RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 IGKV6D-41A0A0C4DH26 115 aa9.38□□□□□ -0.91
CDH3-209ENST00000569080 HMGCRP04035 888 aa9.38□□□□□ -0.91
CDH3-209ENST00000569080 PDE1AP54750 535 aa9.38□□□□□ -0.91
CDH3-209ENST00000569080 UBXN2AP68543 259 aa9.38□□□□□ -0.91
CDH3-209ENST00000569080 TRIM32Q13049 653 aa9.38□□□□□ -0.91
CDH3-209ENST00000569080 MORN1Q5T089 497 aa9.38□□□□□ -0.91
CDH3-209ENST00000569080 MAP3K21Q5TCX8 1036 aa9.38□□□□□ -0.91
CDH3-209ENST00000569080 ANKRD45Q5TZF3 282 aa9.38□□□□□ -0.91
CDH3-209ENST00000569080 GPR142Q7Z601 462 aa9.38□□□□□ -0.91
CDH3-209ENST00000569080 EXOC6Q8TAG9 804 aa9.38□□□□□ -0.91
CDH3-209ENST00000569080 U2AF1L4Q8WU68 220 aaKnown RBP9.38□□□□□ -0.91
CDH3-209ENST00000569080 SOCS4Q8WXH5 440 aa9.38□□□□□ -0.91
CDH3-209ENST00000569080 LPAR1Q92633 364 aa9.38□□□□□ -0.91
CDH3-209ENST00000569080 DDRGK1Q96HY6 314 aa9.38□□□□□ -0.91
CDH3-209ENST00000569080 PAGR1Q9BTK6 254 aa9.38□□□□□ -0.91
CDH3-209ENST00000569080 FSD1Q9BTV5 496 aa9.38□□□□□ -0.91
CDH3-209ENST00000569080 RNF208Q9H0X6 261 aa9.38□□□□□ -0.91
CDH3-209ENST00000569080 VCPKMTQ9H867 229 aa9.38□□□□□ -0.91
CDH3-209ENST00000569080 CEP290O15078 2479 aa9.37□□□□□ -0.91
CDH3-209ENST00000569080 IGHA2P01877 340 aa9.37□□□□□ -0.91
CDH3-209ENST00000569080 IGHDP01880 384 aa9.37□□□□□ -0.91
CDH3-209ENST00000569080 XRCC5P13010 732 aaKnown RBP9.37□□□□□ -0.91
CDH3-209ENST00000569080 EEF2P13639 858 aaKnown RBP9.37□□□□□ -0.91
CDH3-209ENST00000569080 GNAT2P19087 354 aa9.37□□□□□ -0.91
CDH3-209ENST00000569080 MAPK4P31152 587 aa9.37□□□□□ -0.91
CDH3-209ENST00000569080 AMOTL1Q8IY63 956 aa9.37□□□□□ -0.91
CDH3-209ENST00000569080 CRISPLD2Q9H0B8 497 aa9.37□□□□□ -0.91
CDH3-209ENST00000569080 ARHGEF10LQ9HCE6 1279 aa9.37□□□□□ -0.91
CDH3-209ENST00000569080 LAMA4Q16363 1823 aa9.37□□□□□ -0.91
CDH3-209ENST00000569080 PATL2C9JE40 543 aaKnown RBP9.36□□□□□ -0.91
CDH3-209ENST00000569080 WDR46O15213 610 aaKnown RBP9.36□□□□□ -0.91
CDH3-209ENST00000569080 TDO2P48775 406 aa9.36□□□□□ -0.91
CDH3-209ENST00000569080 GRB14Q14449 540 aa9.36□□□□□ -0.91
CDH3-209ENST00000569080 LRRFIP1Q32MZ4 808 aaKnown RBP9.36□□□□□ -0.91
CDH3-209ENST00000569080 CCDC129Q6ZRS4 1044 aa9.36□□□□□ -0.91
CDH3-209ENST00000569080 PLEKHH3Q7Z736 793 aa9.36□□□□□ -0.91
CDH3-209ENST00000569080 IFNL3Q8IZI9 196 aa9.36□□□□□ -0.91
CDH3-209ENST00000569080 SPICE1Q8N0Z3 855 aa9.36□□□□□ -0.91
CDH3-209ENST00000569080 NKX2-3Q8TAU0 364 aa9.36□□□□□ -0.91
CDH3-209ENST00000569080 APBA2Q99767 749 aa9.36□□□□□ -0.91
CDH3-209ENST00000569080 NUDT12Q9BQG2 462 aa9.36□□□□□ -0.91
CDH3-209ENST00000569080 LNPKQ9C0E8 428 aa9.36□□□□□ -0.91
CDH3-209ENST00000569080 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.36□□□□□ -0.91
CDH3-209ENST00000569080 SH2D4AQ9H788 454 aa9.36□□□□□ -0.91
CDH3-209ENST00000569080 KANSL2Q9H9L4 492 aa9.36□□□□□ -0.91
CDH3-209ENST00000569080 BIN2Q9UBW5 565 aaPredicted RBP9.36□□□□□ -0.91
CDH3-209ENST00000569080 LAMA3Q16787 3333 aa9.36□□□□□ -0.91
CDH3-209ENST00000569080 A0A0D9SFI3 127 aa9.35□□□□□ -0.91
CDH3-209ENST00000569080 MINDY4BA8MYZ0 360 aa9.35□□□□□ -0.91
CDH3-209ENST00000569080 SGPL1O95470 568 aa9.35□□□□□ -0.91
CDH3-209ENST00000569080 HOXC6P09630 235 aa9.35□□□□□ -0.91
CDH3-209ENST00000569080 CYP2B6P20813 491 aa9.35□□□□□ -0.91
CDH3-209ENST00000569080 DSG3P32926 999 aa9.35□□□□□ -0.91
CDH3-209ENST00000569080 MNX1P50219 401 aaPredicted RBP9.35□□□□□ -0.91
CDH3-209ENST00000569080 NUCB1Q02818 461 aa9.35□□□□□ -0.91
CDH3-209ENST00000569080 COG2Q14746 738 aa9.35□□□□□ -0.91
CDH3-209ENST00000569080 CCL14Q16627 93 aa9.35□□□□□ -0.91
CDH3-209ENST00000569080 VPS53Q5VIR6 699 aa9.35□□□□□ -0.91
CDH3-209ENST00000569080 REPS2Q8NFH8 660 aa9.35□□□□□ -0.91
CDH3-209ENST00000569080 EVI5LQ96CN4 794 aa9.35□□□□□ -0.91
CDH3-209ENST00000569080 ATG4CQ96DT6 458 aa9.35□□□□□ -0.91
CDH3-209ENST00000569080 FAM227BQ96M60 508 aa9.35□□□□□ -0.91
CDH3-209ENST00000569080 DEFB118Q96PH6 123 aa9.35□□□□□ -0.91
CDH3-209ENST00000569080 MOV10L1Q9BXT6 1211 aaKnown RBP9.35□□□□□ -0.91
CDH3-209ENST00000569080 TANGO6Q9C0B7 1094 aa9.35□□□□□ -0.91
CDH3-209ENST00000569080 SPATC1LQ9H0A9 340 aa9.35□□□□□ -0.91
CDH3-209ENST00000569080 FBXO28Q9NVF7 368 aa9.35□□□□□ -0.91
CDH3-209ENST00000569080 ADAMTS5Q9UNA0 930 aa9.35□□□□□ -0.91
CDH3-209ENST00000569080 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.35□□□□□ -0.91
CDH3-209ENST00000569080 TACC3Q9Y6A5 838 aa9.35□□□□□ -0.91
CDH3-209ENST00000569080 RPTORQ8N122 1335 aa9.34□□□□□ -0.91
CDH3-209ENST00000569080 SLC15A5A6NIM6 579 aa9.34□□□□□ -0.91
CDH3-209ENST00000569080 PRDM1O75626 825 aa9.34□□□□□ -0.91
CDH3-209ENST00000569080 FLOT1O75955 427 aa9.34□□□□□ -0.91
CDH3-209ENST00000569080 FARP2O94887 1054 aaPredicted RBP9.34□□□□□ -0.91
CDH3-209ENST00000569080 PRKAR2AP13861 404 aaKnown RBP9.34□□□□□ -0.91
CDH3-209ENST00000569080 ZKSCAN1P17029 563 aaPredicted RBP9.34□□□□□ -0.91
CDH3-209ENST00000569080 PTPREP23469 700 aa9.34□□□□□ -0.91
CDH3-209ENST00000569080 RGS2P41220 211 aa9.34□□□□□ -0.91
CDH3-209ENST00000569080 CCNA1P78396 465 aa9.34□□□□□ -0.91
CDH3-209ENST00000569080 PPARAQ07869 468 aa9.34□□□□□ -0.91
CDH3-209ENST00000569080 MAP2K5Q13163 448 aa9.34□□□□□ -0.91
CDH3-209ENST00000569080 ZNF589Q86UQ0 364 aaPredicted RBP9.34□□□□□ -0.91
CDH3-209ENST00000569080 CHD1LQ86WJ1 897 aa9.34□□□□□ -0.91
CDH3-209ENST00000569080 PLEKHM2Q8IWE5 1019 aa9.34□□□□□ -0.91
CDH3-209ENST00000569080 STK11IPQ8N1F8 1099 aa9.34□□□□□ -0.91
CDH3-209ENST00000569080 MB21D1Q8N884 522 aa9.34□□□□□ -0.91
CDH3-209ENST00000569080 SHCBP1Q8NEM2 672 aa9.34□□□□□ -0.91
CDH3-209ENST00000569080 CEP95Q96GE4 821 aa9.34□□□□□ -0.91
CDH3-209ENST00000569080 OSBPL3Q9H4L5 887 aa9.34□□□□□ -0.91
CDH3-209ENST00000569080 FLRT1Q9NZU1 646 aa9.34□□□□□ -0.91
CDH3-209ENST00000569080 NYAP2Q9P242 653 aa9.34□□□□□ -0.91
CDH3-209ENST00000569080 SZT2Q5T011 3432 aa9.34□□□□□ -0.91
CDH3-209ENST00000569080 ZMYM6O95789 1325 aa9.33□□□□□ -0.92
CDH3-209ENST00000569080 NDUFB10O96000 172 aa9.33□□□□□ -0.92
CDH3-209ENST00000569080 APPP05067 770 aa9.33□□□□□ -0.92
CDH3-209ENST00000569080 ERCC3P19447 782 aa9.33□□□□□ -0.92
CDH3-209ENST00000569080 CACNB2Q08289 660 aaPredicted RBP9.33□□□□□ -0.92
CDH3-209ENST00000569080 TMEM132BQ14DG7 1078 aa9.33□□□□□ -0.92
CDH3-209ENST00000569080 FAM83BQ5T0W9 1011 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms