569374 FAM177BA6PVY3 158 aa10.21□□□□□ -0.77
CCDC113-205ENST00000569374 ST8SIA5O15466 376 aa10.21□□□□□ -0.77
CCDC113-205ENST00000569374 ACPPP15309 386 aa10.21□□□□□ -0.77
CCDC113-205ENST00000569374 NFX1Q12986 1120 aaKnown RBP10.21□□□□□ -0.77
CCDC113-205ENST00000569374 GRIN2CQ14957 1233 aa10.21□□□□□ -0.77
CCDC113-205ENST00000569374 TTBK2Q6IQ55 1244 aa10.21□□□□□ -0.77
CCDC113-205ENST00000569374 MICALL1Q8N3F8 863 aa10.21□□□□□ -0.77
CCDC113-205ENST00000569374 RHOVQ96L33 236 aa10.21□□□□□ -0.77
CCDC113-205ENST00000569374 NECAB3Q96P71 396 aaPredicted RBP10.21□□□□□ -0.77
CCDC113-205ENST00000569374 UBE2OQ9C0C9 1292 aaKnown RBP10.21□□□□□ -0.77
CCDC113-205ENST00000569374 GPN3Q9UHW5 284 aaPredicted RBP10.21□□□□□ -0.77
CCDC113-205ENST00000569374 NFKBIEO00221 500 aa10.2□□□□□ -0.78
CCDC113-205ENST00000569374 YBX3P16989 372 aaKnown RBP eCLIP10.2□□□□□ -0.78
CCDC113-205ENST00000569374 SCN7AQ01118 1682 aa10.2□□□□□ -0.78
CCDC113-205ENST00000569374 LMNB2Q03252 620 aa10.2□□□□□ -0.78
CCDC113-205ENST00000569374 SPRED3Q2MJR0 410 aa10.2□□□□□ -0.78
CCDC113-205ENST00000569374 ZNF576Q9H609 170 aa10.2□□□□□ -0.78
CCDC113-205ENST00000569374 IGFLR1Q9H665 355 aa10.2□□□□□ -0.78
CCDC113-205ENST00000569374 LGR6Q9HBX8 967 aa10.2□□□□□ -0.78
CCDC113-205ENST00000569374 SEC31BQ9NQW1 1179 aa10.2□□□□□ -0.78
CCDC113-205ENST00000569374 TMEM39AQ9NV64 488 aa10.2□□□□□ -0.78
CCDC113-205ENST00000569374 F6X3S4 739 aa10.19□□□□□ -0.78
CCDC113-205ENST00000569374 CELA3AP09093 270 aa10.19□□□□□ -0.78
CCDC113-205ENST00000569374 YY1P25490 414 aa10.19□□□□□ -0.78
CCDC113-205ENST00000569374 NASPP49321 788 aaPredicted RBP10.19□□□□□ -0.78
CCDC113-205ENST00000569374 CAMK2GQ13555 558 aaPredicted RBP10.19□□□□□ -0.78
CCDC113-205ENST00000569374 AGMOQ6ZNB7 445 aa10.19□□□□□ -0.78
CCDC113-205ENST00000569374 BSNDQ8WZ55 320 aa10.19□□□□□ -0.78
CCDC113-205ENST00000569374 TRIM47Q96LD4 638 aa10.19□□□□□ -0.78
CCDC113-205ENST00000569374 OSBPL2Q9H1P3 480 aa10.19□□□□□ -0.78
CCDC113-205ENST00000569374 RASSF4Q9H2L5 321 aa10.19□□□□□ -0.78
CCDC113-205ENST00000569374 ZSWIM4Q9H7M6 989 aa10.19□□□□□ -0.78
CCDC113-205ENST00000569374 DNAJB12Q9NXW2 375 aaKnown RBP10.19□□□□□ -0.78
CCDC113-205ENST00000569374 EFR3BQ9Y2G0 817 aa10.19□□□□□ -0.78
CCDC113-205ENST00000569374 CACNA1SQ13698 1873 aa10.19□□□□□ -0.78
CCDC113-205ENST00000569374 COL11A2P13942 1736 aaPredicted RBP10.19□□□□□ -0.78
CCDC113-205ENST00000569374 METTL12A8MUP2 240 aa10.18□□□□□ -0.78
CCDC113-205ENST00000569374 ENC1O14682 589 aa10.18□□□□□ -0.78
CCDC113-205ENST00000569374 SIN3BO75182 1162 aa10.18□□□□□ -0.78
CCDC113-205ENST00000569374 TRPA1O75762 1119 aa10.18□□□□□ -0.78
CCDC113-205ENST00000569374 PF4P02776 101 aa10.18□□□□□ -0.78
CCDC113-205ENST00000569374 EIF2AK2P19525 551 aaKnown RBP10.18□□□□□ -0.78
CCDC113-205ENST00000569374 TBC1D8BQ0IIM8 1120 aa10.18□□□□□ -0.78
CCDC113-205ENST00000569374 APOBRQ0VD83 1088 aa10.18□□□□□ -0.78
CCDC113-205ENST00000569374 SLC39A6Q13433 755 aa10.18□□□□□ -0.78
CCDC113-205ENST00000569374 NFE2L2Q16236 605 aa10.18□□□□□ -0.78
CCDC113-205ENST00000569374 MTHFSDQ2M296 383 aaKnown RBP10.18□□□□□ -0.78
CCDC113-205ENST00000569374 ZNF468Q5VIY5 522 aaPredicted RBP10.18□□□□□ -0.78
CCDC113-205ENST00000569374 FBXL19Q6PCT2 694 aa10.18□□□□□ -0.78
CCDC113-205ENST00000569374 SYT9Q86SS6 491 aa10.18□□□□□ -0.78
CCDC113-205ENST00000569374 CCDC84Q86UT8 332 aaPredicted RBP10.18□□□□□ -0.78
CCDC113-205ENST00000569374 GOLM1Q8NBJ4 401 aa10.18□□□□□ -0.78
CCDC113-205ENST00000569374 CPLX3Q8WVH0 158 aa10.18□□□□□ -0.78
CCDC113-205ENST00000569374 EAF1Q96JC9 268 aaPredicted RBP10.18□□□□□ -0.78
CCDC113-205ENST00000569374 CLEC4MQ9H2X3 399 aaPredicted RBP10.18□□□□□ -0.78
CCDC113-205ENST00000569374 AVENQ9NQS1 362 aaPredicted RBP10.18□□□□□ -0.78
CCDC113-205ENST00000569374 HCN2Q9UL51 889 aa10.18□□□□□ -0.78
CCDC113-205ENST00000569374 ANKRD31Q8N7Z5 1873 aa10.18□□□□□ -0.78
CCDC113-205ENST00000569374 BCORQ6W2J9 1755 aa10.18□□□□□ -0.78
CCDC113-205ENST00000569374 PLEKHG2Q9H7P9 1386 aa10.17□□□□□ -0.78
CCDC113-205ENST00000569374 NPC1L1Q9UHC9 1359 aa10.17□□□□□ -0.78
CCDC113-205ENST00000569374 J3QW42 95 aa10.17□□□□□ -0.78
CCDC113-205ENST00000569374 SOX9P48436 509 aa10.17□□□□□ -0.78
CCDC113-205ENST00000569374 MLLT1Q03111 559 aaPredicted RBP10.17□□□□□ -0.78
CCDC113-205ENST00000569374 PLEKHO1Q53GL0 409 aaPredicted RBP10.17□□□□□ -0.78
CCDC113-205ENST00000569374 GIMAP6Q6P9H5 292 aa10.17□□□□□ -0.78
CCDC113-205ENST00000569374 HFE2Q6ZVN8 426 aa10.17□□□□□ -0.78
CCDC113-205ENST00000569374 DCAF5Q96JK2 942 aa10.17□□□□□ -0.78
CCDC113-205ENST00000569374 TLR6Q9Y2C9 796 aa10.17□□□□□ -0.78
CCDC113-205ENST00000569374 PXDNLA1KZ92 1463 aa10.17□□□□□ -0.78
CCDC113-205ENST00000569374 KDM3BQ7LBC6 1761 aa10.16□□□□□ -0.78
CCDC113-205ENST00000569374 DLEC1Q9Y238 1755 aa10.16□□□□□ -0.78
CCDC113-205ENST00000569374 CDC14CA4D256 554 aa10.16□□□□□ -0.78
CCDC113-205ENST00000569374 ZBTB42B2RXF5 422 aa10.16□□□□□ -0.78
CCDC113-205ENST00000569374 GREM1O60565 184 aa10.16□□□□□ -0.78
CCDC113-205ENST00000569374 BMP4P12644 408 aa10.16□□□□□ -0.78
CCDC113-205ENST00000569374 NCLP19338 710 aaKnown RBP10.16□□□□□ -0.78
CCDC113-205ENST00000569374 ATP11AP98196 1134 aa10.16□□□□□ -0.78
CCDC113-205ENST00000569374 FAM160A1Q05DH4 1040 aa10.16□□□□□ -0.78
CCDC113-205ENST00000569374 PCNX4Q63HM2 1172 aa10.16□□□□□ -0.78
CCDC113-205ENST00000569374 CEP135Q66GS9 1140 aa10.16□□□□□ -0.78
CCDC113-205ENST00000569374 TRIM42Q8IWZ5 723 aa10.16□□□□□ -0.78
CCDC113-205ENST00000569374 SLC16A10Q8TF71 515 aa10.16□□□□□ -0.78
CCDC113-205ENST00000569374 SMARCC1Q92922 1105 aaPredicted RBP10.16□□□□□ -0.78
CCDC113-205ENST00000569374 HHIPQ96QV1 700 aa10.16□□□□□ -0.78
CCDC113-205ENST00000569374 MIR1-1HGQ9H1L0 117 aa10.16□□□□□ -0.78
CCDC113-205ENST00000569374 PRKRIP1Q9H875 184 aaPredicted RBP10.16□□□□□ -0.78
CCDC113-205ENST00000569374 GINM1Q9NU53 330 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms