RNA–Protein interactions for RNA: ENST00000568820.5

LYRM1-210, Transcript of LYR motif containing 1, humanhuman

TSL 1 (best)

Gene LYRM1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-210ENST00000568820 RCOR1Q9UKL0 485 aa12.99□□□□□ -0.33
LYRM1-210ENST00000568820 SUGT1Q9Y2Z0 365 aa12.99□□□□□ -0.33
LYRM1-210ENST00000568820 TACC3Q9Y6A5 838 aa12.99□□□□□ -0.33
LYRM1-210ENST00000568820 TCHHQ07283 1943 aa12.98□□□□□ -0.33
LYRM1-210ENST00000568820 CCDC88AQ3V6T2 1871 aa12.98□□□□□ -0.33
LYRM1-210ENST00000568820 RGPD3A6NKT7 1758 aaPredicted RBP12.98□□□□□ -0.33
LYRM1-210ENST00000568820 RGPD4Q7Z3J3 1758 aa12.98□□□□□ -0.33
LYRM1-210ENST00000568820 MROH7-TTC4A0A0A0MT08 1334 aa12.98□□□□□ -0.33
LYRM1-210ENST00000568820 TNKSO95271 1327 aa12.98□□□□□ -0.33
LYRM1-210ENST00000568820 CDC27P30260 824 aa12.98□□□□□ -0.33
LYRM1-210ENST00000568820 CCDC178Q5BJE1 867 aa12.98□□□□□ -0.33
LYRM1-210ENST00000568820 IFIT1BQ5T764 474 aaKnown RBP12.98□□□□□ -0.33
LYRM1-210ENST00000568820 CATIPQ7Z7H3 387 aa12.98□□□□□ -0.33
LYRM1-210ENST00000568820 RAB11FIP4Q86YS3 637 aa12.98□□□□□ -0.33
LYRM1-210ENST00000568820 ZNF654Q8IZM8 581 aa12.98□□□□□ -0.33
LYRM1-210ENST00000568820 ZNF287Q9HBT7 754 aa12.98□□□□□ -0.33
LYRM1-210ENST00000568820 JAG2Q9Y219 1238 aa12.98□□□□□ -0.33
LYRM1-210ENST00000568820 CHD4Q14839 1912 aa12.98□□□□□ -0.33
LYRM1-210ENST00000568820 FMNL1O95466 1100 aaPredicted RBP12.97□□□□□ -0.33
LYRM1-210ENST00000568820 GUCY1B3Q02153 619 aa12.97□□□□□ -0.33
LYRM1-210ENST00000568820 SEC23AQ15436 765 aa12.97□□□□□ -0.33
LYRM1-210ENST00000568820 NTRK3Q16288 839 aa12.97□□□□□ -0.33
LYRM1-210ENST00000568820 STK11IPQ8N1F8 1099 aa12.97□□□□□ -0.33
LYRM1-210ENST00000568820 MPNDQ8N594 471 aa12.97□□□□□ -0.33
LYRM1-210ENST00000568820 FANCBQ8NB91 859 aa12.97□□□□□ -0.33
LYRM1-210ENST00000568820 NKX2-3Q8TAU0 364 aa12.97□□□□□ -0.33
LYRM1-210ENST00000568820 BICD2Q8TD16 824 aa12.97□□□□□ -0.33
LYRM1-210ENST00000568820 ZKSCAN3Q9BRR0 538 aa12.97□□□□□ -0.33
LYRM1-210ENST00000568820 ZC3H12CQ9C0D7 883 aaKnown RBP12.97□□□□□ -0.33
LYRM1-210ENST00000568820 SENP2Q9HC62 589 aa12.97□□□□□ -0.33
LYRM1-210ENST00000568820 RBM28Q9NW13 759 aaKnown RBP12.97□□□□□ -0.33
LYRM1-210ENST00000568820 MCM9Q9NXL9 1143 aa12.97□□□□□ -0.33
LYRM1-210ENST00000568820 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.97□□□□□ -0.33
LYRM1-210ENST00000568820 KIAA1551Q9HCM1 1747 aa12.97□□□□□ -0.33
LYRM1-210ENST00000568820 NRXN2Q9P2S2 1712 aa12.97□□□□□ -0.33
LYRM1-210ENST00000568820 FAM205AQ6ZU69 1335 aa12.96□□□□□ -0.33
LYRM1-210ENST00000568820 PPFIA3O75145 1194 aa12.96□□□□□ -0.33
LYRM1-210ENST00000568820 DDAH1O94760 285 aa12.96□□□□□ -0.33
LYRM1-210ENST00000568820 RXRAP19793 462 aa12.96□□□□□ -0.33
LYRM1-210ENST00000568820 CCDC173Q0VFZ6 552 aa12.96□□□□□ -0.33
LYRM1-210ENST00000568820 GNL2Q13823 731 aaKnown RBP12.96□□□□□ -0.33
LYRM1-210ENST00000568820 MFSD14BQ5SR56 506 aa12.96□□□□□ -0.33
LYRM1-210ENST00000568820 DPP8Q6V1X1 898 aaPredicted RBP12.96□□□□□ -0.33
LYRM1-210ENST00000568820 CCDC144CPQ8IYA2 1237 aa12.96□□□□□ -0.33
LYRM1-210ENST00000568820 HLA-CQ95604 372 aa12.96□□□□□ -0.33
LYRM1-210ENST00000568820 EYA3Q99504 573 aa12.96□□□□□ -0.33
LYRM1-210ENST00000568820 SLC26A6Q9BXS9 759 aa12.96□□□□□ -0.33
LYRM1-210ENST00000568820 PANK2Q9BZ23 570 aa12.96□□□□□ -0.33
LYRM1-210ENST00000568820 FAM117AQ9C073 453 aa12.96□□□□□ -0.33
LYRM1-210ENST00000568820 RTEL1Q9NZ71 1219 aa12.96□□□□□ -0.33
LYRM1-210ENST00000568820 LRRC37AA6NMS7 1700 aa12.96□□□□□ -0.34
LYRM1-210ENST00000568820 DEXIO95424 95 aa12.96□□□□□ -0.34
LYRM1-210ENST00000568820 XBP1P17861 261 aa12.96□□□□□ -0.34
LYRM1-210ENST00000568820 AKAP17AQ02040 695 aaKnown RBP12.96□□□□□ -0.34
LYRM1-210ENST00000568820 SAFBQ15424 915 aaKnown RBP eCLIP12.96□□□□□ -0.34
LYRM1-210ENST00000568820 C12orf60Q5U649 245 aa12.96□□□□□ -0.34
LYRM1-210ENST00000568820 ENAHQ8N8S7 591 aaPredicted RBP12.96□□□□□ -0.34
LYRM1-210ENST00000568820 KCNG4Q8TDN1 519 aa12.96□□□□□ -0.34
LYRM1-210ENST00000568820 NUP133Q8WUM0 1156 aa12.96□□□□□ -0.34
LYRM1-210ENST00000568820 THAP11Q96EK4 314 aa12.96□□□□□ -0.34
LYRM1-210ENST00000568820 GPR101Q96P66 508 aaPredicted RBP12.96□□□□□ -0.34
LYRM1-210ENST00000568820 MYL10Q9BUA6 226 aa12.96□□□□□ -0.34
LYRM1-210ENST00000568820 RBSNQ9H1K0 784 aa12.96□□□□□ -0.34
LYRM1-210ENST00000568820 NUP62CLQ9H1M0 184 aa12.96□□□□□ -0.34
LYRM1-210ENST00000568820 POLR3EQ9NVU0 708 aa12.96□□□□□ -0.34
LYRM1-210ENST00000568820 STK32BQ9NY57 414 aa12.96□□□□□ -0.34
LYRM1-210ENST00000568820 CYP2D7A0A087X1C5 515 aa12.95□□□□□ -0.34
LYRM1-210ENST00000568820 GPR75-ASB3A0A0A6YYF3 556 aa12.95□□□□□ -0.34
LYRM1-210ENST00000568820 TSPY2A6NKD2 308 aa12.95□□□□□ -0.34
LYRM1-210ENST00000568820 YEATS4O95619 227 aa12.95□□□□□ -0.34
LYRM1-210ENST00000568820 KIF23Q02241 960 aaPredicted RBP12.95□□□□□ -0.34
LYRM1-210ENST00000568820 KRT40Q6A162 431 aa12.95□□□□□ -0.34
LYRM1-210ENST00000568820 SH3RF3Q8TEJ3 882 aaPredicted RBP12.95□□□□□ -0.34
LYRM1-210ENST00000568820 PHKBQ93100 1093 aa12.95□□□□□ -0.34
LYRM1-210ENST00000568820 USP28Q96RU2 1077 aa12.95□□□□□ -0.34
LYRM1-210ENST00000568820 RTFDC1Q9BY42 306 aaPredicted RBP12.95□□□□□ -0.34
LYRM1-210ENST00000568820 MKRN1Q9UHC7 482 aaKnown RBP12.95□□□□□ -0.34
LYRM1-210ENST00000568820 MOXD2PA6NHM9 499 aa12.94□□□□□ -0.34
LYRM1-210ENST00000568820 H0YIN7 160 aa12.94□□□□□ -0.34
LYRM1-210ENST00000568820 TLL1O43897 1013 aa12.94□□□□□ -0.34
LYRM1-210ENST00000568820 GJA5P36382 358 aa12.94□□□□□ -0.34
LYRM1-210ENST00000568820 BTDP43251 543 aa12.94□□□□□ -0.34
LYRM1-210ENST00000568820 CEBPZQ03701 1054 aaKnown RBP12.94□□□□□ -0.34
LYRM1-210ENST00000568820 SF3A1Q15459 793 aaKnown RBP12.94□□□□□ -0.34
LYRM1-210ENST00000568820 SLC15A2Q16348 729 aa12.94□□□□□ -0.34
LYRM1-210ENST00000568820 MAP3K11Q16584 847 aa12.94□□□□□ -0.34
LYRM1-210ENST00000568820 MYSM1Q5VVJ2 828 aa12.94□□□□□ -0.34
LYRM1-210ENST00000568820 STYK1Q6J9G0 422 aa12.94□□□□□ -0.34
LYRM1-210ENST00000568820 CRACR2BQ8N4Y2 399 aaPredicted RBP12.94□□□□□ -0.34
LYRM1-210ENST00000568820 RNF26Q9BY78 433 aaPredicted RBP12.94□□□□□ -0.34
LYRM1-210ENST00000568820 ROBO3Q96MS0 1386 aa12.94□□□□□ -0.34
LYRM1-210ENST00000568820 PRDM1O75626 825 aa12.93□□□□□ -0.34
LYRM1-210ENST00000568820 POLR3DP05423 398 aaPredicted RBP12.93□□□□□ -0.34
LYRM1-210ENST00000568820 CCDC192P0DO97 292 aa12.93□□□□□ -0.34
LYRM1-210ENST00000568820 ME1P48163 572 aa12.93□□□□□ -0.34
LYRM1-210ENST00000568820 STK38Q15208 465 aa12.93□□□□□ -0.34
LYRM1-210ENST00000568820 UVSSAQ2YD98 709 aa12.93□□□□□ -0.34
LYRM1-210ENST00000568820 Q3C1V9 767 aa12.93□□□□□ -0.34
LYRM1-210ENST00000568820 OTUD7BQ6GQQ9 843 aa12.93□□□□□ -0.34
LYRM1-210ENST00000568820 CCDC73Q6ZRK6 1079 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms