RNA–Protein interactions for RNA: ENST00000569357.4

TCF4-243, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-243ENST00000569357 USP17L2Q6R6M4 530 aa11.24□□□□□ -0.61
TCF4-243ENST00000569357 ATG9AQ7Z3C6 839 aa11.24□□□□□ -0.61
TCF4-243ENST00000569357 TEX11Q8IYF3 940 aa11.24□□□□□ -0.61
TCF4-243ENST00000569357 SLC44A5Q8NCS7 719 aa11.24□□□□□ -0.61
TCF4-243ENST00000569357 PI4KBQ9UBF8 816 aa11.24□□□□□ -0.61
TCF4-243ENST00000569357 MSRAQ9UJ68 235 aa11.24□□□□□ -0.61
TCF4-243ENST00000569357 MYH2Q9UKX2 1941 aa11.24□□□□□ -0.61
TCF4-243ENST00000569357 IL16Q14005 1332 aa11.24□□□□□ -0.61
TCF4-243ENST00000569357 MUC3AQ02505 3323 aa11.23□□□□□ -0.61
TCF4-243ENST00000569357 CDH23Q9H251 3354 aa11.23□□□□□ -0.61
TCF4-243ENST00000569357 FAM86C2PA6NEL3 165 aa11.23□□□□□ -0.61
TCF4-243ENST00000569357 USP17L15C9J2P7 530 aa11.23□□□□□ -0.61
TCF4-243ENST00000569357 USP17L13C9JLJ4 530 aa11.23□□□□□ -0.61
TCF4-243ENST00000569357 USP17L11C9JVI0 530 aa11.23□□□□□ -0.61
TCF4-243ENST00000569357 USP17L18D6R9N7 530 aa11.23□□□□□ -0.61
TCF4-243ENST00000569357 USP17L22D6RA61 530 aa11.23□□□□□ -0.61
TCF4-243ENST00000569357 USP17L17D6RBQ6 530 aa11.23□□□□□ -0.61
TCF4-243ENST00000569357 USP17L19D6RCP7 530 aa11.23□□□□□ -0.61
TCF4-243ENST00000569357 USP17L20D6RJB6 530 aa11.23□□□□□ -0.61
TCF4-243ENST00000569357 APBB1O00213 710 aa11.23□□□□□ -0.61
TCF4-243ENST00000569357 LDHCP07864 332 aa11.23□□□□□ -0.61
TCF4-243ENST00000569357 USP17L24Q0WX57 530 aa11.23□□□□□ -0.61
TCF4-243ENST00000569357 SNX27Q96L92 541 aa11.23□□□□□ -0.61
TCF4-243ENST00000569357 RAI14Q9P0K7 980 aa11.23□□□□□ -0.61
TCF4-243ENST00000569357 CXXC1Q9P0U4 656 aaPredicted RBP11.23□□□□□ -0.61
TCF4-243ENST00000569357 BTBD7Q9P203 1132 aa11.23□□□□□ -0.61
TCF4-243ENST00000569357 ZBTB21Q9ULJ3 1066 aa11.23□□□□□ -0.61
TCF4-243ENST00000569357 DCDC2CA8MYV0 355 aa11.22□□□□□ -0.61
TCF4-243ENST00000569357 ACRP10323 421 aa11.22□□□□□ -0.61
TCF4-243ENST00000569357 HOXB3P14651 431 aaPredicted RBP11.22□□□□□ -0.61
TCF4-243ENST00000569357 ADORA2AP29274 412 aa11.22□□□□□ -0.61
TCF4-243ENST00000569357 RFX5P48382 616 aaPredicted RBP11.22□□□□□ -0.61
TCF4-243ENST00000569357 GSTO1P78417 241 aa11.22□□□□□ -0.61
TCF4-243ENST00000569357 RLFQ13129 1914 aa11.22□□□□□ -0.61
TCF4-243ENST00000569357 CCDC174Q6PII3 467 aa11.22□□□□□ -0.61
TCF4-243ENST00000569357 NOL10Q9BSC4 688 aaKnown RBP11.22□□□□□ -0.61
TCF4-243ENST00000569357 NKX2-4Q9H2Z4 354 aa11.22□□□□□ -0.61
TCF4-243ENST00000569357 SLC28A3Q9HAS3 691 aa11.22□□□□□ -0.61
TCF4-243ENST00000569357 PHF24Q9UPV7 400 aa11.22□□□□□ -0.61
TCF4-243ENST00000569357 TCF20Q9UGU0 1960 aaKnown RBP11.21□□□□□ -0.61
TCF4-243ENST00000569357 ATAD5Q96QE3 1844 aa11.21□□□□□ -0.61
TCF4-243ENST00000569357 A0A1W2PQ45 241 aaPredicted RBP11.21□□□□□ -0.61
TCF4-243ENST00000569357 A0A1W2PQY0 241 aa11.21□□□□□ -0.61
TCF4-243ENST00000569357 PGK1P00558 417 aa11.21□□□□□ -0.61
TCF4-243ENST00000569357 RARBP10826 455 aa11.21□□□□□ -0.61
TCF4-243ENST00000569357 FAAP100Q0VG06 881 aa11.21□□□□□ -0.61
TCF4-243ENST00000569357 RAB30Q15771 203 aa11.21□□□□□ -0.61
TCF4-243ENST00000569357 OLFML2BQ68BL8 750 aa11.21□□□□□ -0.61
TCF4-243ENST00000569357 TBC1D9Q6ZT07 1266 aa11.21□□□□□ -0.61
TCF4-243ENST00000569357 RNF180Q86T96 592 aa11.21□□□□□ -0.61
TCF4-243ENST00000569357 SH3RF3Q8TEJ3 882 aaPredicted RBP11.21□□□□□ -0.61
TCF4-243ENST00000569357 DHX36Q9H2U1 1008 aaKnown RBP11.21□□□□□ -0.61
TCF4-243ENST00000569357 XPNPEP3Q9NQH7 507 aa11.21□□□□□ -0.61
TCF4-243ENST00000569357 MAP4K4O95819 1239 aaPredicted RBP11.2□□□□□ -0.62
TCF4-243ENST00000569357 TIMP1P01033 207 aa11.2□□□□□ -0.62
TCF4-243ENST00000569357 GH2P01242 217 aa11.2□□□□□ -0.62
TCF4-243ENST00000569357 TIMM10P62072 90 aa11.2□□□□□ -0.62
TCF4-243ENST00000569357 PPIGQ13427 754 aaKnown RBP eCLIP11.2□□□□□ -0.62
TCF4-243ENST00000569357 TMEM240Q5SV17 173 aa11.2□□□□□ -0.62
TCF4-243ENST00000569357 CATSPERGQ6ZRH7 1159 aa11.2□□□□□ -0.62
TCF4-243ENST00000569357 FOXP4Q8IVH2 680 aaPredicted RBP11.2□□□□□ -0.62
TCF4-243ENST00000569357 MAPKAPK5Q8IW41 473 aa11.2□□□□□ -0.62
TCF4-243ENST00000569357 ZNF384Q8TF68 577 aa11.2□□□□□ -0.62
TCF4-243ENST00000569357 TGFBRAP1Q8WUH2 860 aa11.2□□□□□ -0.62
TCF4-243ENST00000569357 USP44Q9H0E7 712 aa11.2□□□□□ -0.62
TCF4-243ENST00000569357 DNAJC18Q9H819 358 aa11.2□□□□□ -0.62
TCF4-243ENST00000569357 STARD7Q9NQZ5 370 aa11.2□□□□□ -0.62
TCF4-243ENST00000569357 SLC5A4Q9NY91 659 aa11.2□□□□□ -0.62
TCF4-243ENST00000569357 PALD1Q9ULE6 856 aa11.2□□□□□ -0.62
TCF4-243ENST00000569357 STRNO43815 780 aa11.19□□□□□ -0.62
TCF4-243ENST00000569357 COBLO75128 1261 aa11.19□□□□□ -0.62
TCF4-243ENST00000569357 CSF2RAP15509 400 aa11.19□□□□□ -0.62
TCF4-243ENST00000569357 MRE11P49959 708 aa11.19□□□□□ -0.62
TCF4-243ENST00000569357 PLS1Q14651 629 aa11.19□□□□□ -0.62
TCF4-243ENST00000569357 RAB3GAP1Q15042 981 aa11.19□□□□□ -0.62
TCF4-243ENST00000569357 MFSD5Q6N075 450 aa11.19□□□□□ -0.62
TCF4-243ENST00000569357 ZNF365Q70YC5 407 aa11.19□□□□□ -0.62
TCF4-243ENST00000569357 C16orf59Q7L2K0 433 aa11.19□□□□□ -0.62
TCF4-243ENST00000569357 NSUN4Q96CB9 384 aaKnown RBP11.19□□□□□ -0.62
TCF4-243ENST00000569357 MOV10L1Q9BXT6 1211 aaKnown RBP11.19□□□□□ -0.62
TCF4-243ENST00000569357 PPP1R12CQ9BZL4 782 aa11.19□□□□□ -0.62
TCF4-243ENST00000569357 PRKRIP1Q9H875 184 aaPredicted RBP11.19□□□□□ -0.62
TCF4-243ENST00000569357 GINM1Q9NU53 330 aa11.19□□□□□ -0.62
TCF4-243ENST00000569357 AATFQ9NY61 560 aaKnown RBP eCLIP11.19□□□□□ -0.62
TCF4-243ENST00000569357 SAP30BPQ9UHR5 308 aaKnown RBP11.19□□□□□ -0.62
TCF4-243ENST00000569357 CACNA1FO60840 1977 aa11.18□□□□□ -0.62
TCF4-243ENST00000569357 SPDYE16A6NNV3 312 aaPredicted RBP11.18□□□□□ -0.62
TCF4-243ENST00000569357 CIAO1O76071 339 aa11.18□□□□□ -0.62
TCF4-243ENST00000569357 IGHA2P01877 340 aa11.18□□□□□ -0.62
TCF4-243ENST00000569357 VCAM1P19320 739 aa11.18□□□□□ -0.62
TCF4-243ENST00000569357 ERCC3P19447 782 aa11.18□□□□□ -0.62
TCF4-243ENST00000569357 IL15P40933 162 aaPredicted RBP11.18□□□□□ -0.62
TCF4-243ENST00000569357 USP14P54578 494 aa11.18□□□□□ -0.62
TCF4-243ENST00000569357 PI16Q6UXB8 463 aa11.18□□□□□ -0.62
TCF4-243ENST00000569357 ZNF467Q7Z7K2 595 aaPredicted RBP11.18□□□□□ -0.62
TCF4-243ENST00000569357 NCAPG2Q86XI2 1143 aa11.18□□□□□ -0.62
TCF4-243ENST00000569357 TMEM199Q8N511 208 aa11.18□□□□□ -0.62
TCF4-243ENST00000569357 VTI1AQ96AJ9 217 aa11.18□□□□□ -0.62
TCF4-243ENST00000569357 C12orf42Q96LP6 360 aa11.18□□□□□ -0.62
TCF4-243ENST00000569357 NEUROD6Q96NK8 337 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms