RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	MFSD2A	Q8NA29	543 aa		6.54	□□□□□ -1.36
UBR1-209	ENST00000569243	IVNS1ABP	Q9Y6Y0	642 aa		6.54	□□□□□ -1.36
UBR1-209	ENST00000569243	PAGE1	O75459	146 aa		6.53	□□□□□ -1.36
UBR1-209	ENST00000569243	EGR3	Q06889	387 aa		6.53	□□□□□ -1.36
UBR1-209	ENST00000569243	NR0B2	Q15466	257 aa		6.53	□□□□□ -1.36
UBR1-209	ENST00000569243	NKG7	Q16617	165 aa		6.53	□□□□□ -1.36
UBR1-209	ENST00000569243	XAGE3	Q8WTP9	111 aa		6.53	□□□□□ -1.36
UBR1-209	ENST00000569243	ELMO3	Q96BJ8	720 aa		6.53	□□□□□ -1.36
UBR1-209	ENST00000569243	TRAIP	Q9BWF2	469 aa		6.53	□□□□□ -1.36
UBR1-209	ENST00000569243	SIRT5	Q9NXA8	310 aa		6.53	□□□□□ -1.36
UBR1-209	ENST00000569243	PCDHA4	Q9UN74	947 aa		6.53	□□□□□ -1.36
UBR1-209	ENST00000569243	TIMELESS	Q9UNS1	1208 aa		6.53	□□□□□ -1.36
UBR1-209	ENST00000569243	PRAMEF27	A3QJZ7	478 aa		6.52	□□□□□ -1.37
UBR1-209	ENST00000569243	OR14I1	A6ND48	311 aa		6.52	□□□□□ -1.37
UBR1-209	ENST00000569243	CILP	O75339	1184 aa		6.52	□□□□□ -1.37
UBR1-209	ENST00000569243	CYP7A1	P22680	504 aa		6.52	□□□□□ -1.37
UBR1-209	ENST00000569243	PCNX4	Q63HM2	1172 aa		6.52	□□□□□ -1.37
UBR1-209	ENST00000569243	PPP1R13L	Q8WUF5	828 aa		6.52	□□□□□ -1.37
UBR1-209	ENST00000569243	TACC3	Q9Y6A5	838 aa		6.52	□□□□□ -1.37
UBR1-209	ENST00000569243	N4BP3	O15049	544 aa		6.51	□□□□□ -1.37
UBR1-209	ENST00000569243	RPS26	P62854	115 aa	Known RBP	6.51	□□□□□ -1.37
UBR1-209	ENST00000569243	SNX17	Q15036	470 aa		6.51	□□□□□ -1.37
UBR1-209	ENST00000569243	ZNF827	Q17R98	1081 aa		6.51	□□□□□ -1.37
UBR1-209	ENST00000569243	GAB4	Q2WGN9	574 aa		6.51	□□□□□ -1.37
UBR1-209	ENST00000569243	HDX	Q7Z353	690 aa		6.51	□□□□□ -1.37
UBR1-209	ENST00000569243	CDH24	Q86UP0	819 aa		6.51	□□□□□ -1.37
UBR1-209	ENST00000569243	SIRT2	Q8IXJ6	389 aa		6.51	□□□□□ -1.37
UBR1-209	ENST00000569243	PIWIL2	Q8TC59	973 aa	Known RBP	6.51	□□□□□ -1.37
UBR1-209	ENST00000569243	DUSP15	Q9H1R2	295 aa	Predicted RBP	6.51	□□□□□ -1.37
UBR1-209	ENST00000569243	DUSP13	Q9UII6	198 aa		6.51	□□□□□ -1.37
UBR1-209	ENST00000569243	WWC3	Q9ULE0	1092 aa		6.51	□□□□□ -1.37
UBR1-209	ENST00000569243	SNCAIP	Q9Y6H5	919 aa		6.51	□□□□□ -1.37
UBR1-209	ENST00000569243		K7ESM1	405 aa		6.5	□□□□□ -1.37
UBR1-209	ENST00000569243	LDHB	P07195	334 aa	Known RBP	6.5	□□□□□ -1.37
UBR1-209	ENST00000569243	USP17L7	P0C7H9	530 aa		6.5	□□□□□ -1.37
UBR1-209	ENST00000569243	GNA15	P30679	374 aa		6.5	□□□□□ -1.37
UBR1-209	ENST00000569243	ADGRF1	Q5T601	910 aa		6.5	□□□□□ -1.37
UBR1-209	ENST00000569243	CNKSR3	Q6P9H4	555 aa		6.5	□□□□□ -1.37
UBR1-209	ENST00000569243	DHX38	Q92620	1227 aa	Known RBP	6.5	□□□□□ -1.37
UBR1-209	ENST00000569243	SHISA4	Q96DD7	197 aa		6.5	□□□□□ -1.37
UBR1-209	ENST00000569243	COX4I2	Q96KJ9	171 aa		6.5	□□□□□ -1.37
UBR1-209	ENST00000569243	SORCS2	Q96PQ0	1159 aa		6.5	□□□□□ -1.37
UBR1-209	ENST00000569243	MATN3	O15232	486 aa		6.49	□□□□□ -1.37
UBR1-209	ENST00000569243	PRPF40A	O75400	957 aa	Known RBP	6.49	□□□□□ -1.37
UBR1-209	ENST00000569243	FBXO24	O75426	580 aa		6.49	□□□□□ -1.37
UBR1-209	ENST00000569243	P4HB	P07237	508 aa	Known RBP	6.49	□□□□□ -1.37
UBR1-209	ENST00000569243	HMGA2	P52926	109 aa		6.49	□□□□□ -1.37
UBR1-209	ENST00000569243	RASIP1	Q5U651	963 aa		6.49	□□□□□ -1.37
UBR1-209	ENST00000569243	SPPL2C	Q8IUH8	684 aa		6.49	□□□□□ -1.37
UBR1-209	ENST00000569243	SETDB2	Q96T68	719 aa		6.49	□□□□□ -1.37
UBR1-209	ENST00000569243	WNT10A	Q9GZT5	417 aa		6.49	□□□□□ -1.37
UBR1-209	ENST00000569243	CNTD2	Q9H8S5	307 aa		6.49	□□□□□ -1.37
UBR1-209	ENST00000569243	CELA3A	P09093	270 aa		6.48	□□□□□ -1.37
UBR1-209	ENST00000569243	EIF4B	P23588	611 aa	Known RBP	6.48	□□□□□ -1.37
UBR1-209	ENST00000569243	INPP5A	Q14642	412 aa		6.48	□□□□□ -1.37
UBR1-209	ENST00000569243	PRAMEF13	Q5VWM6	474 aa		6.48	□□□□□ -1.37
UBR1-209	ENST00000569243	TMEFF1	Q8IYR6	380 aa		6.48	□□□□□ -1.37
UBR1-209	ENST00000569243	LINC01356	Q8N9X3	169 aa		6.48	□□□□□ -1.37
UBR1-209	ENST00000569243	MENT	Q9BUN1	341 aa		6.48	□□□□□ -1.37
UBR1-209	ENST00000569243	TRIT1	Q9H3H1	467 aa	Known RBP	6.48	□□□□□ -1.37
UBR1-209	ENST00000569243	AK5	Q9Y6K8	562 aa		6.48	□□□□□ -1.37
UBR1-209	ENST00000569243	IRS4	O14654	1257 aa	Predicted RBP	6.47	□□□□□ -1.37
UBR1-209	ENST00000569243	LTK	P29376	864 aa		6.47	□□□□□ -1.37
UBR1-209	ENST00000569243	FAM129C	Q86XR2	697 aa		6.47	□□□□□ -1.37
UBR1-209	ENST00000569243	TP53I13	Q8NBR0	393 aa	Predicted RBP	6.47	□□□□□ -1.37
UBR1-209	ENST00000569243	GAL3ST3	Q96A11	431 aa		6.47	□□□□□ -1.37
UBR1-209	ENST00000569243	SYTL4	Q96C24	671 aa	Predicted RBP	6.47	□□□□□ -1.37
UBR1-209	ENST00000569243		Q96M66	194 aa		6.47	□□□□□ -1.37
UBR1-209	ENST00000569243	EBF1	Q9UH73	591 aa		6.47	□□□□□ -1.37
UBR1-209	ENST00000569243	RLBP1	P12271	317 aa		6.46	□□□□□ -1.38
UBR1-209	ENST00000569243	VIPR1	P32241	457 aa		6.46	□□□□□ -1.38
UBR1-209	ENST00000569243	MAGEA10	P43363	369 aa	Predicted RBP	6.46	□□□□□ -1.38
UBR1-209	ENST00000569243	ETF1	P62495	437 aa	Known RBP	6.46	□□□□□ -1.38
UBR1-209	ENST00000569243	CHRNE	Q04844	493 aa		6.46	□□□□□ -1.38
UBR1-209	ENST00000569243	TTBK2	Q6IQ55	1244 aa		6.46	□□□□□ -1.38
UBR1-209	ENST00000569243	LRFN4	Q6PJG9	635 aa		6.46	□□□□□ -1.38
UBR1-209	ENST00000569243	HID1	Q8IV36	788 aa		6.46	□□□□□ -1.38
UBR1-209	ENST00000569243	TTF2	Q9UNY4	1162 aa	Known RBP	6.46	□□□□□ -1.38
UBR1-209	ENST00000569243	PCDHA11	Q9Y5I1	949 aa		6.46	□□□□□ -1.38
UBR1-209	ENST00000569243	CST3	P01034	146 aa	Predicted RBP	6.45	□□□□□ -1.38
UBR1-209	ENST00000569243	PTPN11	Q06124	597 aa	Predicted RBP	6.45	□□□□□ -1.38
UBR1-209	ENST00000569243	PLPPR2	Q96GM1	343 aa		6.45	□□□□□ -1.38
UBR1-209	ENST00000569243	PWWP2A	Q96N64	755 aa		6.45	□□□□□ -1.38
UBR1-209	ENST00000569243	SCAND2P	Q9GZW5	306 aa	Predicted RBP	6.45	□□□□□ -1.38
UBR1-209	ENST00000569243	GPATCH2	Q9NW75	528 aa		6.45	□□□□□ -1.38
UBR1-209	ENST00000569243	CNOT11	Q9UKZ1	510 aa	Known RBP	6.45	□□□□□ -1.38
UBR1-209	ENST00000569243	HRK	O00198	91 aa		6.44	□□□□□ -1.38
UBR1-209	ENST00000569243	GFRA2	O00451	464 aa		6.44	□□□□□ -1.38
UBR1-209	ENST00000569243	CDR1	P51861	262 aa		6.44	□□□□□ -1.38
UBR1-209	ENST00000569243	CCDC85B	Q15834	202 aa	Predicted RBP	6.44	□□□□□ -1.38
UBR1-209	ENST00000569243	UBXN11	Q5T124	520 aa		6.44	□□□□□ -1.38
UBR1-209	ENST00000569243	AGMO	Q6ZNB7	445 aa		6.44	□□□□□ -1.38
UBR1-209	ENST00000569243	ANKS4B	Q8N8V4	417 aa		6.44	□□□□□ -1.38
UBR1-209	ENST00000569243	MZB1	Q8WU39	189 aa		6.44	□□□□□ -1.38
UBR1-209	ENST00000569243	KCNC1	P48547	511 aa		6.43	□□□□□ -1.38
UBR1-209	ENST00000569243	ADAM17	P78536	824 aa		6.43	□□□□□ -1.38
UBR1-209	ENST00000569243	ZFYVE27	Q5T4F4	411 aa		6.43	□□□□□ -1.38
UBR1-209	ENST00000569243	TSPYL5	Q86VY4	417 aa	Predicted RBP	6.43	□□□□□ -1.38
UBR1-209	ENST00000569243	VWCE	Q96DN2	955 aa		6.43	□□□□□ -1.38
UBR1-209	ENST00000569243	EFEMP2	O95967	443 aa		6.42	□□□□□ -1.38

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