RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 ZNF316A6NFI3 1004 aaPredicted RBP15.2■□□□□ 0.02
SNX29-207ENST00000568949 COBLO75128 1261 aa15.2■□□□□ 0.02
SNX29-207ENST00000568949 ERCC3P19447 782 aa15.2■□□□□ 0.02
SNX29-207ENST00000568949 GUCY1A2P33402 732 aa15.2■□□□□ 0.02
SNX29-207ENST00000568949 SHMT1P34896 483 aa15.2■□□□□ 0.02
SNX29-207ENST00000568949 POLA2Q14181 598 aa15.2■□□□□ 0.02
SNX29-207ENST00000568949 ANO1Q5XXA6 986 aa15.2■□□□□ 0.02
SNX29-207ENST00000568949 ABRAQ8N0Z2 381 aa15.2■□□□□ 0.02
SNX29-207ENST00000568949 MB21D1Q8N884 522 aa15.2■□□□□ 0.02
SNX29-207ENST00000568949 MIGA1Q8NAN2 632 aa15.2■□□□□ 0.02
SNX29-207ENST00000568949 SPATC1LQ9H0A9 340 aa15.2■□□□□ 0.02
SNX29-207ENST00000568949 MROH8Q9H579 483 aa15.2■□□□□ 0.02
SNX29-207ENST00000568949 PHF24Q9UPV7 400 aa15.2■□□□□ 0.02
SNX29-207ENST00000568949 SMCHD1A6NHR9 2005 aa15.2■□□□□ 0.02
SNX29-207ENST00000568949 IDH1O75874 414 aaKnown RBP15.19■□□□□ 0.02
SNX29-207ENST00000568949 MYCNP04198 464 aaPredicted RBP15.19■□□□□ 0.02
SNX29-207ENST00000568949 TLE2Q04725 743 aa15.19■□□□□ 0.02
SNX29-207ENST00000568949 OS9Q13438 667 aaPredicted RBP15.19■□□□□ 0.02
SNX29-207ENST00000568949 FERMT2Q96AC1 680 aa15.19■□□□□ 0.02
SNX29-207ENST00000568949 RNPC3Q96LT9 517 aaKnown RBP15.19■□□□□ 0.02
SNX29-207ENST00000568949 NRBP1Q9UHY1 535 aa15.19■□□□□ 0.02
SNX29-207ENST00000568949 A0A0G2JMZ2 1700 aa15.19■□□□□ 0.02
SNX29-207ENST00000568949 VCANP13611 3396 aa15.18■□□□□ 0.02
SNX29-207ENST00000568949 ZNFX1Q9P2E3 1918 aaKnown RBP15.18■□□□□ 0.02
SNX29-207ENST00000568949 KIAA0355O15063 1070 aa15.18■□□□□ 0.02
SNX29-207ENST00000568949 TRIM27P14373 513 aa15.18■□□□□ 0.02
SNX29-207ENST00000568949 PLCD1P51178 756 aa15.18■□□□□ 0.02
SNX29-207ENST00000568949 GABPAQ06546 454 aa15.18■□□□□ 0.02
SNX29-207ENST00000568949 SEPT2Q15019 361 aa15.18■□□□□ 0.02
SNX29-207ENST00000568949 FAM47AQ5JRC9 791 aa15.18■□□□□ 0.02
SNX29-207ENST00000568949 MAGEB6Q8N7X4 407 aa15.18■□□□□ 0.02
SNX29-207ENST00000568949 SSH3Q8TE77 659 aa15.18■□□□□ 0.02
SNX29-207ENST00000568949 DBNLQ9UJU6 430 aaKnown RBP15.18■□□□□ 0.02
SNX29-207ENST00000568949 A0A1W2PRG0 241 aa15.17■□□□□ 0.02
SNX29-207ENST00000568949 CLTBP09497 229 aa15.17■□□□□ 0.02
SNX29-207ENST00000568949 ITGB8P26012 769 aa15.17■□□□□ 0.02
SNX29-207ENST00000568949 DSG3P32926 999 aa15.17■□□□□ 0.02
SNX29-207ENST00000568949 MAP3K12Q12852 859 aa15.17■□□□□ 0.02
SNX29-207ENST00000568949 TJAP1Q5JTD0 557 aa15.17■□□□□ 0.02
SNX29-207ENST00000568949 PRAMEF19Q5SWL8 479 aa15.17■□□□□ 0.02
SNX29-207ENST00000568949 MAML3Q96JK9 1138 aa15.17■□□□□ 0.02
SNX29-207ENST00000568949 TANGO6Q9C0B7 1094 aa15.17■□□□□ 0.02
SNX29-207ENST00000568949 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.16■□□□□ 0.02
SNX29-207ENST00000568949 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.16■□□□□ 0.02
SNX29-207ENST00000568949 SURF6O75683 361 aaKnown RBP15.16■□□□□ 0.02
SNX29-207ENST00000568949 POLR3DP05423 398 aaPredicted RBP15.16■□□□□ 0.02
SNX29-207ENST00000568949 RARBP10826 455 aa15.16■□□□□ 0.02
SNX29-207ENST00000568949 FCER1AP12319 257 aa15.16■□□□□ 0.02
SNX29-207ENST00000568949 RAG1P15918 1043 aa15.16■□□□□ 0.02
SNX29-207ENST00000568949 EPHB4P54760 987 aa15.16■□□□□ 0.02
SNX29-207ENST00000568949 ATP8B2P98198 1209 aa15.16■□□□□ 0.02
SNX29-207ENST00000568949 RNF180Q86T96 592 aa15.16■□□□□ 0.02
SNX29-207ENST00000568949 NCAPG2Q86XI2 1143 aa15.16■□□□□ 0.02
SNX29-207ENST00000568949 RIOK1Q9BRS2 568 aaKnown RBP15.16■□□□□ 0.02
SNX29-207ENST00000568949 XPNPEP3Q9NQH7 507 aa15.16■□□□□ 0.02
SNX29-207ENST00000568949 NOP58Q9Y2X3 529 aaKnown RBP15.16■□□□□ 0.02
SNX29-207ENST00000568949 SPTBN5Q9NRC6 3674 aaKnown RBP15.15■□□□□ 0.02
SNX29-207ENST00000568949 SLC25A27O95847 323 aa15.15■□□□□ 0.02
SNX29-207ENST00000568949 FPGSQ05932 587 aa15.15■□□□□ 0.02
SNX29-207ENST00000568949 PLS1Q14651 629 aa15.15■□□□□ 0.02
SNX29-207ENST00000568949 GRIN2CQ14957 1233 aa15.15■□□□□ 0.02
SNX29-207ENST00000568949 CCDC8Q9H0W5 538 aaPredicted RBP15.15■□□□□ 0.02
SNX29-207ENST00000568949 TLR7Q9NYK1 1049 aaKnown RBP15.15■□□□□ 0.02
SNX29-207ENST00000568949 MYO9BQ13459 2157 aa15.15■□□□□ 0.02
SNX29-207ENST00000568949 PRUNE2Q8WUY3 3088 aa15.14■□□□□ 0.01
SNX29-207ENST00000568949 ROBO3Q96MS0 1386 aa15.14■□□□□ 0.01
SNX29-207ENST00000568949 NCOR1O75376 2440 aa15.14■□□□□ 0.01
SNX29-207ENST00000568949 TNFRSF10AO00220 468 aa15.14■□□□□ 0.01
SNX29-207ENST00000568949 MPHOSPH10O00566 681 aaKnown RBP15.14■□□□□ 0.01
SNX29-207ENST00000568949 DNAJB2P25686 324 aa15.14■□□□□ 0.01
SNX29-207ENST00000568949 TMEM179Q6ZVK1 233 aa15.14■□□□□ 0.01
SNX29-207ENST00000568949 EAF2Q96CJ1 260 aaPredicted RBP15.14■□□□□ 0.01
SNX29-207ENST00000568949 TOX2Q96NM4 488 aa15.14■□□□□ 0.01
SNX29-207ENST00000568949 TNNQ9UQP3 1299 aa15.14■□□□□ 0.01
SNX29-207ENST00000568949 DIS3Q9Y2L1 958 aaKnown RBP15.14■□□□□ 0.01
SNX29-207ENST00000568949 NAV1Q8NEY1 1877 aa15.14■□□□□ 0.01
SNX29-207ENST00000568949 EYSQ5T1H1 3165 aa15.13■□□□□ 0.01
SNX29-207ENST00000568949 A0A1W2PQ45 241 aaPredicted RBP15.13■□□□□ 0.01
SNX29-207ENST00000568949 A0A1W2PQY0 241 aa15.13■□□□□ 0.01
SNX29-207ENST00000568949 PQBP1O60828 265 aaKnown RBP15.13■□□□□ 0.01
SNX29-207ENST00000568949 BCAR3O75815 825 aa15.13■□□□□ 0.01
SNX29-207ENST00000568949 FLOT1O75955 427 aa15.13■□□□□ 0.01
SNX29-207ENST00000568949 PGK1P00558 417 aa15.13■□□□□ 0.01
SNX29-207ENST00000568949 KIAA1755Q5JYT7 1200 aa15.13■□□□□ 0.01
SNX29-207ENST00000568949 ANKRD33Q7Z3H0 272 aa15.13■□□□□ 0.01
SNX29-207ENST00000568949 USP38Q8NB14 1042 aa15.13■□□□□ 0.01
SNX29-207ENST00000568949 CLUAP1Q96AJ1 413 aa15.13■□□□□ 0.01
SNX29-207ENST00000568949 ATG4CQ96DT6 458 aa15.13■□□□□ 0.01
SNX29-207ENST00000568949 TSEN34Q9BSV6 310 aaKnown RBP15.13■□□□□ 0.01
SNX29-207ENST00000568949 CRNKL1Q9BZJ0 848 aaKnown RBP15.13■□□□□ 0.01
SNX29-207ENST00000568949 ZNF576Q9H609 170 aa15.13■□□□□ 0.01
SNX29-207ENST00000568949 ANTXR1Q9H6X2 564 aa15.13■□□□□ 0.01
SNX29-207ENST00000568949 TMEM39AQ9NV64 488 aa15.13■□□□□ 0.01
SNX29-207ENST00000568949 MCM9Q9NXL9 1143 aa15.13■□□□□ 0.01
SNX29-207ENST00000568949 TMX2Q9Y320 296 aa15.13■□□□□ 0.01
SNX29-207ENST00000568949 PARP14Q460N5 1801 aa15.13■□□□□ 0.01
SNX29-207ENST00000568949 MAGEB6P1A0A0J9YX57 407 aa15.12■□□□□ 0.01
SNX29-207ENST00000568949 AKR1A1P14550 325 aa15.12■□□□□ 0.01
SNX29-207ENST00000568949 COL9A1P20849 921 aa15.12■□□□□ 0.01
SNX29-207ENST00000568949 FRAT1Q92837 279 aaPredicted RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms