RNA–Protein interactions for RNA: ENST00000569124.1

SCAMP2-210, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 4

Gene SCAMP2, Length 538 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-210ENST00000569124 MIGA1Q8NAN2 632 aa18.6■□□□□ 0.57
SCAMP2-210ENST00000569124 BOLA2Q9H3K6 86 aa18.6■□□□□ 0.57
SCAMP2-210ENST00000569124 SERPINB13Q9UIV8 391 aa18.6■□□□□ 0.57
SCAMP2-210ENST00000569124 RABGAP1Q9Y3P9 1069 aa18.6■□□□□ 0.57
SCAMP2-210ENST00000569124 SMCHD1A6NHR9 2005 aa18.6■□□□□ 0.57
SCAMP2-210ENST00000569124 COL6A1P12109 1028 aa18.59■□□□□ 0.57
SCAMP2-210ENST00000569124 RAB3GAP1Q15042 981 aa18.59■□□□□ 0.57
SCAMP2-210ENST00000569124 TATDN1Q6P1N9 297 aa18.59■□□□□ 0.57
SCAMP2-210ENST00000569124 SKAP1Q86WV1 359 aa18.59■□□□□ 0.57
SCAMP2-210ENST00000569124 PI4K2BQ8TCG2 481 aa18.59■□□□□ 0.57
SCAMP2-210ENST00000569124 DNAJC2Q99543 621 aaKnown RBP18.59■□□□□ 0.57
SCAMP2-210ENST00000569124 EHD4Q9H223 541 aa18.59■□□□□ 0.57
SCAMP2-210ENST00000569124 TTC22Q5TAA0 569 aa18.58■□□□□ 0.56
SCAMP2-210ENST00000569124 MFSD14CQ5VZR4 134 aa18.58■□□□□ 0.56
SCAMP2-210ENST00000569124 LHX8Q68G74 356 aa18.58■□□□□ 0.56
SCAMP2-210ENST00000569124 MAGEB6Q8N7X4 407 aa18.58■□□□□ 0.56
SCAMP2-210ENST00000569124 IVNS1ABPQ9Y6Y0 642 aa18.58■□□□□ 0.56
SCAMP2-210ENST00000569124 DNAH12Q6ZR08 3092 aa18.58■□□□□ 0.56
SCAMP2-210ENST00000569124 TRIM6-TRIM34B2RNG4 842 aa18.57■□□□□ 0.56
SCAMP2-210ENST00000569124 VCAM1P19320 739 aa18.57■□□□□ 0.56
SCAMP2-210ENST00000569124 LRRC26Q2I0M4 334 aa18.57■□□□□ 0.56
SCAMP2-210ENST00000569124 ABCB5Q2M3G0 1257 aa18.57■□□□□ 0.56
SCAMP2-210ENST00000569124 CERKLQ49MI3 558 aaPredicted RBP18.57■□□□□ 0.56
SCAMP2-210ENST00000569124 Q7L0L9 218 aa18.57■□□□□ 0.56
SCAMP2-210ENST00000569124 TTC6Q86TZ1 520 aa18.57■□□□□ 0.56
SCAMP2-210ENST00000569124 EDC3Q96F86 508 aaKnown RBP18.57■□□□□ 0.56
SCAMP2-210ENST00000569124 HAUS7Q99871 368 aa18.57■□□□□ 0.56
SCAMP2-210ENST00000569124 CABP5Q9NP86 173 aa18.57■□□□□ 0.56
SCAMP2-210ENST00000569124 SLC15A5A6NIM6 579 aa18.56■□□□□ 0.56
SCAMP2-210ENST00000569124 CNMDO75829 334 aa18.56■□□□□ 0.56
SCAMP2-210ENST00000569124 MAP3K12Q12852 859 aa18.56■□□□□ 0.56
SCAMP2-210ENST00000569124 TTF1Q15361 905 aaPredicted RBP18.56■□□□□ 0.56
SCAMP2-210ENST00000569124 TMED8Q6PL24 325 aaPredicted RBP18.56■□□□□ 0.56
SCAMP2-210ENST00000569124 POTEEQ6S8J3 1075 aa18.56■□□□□ 0.56
SCAMP2-210ENST00000569124 CATSPERGQ6ZRH7 1159 aa18.56■□□□□ 0.56
SCAMP2-210ENST00000569124 KIAA1683Q9H0B3 1180 aa18.56■□□□□ 0.56
SCAMP2-210ENST00000569124 PAG1Q9NWQ8 432 aa18.56■□□□□ 0.56
SCAMP2-210ENST00000569124 NDUFB9Q9Y6M9 179 aa18.56■□□□□ 0.56
SCAMP2-210ENST00000569124 MSCO60682 206 aa18.55■□□□□ 0.56
SCAMP2-210ENST00000569124 MDM2Q00987 491 aaPredicted RBP18.55■□□□□ 0.56
SCAMP2-210ENST00000569124 LBX2Q6XYB7 198 aa18.55■□□□□ 0.56
SCAMP2-210ENST00000569124 STXBP5LQ9Y2K9 1186 aa18.55■□□□□ 0.56
SCAMP2-210ENST00000569124 GOLIM4O00461 696 aa18.54■□□□□ 0.56
SCAMP2-210ENST00000569124 PTPREP23469 700 aa18.54■□□□□ 0.56
SCAMP2-210ENST00000569124 CNGA1P29973 690 aa18.54■□□□□ 0.56
SCAMP2-210ENST00000569124 ATP2B2Q01814 1243 aa18.54■□□□□ 0.56
SCAMP2-210ENST00000569124 GRB14Q14449 540 aa18.54■□□□□ 0.56
SCAMP2-210ENST00000569124 RILPL2Q969X0 211 aa18.54■□□□□ 0.56
SCAMP2-210ENST00000569124 RPAP3Q9H6T3 665 aaPredicted RBP18.54■□□□□ 0.56
SCAMP2-210ENST00000569124 FLRT1Q9NZU1 646 aa18.54■□□□□ 0.56
SCAMP2-210ENST00000569124 DDX20Q9UHI6 824 aaKnown RBP18.54■□□□□ 0.56
SCAMP2-210ENST00000569124 MYH4Q9Y623 1939 aa18.54■□□□□ 0.56
SCAMP2-210ENST00000569124 SPDYE16A6NNV3 312 aaPredicted RBP18.53■□□□□ 0.56
SCAMP2-210ENST00000569124 LRRFIP1Q32MZ4 808 aaKnown RBP18.53■□□□□ 0.56
SCAMP2-210ENST00000569124 BMP2KLQ5H9B9 411 aa18.53■□□□□ 0.56
SCAMP2-210ENST00000569124 ACER1Q8TDN7 264 aa18.53■□□□□ 0.56
SCAMP2-210ENST00000569124 EVI5LQ96CN4 794 aa18.53■□□□□ 0.56
SCAMP2-210ENST00000569124 LBHD1Q9BQE6 289 aaPredicted RBP18.53■□□□□ 0.56
SCAMP2-210ENST00000569124 SENP6Q9GZR1 1112 aaPredicted RBP18.53■□□□□ 0.56
SCAMP2-210ENST00000569124 ANTXR1Q9H6X2 564 aa18.53■□□□□ 0.56
SCAMP2-210ENST00000569124 MTMR10Q9NXD2 777 aa18.53■□□□□ 0.56
SCAMP2-210ENST00000569124 BTBD7Q9P203 1132 aa18.53■□□□□ 0.56
SCAMP2-210ENST00000569124 POLR3DP05423 398 aaPredicted RBP18.52■□□□□ 0.56
SCAMP2-210ENST00000569124 HOXC6P09630 235 aa18.52■□□□□ 0.56
SCAMP2-210ENST00000569124 SHMT1P34896 483 aa18.52■□□□□ 0.56
SCAMP2-210ENST00000569124 LPAR1Q92633 364 aa18.52■□□□□ 0.56
SCAMP2-210ENST00000569124 FSD1Q9BTV5 496 aa18.52■□□□□ 0.56
SCAMP2-210ENST00000569124 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.52■□□□□ 0.56
SCAMP2-210ENST00000569124 MAGEB6P1A0A0J9YX57 407 aa18.51■□□□□ 0.55
SCAMP2-210ENST00000569124 DNM1LO00429 736 aa18.51■□□□□ 0.55
SCAMP2-210ENST00000569124 GSPT1P15170 499 aaKnown RBP18.51■□□□□ 0.55
SCAMP2-210ENST00000569124 PRKAG2Q9UGJ0 569 aa18.51■□□□□ 0.55
SCAMP2-210ENST00000569124 MCM3APO60318 1980 aa18.51■□□□□ 0.55
SCAMP2-210ENST00000569124 MPHOSPH10O00566 681 aaKnown RBP18.5■□□□□ 0.55
SCAMP2-210ENST00000569124 CYP2C19P33261 490 aa18.5■□□□□ 0.55
SCAMP2-210ENST00000569124 PLCD1P51178 756 aa18.5■□□□□ 0.55
SCAMP2-210ENST00000569124 SEPT2Q15019 361 aa18.5■□□□□ 0.55
SCAMP2-210ENST00000569124 ZSCAN25Q6NSZ9 544 aa18.5■□□□□ 0.55
SCAMP2-210ENST00000569124 KBTBD3Q8NAB2 608 aa18.5■□□□□ 0.55
SCAMP2-210ENST00000569124 NPLOC4Q8TAT6 608 aa18.5■□□□□ 0.55
SCAMP2-210ENST00000569124 RIOK1Q9BRS2 568 aaKnown RBP18.5■□□□□ 0.55
SCAMP2-210ENST00000569124 CRNKL1Q9BZJ0 848 aaKnown RBP18.5■□□□□ 0.55
SCAMP2-210ENST00000569124 TANGO6Q9C0B7 1094 aa18.5■□□□□ 0.55
SCAMP2-210ENST00000569124 CYBAP13498 195 aa18.49■□□□□ 0.55
SCAMP2-210ENST00000569124 SDSP20132 328 aa18.49■□□□□ 0.55
SCAMP2-210ENST00000569124 ATN1P54259 1190 aaPredicted RBP18.49■□□□□ 0.55
SCAMP2-210ENST00000569124 DPP9Q86TI2 863 aa18.49■□□□□ 0.55
SCAMP2-210ENST00000569124 MCM9Q9NXL9 1143 aa18.49■□□□□ 0.55
SCAMP2-210ENST00000569124 A0A0C4DFX4 3053 aa18.49■□□□□ 0.55
SCAMP2-210ENST00000569124 GREB1LQ9C091 1923 aaPredicted RBP18.49■□□□□ 0.55
SCAMP2-210ENST00000569124 KBTBD13C9JR72 458 aa18.48■□□□□ 0.55
SCAMP2-210ENST00000569124 ADORA2AP29274 412 aa18.48■□□□□ 0.55
SCAMP2-210ENST00000569124 GUCY1A2P33402 732 aa18.48■□□□□ 0.55
SCAMP2-210ENST00000569124 RTP1P59025 263 aa18.48■□□□□ 0.55
SCAMP2-210ENST00000569124 UNC80Q8N2C7 3258 aa18.47■□□□□ 0.55
SCAMP2-210ENST00000569124 LAMA2P24043 3122 aaKnown RBP18.47■□□□□ 0.55
SCAMP2-210ENST00000569124 HIP1O00291 1037 aa18.47■□□□□ 0.55
SCAMP2-210ENST00000569124 PDE6AP16499 860 aa18.47■□□□□ 0.55
SCAMP2-210ENST00000569124 GABPAQ06546 454 aa18.47■□□□□ 0.55
SCAMP2-210ENST00000569124 COG2Q14746 738 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms