RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 BLOC1S2Q6QNY1 142 aa18.85■□□□□ 0.61
USB1-215ENST00000569252 SNCAIPQ9Y6H5 919 aa18.85■□□□□ 0.61
USB1-215ENST00000569252 DDX60LQ5H9U9 1706 aaKnown RBP18.85■□□□□ 0.61
USB1-215ENST00000569252 TTLL1O95922 423 aa18.84■□□□□ 0.61
USB1-215ENST00000569252 FXR1P51114 621 aaKnown RBP eCLIP18.84■□□□□ 0.61
USB1-215ENST00000569252 ICA1Q05084 483 aa18.84■□□□□ 0.61
USB1-215ENST00000569252 OTUD7BQ6GQQ9 843 aa18.84■□□□□ 0.61
USB1-215ENST00000569252 ZNF280CQ8ND82 737 aa18.84■□□□□ 0.61
USB1-215ENST00000569252 TTC14Q96N46 770 aa18.84■□□□□ 0.61
USB1-215ENST00000569252 FEZ1Q99689 392 aa18.84■□□□□ 0.61
USB1-215ENST00000569252 TCP11L1Q9NUJ3 509 aa18.84■□□□□ 0.61
USB1-215ENST00000569252 STX8Q9UNK0 236 aa18.84■□□□□ 0.61
USB1-215ENST00000569252 COLQQ9Y215 455 aaPredicted RBP18.84■□□□□ 0.61
USB1-215ENST00000569252 CYP46A1Q9Y6A2 500 aa18.84■□□□□ 0.61
USB1-215ENST00000569252 SPDYE5A6NIY4 337 aa18.83■□□□□ 0.6
USB1-215ENST00000569252 IFIT3O14879 490 aaKnown RBP18.83■□□□□ 0.6
USB1-215ENST00000569252 CASTP20810 708 aaKnown RBP18.83■□□□□ 0.6
USB1-215ENST00000569252 CTGFP29279 349 aa18.83■□□□□ 0.6
USB1-215ENST00000569252 DHX32Q7L7V1 743 aaKnown RBP18.83■□□□□ 0.6
USB1-215ENST00000569252 ZSCAN10Q96SZ4 725 aaPredicted RBP18.83■□□□□ 0.6
USB1-215ENST00000569252 CLIP2Q9UDT6 1046 aa18.83■□□□□ 0.6
USB1-215ENST00000569252 USP17L10C9JJH3 530 aa18.82■□□□□ 0.6
USB1-215ENST00000569252 PRC1O43663 620 aa18.82■□□□□ 0.6
USB1-215ENST00000569252 USP14P54578 494 aa18.82■□□□□ 0.6
USB1-215ENST00000569252 SPP2Q13103 211 aa18.82■□□□□ 0.6
USB1-215ENST00000569252 PPIL2Q13356 520 aa18.82■□□□□ 0.6
USB1-215ENST00000569252 SLC9C1Q4G0N8 1177 aa18.82■□□□□ 0.6
USB1-215ENST00000569252 STOX1Q6ZVD7 989 aa18.82■□□□□ 0.6
USB1-215ENST00000569252 TMTC2Q8N394 836 aa18.82■□□□□ 0.6
USB1-215ENST00000569252 CEP95Q96GE4 821 aa18.82■□□□□ 0.6
USB1-215ENST00000569252 ZKSCAN3Q9BRR0 538 aa18.82■□□□□ 0.6
USB1-215ENST00000569252 WDR18Q9BV38 432 aa18.82■□□□□ 0.6
USB1-215ENST00000569252 TM6SF1Q9BZW5 370 aa18.82■□□□□ 0.6
USB1-215ENST00000569252 MTMR4Q9NYA4 1195 aa18.82■□□□□ 0.6
USB1-215ENST00000569252 TACC3Q9Y6A5 838 aa18.82■□□□□ 0.6
USB1-215ENST00000569252 TAF6LQ9Y6J9 622 aa18.82■□□□□ 0.6
USB1-215ENST00000569252 TRIM75PA6NK02 468 aa18.81■□□□□ 0.6
USB1-215ENST00000569252 C19orf81C9J6K1 198 aa18.81■□□□□ 0.6
USB1-215ENST00000569252 BTBD19C9JJ37 291 aa18.81■□□□□ 0.6
USB1-215ENST00000569252 CXCL11O14625 94 aa18.81■□□□□ 0.6
USB1-215ENST00000569252 RAD21O60216 631 aa18.81■□□□□ 0.6
USB1-215ENST00000569252 EEF2P13639 858 aaKnown RBP18.81■□□□□ 0.6
USB1-215ENST00000569252 ADCK5Q3MIX3 580 aa18.81■□□□□ 0.6
USB1-215ENST00000569252 TMEM67Q5HYA8 995 aa18.81■□□□□ 0.6
USB1-215ENST00000569252 IFIT1BQ5T764 474 aaKnown RBP18.81■□□□□ 0.6
USB1-215ENST00000569252 CHST3Q7LGC8 479 aa18.81■□□□□ 0.6
USB1-215ENST00000569252 DGKHQ86XP1 1220 aa18.81■□□□□ 0.6
USB1-215ENST00000569252 TMEM87BQ96K49 555 aa18.81■□□□□ 0.6
USB1-215ENST00000569252 MTA3Q9BTC8 594 aa18.81■□□□□ 0.6
USB1-215ENST00000569252 ZFYVE28Q9HCC9 887 aa18.81■□□□□ 0.6
USB1-215ENST00000569252 TMOD4Q9NZQ9 345 aa18.81■□□□□ 0.6
USB1-215ENST00000569252 NYAP2Q9P242 653 aa18.81■□□□□ 0.6
USB1-215ENST00000569252 RANBP2P49792 3224 aaKnown RBP18.81■□□□□ 0.6
USB1-215ENST00000569252 SIPA1L1O43166 1804 aa18.8■□□□□ 0.6
USB1-215ENST00000569252 RBM25P49756 843 aaKnown RBP18.8■□□□□ 0.6
USB1-215ENST00000569252 GTF2A2P52657 109 aa18.8■□□□□ 0.6
USB1-215ENST00000569252 JAG1P78504 1218 aa18.8■□□□□ 0.6
USB1-215ENST00000569252 SNAPC2Q13487 334 aa18.8■□□□□ 0.6
USB1-215ENST00000569252 WTAPQ15007 396 aa18.8■□□□□ 0.6
USB1-215ENST00000569252 SYNE3Q6ZMZ3 975 aa18.8■□□□□ 0.6
USB1-215ENST00000569252 NFXL1Q6ZNB6 911 aa18.8■□□□□ 0.6
USB1-215ENST00000569252 RUFY3Q7L099 469 aa18.8■□□□□ 0.6
USB1-215ENST00000569252 CYB5R4Q7L1T6 521 aa18.8■□□□□ 0.6
USB1-215ENST00000569252 MB21D2Q8IYB1 491 aaPredicted RBP18.8■□□□□ 0.6
USB1-215ENST00000569252 TMEM106CQ9BVX2 250 aa18.8■□□□□ 0.6
USB1-215ENST00000569252 KAT14Q9H8E8 782 aa18.8■□□□□ 0.6
USB1-215ENST00000569252 GOPCQ9HD26 462 aa18.8■□□□□ 0.6
USB1-215ENST00000569252 IL17RBQ9NRM6 502 aa18.8■□□□□ 0.6
USB1-215ENST00000569252 AFG3L2Q9Y4W6 797 aa18.8■□□□□ 0.6
USB1-215ENST00000569252 TNKSO95271 1327 aa18.79■□□□□ 0.6
USB1-215ENST00000569252 H0YGN5 161 aa18.79■□□□□ 0.6
USB1-215ENST00000569252 IRF6O14896 467 aa18.79■□□□□ 0.6
USB1-215ENST00000569252 TOP1P11387 765 aaKnown RBP18.79■□□□□ 0.6
USB1-215ENST00000569252 GUCY1A2P33402 732 aa18.79■□□□□ 0.6
USB1-215ENST00000569252 BACE1P56817 501 aa18.79■□□□□ 0.6
USB1-215ENST00000569252 MTFR1Q15390 333 aa18.79■□□□□ 0.6
USB1-215ENST00000569252 SHROOM1Q2M3G4 852 aaPredicted RBP18.79■□□□□ 0.6
USB1-215ENST00000569252 USP17L2Q6R6M4 530 aa18.79■□□□□ 0.6
USB1-215ENST00000569252 FASTKD5Q7L8L6 764 aaKnown RBP18.79■□□□□ 0.6
USB1-215ENST00000569252 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.79■□□□□ 0.6
USB1-215ENST00000569252 ZSWIM6Q9HCJ5 1215 aa18.79■□□□□ 0.6
USB1-215ENST00000569252 CPA4Q9UI42 421 aa18.79■□□□□ 0.6
USB1-215ENST00000569252 PLIN4Q96Q06 1357 aa18.79■□□□□ 0.6
USB1-215ENST00000569252 LAMA4Q16363 1823 aa18.79■□□□□ 0.6
USB1-215ENST00000569252 MYH8P13535 1937 aa18.78■□□□□ 0.6
USB1-215ENST00000569252 WDR19Q8NEZ3 1342 aa18.78■□□□□ 0.6
USB1-215ENST00000569252 IGKV6D-41A0A0C4DH26 115 aa18.78■□□□□ 0.6
USB1-215ENST00000569252 CCDC69A6NI79 296 aa18.78■□□□□ 0.6
USB1-215ENST00000569252 NMT2O60551 498 aa18.78■□□□□ 0.6
USB1-215ENST00000569252 CETPP11597 493 aa18.78■□□□□ 0.6
USB1-215ENST00000569252 RPS6KB1P23443 525 aa18.78■□□□□ 0.6
USB1-215ENST00000569252 CCDC84Q86UT8 332 aaPredicted RBP18.78■□□□□ 0.6
USB1-215ENST00000569252 IL27Q8NEV9 243 aa18.78■□□□□ 0.6
USB1-215ENST00000569252 MKL1Q969V6 931 aa18.78■□□□□ 0.6
USB1-215ENST00000569252 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.78■□□□□ 0.6
USB1-215ENST00000569252 SYNPO2Q9UMS6 1093 aa18.78■□□□□ 0.6
USB1-215ENST00000569252 MTMR2Q13614 643 aa18.77■□□□□ 0.6
USB1-215ENST00000569252 ZYXQ15942 572 aaKnown RBP18.77■□□□□ 0.6
USB1-215ENST00000569252 CATIPQ7Z7H3 387 aa18.77■□□□□ 0.6
USB1-215ENST00000569252 SHISA4Q96DD7 197 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms