RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-207ENST00000568782 GABRQQ9UN88 632 aa12.35□□□□□ -0.43
UBR1-207ENST00000568782 POTEFA5A3E0 1075 aa12.34□□□□□ -0.43
UBR1-207ENST00000568782 HIP1O00291 1037 aa12.34□□□□□ -0.43
UBR1-207ENST00000568782 WDR46O15213 610 aaKnown RBP12.34□□□□□ -0.43
UBR1-207ENST00000568782 TSPY3P0CV98 308 aa12.34□□□□□ -0.43
UBR1-207ENST00000568782 TSPY8P0CW00 308 aa12.34□□□□□ -0.43
UBR1-207ENST00000568782 EEF2P13639 858 aaKnown RBP12.34□□□□□ -0.43
UBR1-207ENST00000568782 NUCB1Q02818 461 aa12.34□□□□□ -0.43
UBR1-207ENST00000568782 MCMDC2Q4G0Z9 681 aa12.34□□□□□ -0.43
UBR1-207ENST00000568782 SAMD1Q6SPF0 538 aaPredicted RBP12.34□□□□□ -0.43
UBR1-207ENST00000568782 MB21D1Q8N884 522 aa12.34□□□□□ -0.43
UBR1-207ENST00000568782 VCPKMTQ9H867 229 aa12.34□□□□□ -0.43
UBR1-207ENST00000568782 RBPJLQ9UBG7 517 aa12.34□□□□□ -0.43
UBR1-207ENST00000568782 TMX2Q9Y320 296 aa12.34□□□□□ -0.43
UBR1-207ENST00000568782 CTDP1Q9Y5B0 961 aaPredicted RBP12.34□□□□□ -0.43
UBR1-207ENST00000568782 SALL3Q9BXA9 1300 aa12.34□□□□□ -0.43
UBR1-207ENST00000568782 FLOT1O75955 427 aa12.33□□□□□ -0.44
UBR1-207ENST00000568782 IGHDP01880 384 aa12.33□□□□□ -0.44
UBR1-207ENST00000568782 CCL5P13501 91 aa12.33□□□□□ -0.44
UBR1-207ENST00000568782 EN2P19622 333 aaPredicted RBP12.33□□□□□ -0.44
UBR1-207ENST00000568782 RGS2P41220 211 aa12.33□□□□□ -0.44
UBR1-207ENST00000568782 EVX2Q03828 476 aa12.33□□□□□ -0.44
UBR1-207ENST00000568782 PLS1Q14651 629 aa12.33□□□□□ -0.44
UBR1-207ENST00000568782 LBX2Q6XYB7 198 aa12.33□□□□□ -0.44
UBR1-207ENST00000568782 PLEKHH3Q7Z736 793 aa12.33□□□□□ -0.44
UBR1-207ENST00000568782 SPICE1Q8N0Z3 855 aa12.33□□□□□ -0.44
UBR1-207ENST00000568782 SEC62Q99442 399 aaKnown RBP12.33□□□□□ -0.44
UBR1-207ENST00000568782 SLC5A4Q9NY91 659 aa12.33□□□□□ -0.44
UBR1-207ENST00000568782 CENPFP49454 3210 aa12.32□□□□□ -0.44
UBR1-207ENST00000568782 A0A1W2PRG0 241 aa12.32□□□□□ -0.44
UBR1-207ENST00000568782 HMGCRP04035 888 aa12.32□□□□□ -0.44
UBR1-207ENST00000568782 INHAP05111 366 aa12.32□□□□□ -0.44
UBR1-207ENST00000568782 GJB1P08034 283 aa12.32□□□□□ -0.44
UBR1-207ENST00000568782 ELNP15502 786 aa12.32□□□□□ -0.44
UBR1-207ENST00000568782 CYP2B6P20813 491 aa12.32□□□□□ -0.44
UBR1-207ENST00000568782 PPARAQ07869 468 aa12.32□□□□□ -0.44
UBR1-207ENST00000568782 GPR142Q7Z601 462 aa12.32□□□□□ -0.44
UBR1-207ENST00000568782 TXNRD2Q9NNW7 524 aa12.32□□□□□ -0.44
UBR1-207ENST00000568782 TOMM22Q9NS69 142 aa12.32□□□□□ -0.44
UBR1-207ENST00000568782 DIAPH3Q9NSV4 1193 aa12.32□□□□□ -0.44
UBR1-207ENST00000568782 ROBO3Q96MS0 1386 aa12.31□□□□□ -0.44
UBR1-207ENST00000568782 TSPY2A6NKD2 308 aa12.31□□□□□ -0.44
UBR1-207ENST00000568782 SPDYE16A6NNV3 312 aaPredicted RBP12.31□□□□□ -0.44
UBR1-207ENST00000568782 STRNO43815 780 aa12.31□□□□□ -0.44
UBR1-207ENST00000568782 TTLL1O95922 423 aa12.31□□□□□ -0.44
UBR1-207ENST00000568782 TFRCP02786 760 aaKnown RBP12.31□□□□□ -0.44
UBR1-207ENST00000568782 XRCC5P13010 732 aaKnown RBP12.31□□□□□ -0.44
UBR1-207ENST00000568782 RASA1P20936 1047 aa12.31□□□□□ -0.44
UBR1-207ENST00000568782 IRX6P78412 446 aaPredicted RBP12.31□□□□□ -0.44
UBR1-207ENST00000568782 MTFR1Q15390 333 aa12.31□□□□□ -0.44
UBR1-207ENST00000568782 Q3C1V9 767 aa12.31□□□□□ -0.44
UBR1-207ENST00000568782 PLEKHM2Q8IWE5 1019 aa12.31□□□□□ -0.44
UBR1-207ENST00000568782 OSBPL3Q9H4L5 887 aa12.31□□□□□ -0.44
UBR1-207ENST00000568782 EPB41L4AQ9HCS5 686 aaPredicted RBP12.31□□□□□ -0.44
UBR1-207ENST00000568782 HMX1Q9NP08 348 aaPredicted RBP12.31□□□□□ -0.44
UBR1-207ENST00000568782 NYAP2Q9P242 653 aa12.31□□□□□ -0.44
UBR1-207ENST00000568782 CLIP2Q9UDT6 1046 aa12.31□□□□□ -0.44
UBR1-207ENST00000568782 ISY1Q9ULR0 285 aaKnown RBP12.31□□□□□ -0.44
UBR1-207ENST00000568782 PRDM1O75626 825 aa12.3□□□□□ -0.44
UBR1-207ENST00000568782 ZKSCAN1P17029 563 aaPredicted RBP12.3□□□□□ -0.44
UBR1-207ENST00000568782 DSG3P32926 999 aa12.3□□□□□ -0.44
UBR1-207ENST00000568782 GJA8P48165 433 aa12.3□□□□□ -0.44
UBR1-207ENST00000568782 TFAP4Q01664 338 aa12.3□□□□□ -0.44
UBR1-207ENST00000568782 CCDC129Q6ZRS4 1044 aa12.3□□□□□ -0.44
UBR1-207ENST00000568782 DPP9Q86TI2 863 aa12.3□□□□□ -0.44
UBR1-207ENST00000568782 CLEC10AQ8IUN9 316 aa12.3□□□□□ -0.44
UBR1-207ENST00000568782 MROH8Q9H579 483 aa12.3□□□□□ -0.44
UBR1-207ENST00000568782 ZNFX1Q9P2E3 1918 aaKnown RBP12.3□□□□□ -0.44
UBR1-207ENST00000568782 SLC15A5A6NIM6 579 aa12.29□□□□□ -0.44
UBR1-207ENST00000568782 F5H6K3 240 aa12.29□□□□□ -0.44
UBR1-207ENST00000568782 RANBP6O60518 1105 aaKnown RBP12.29□□□□□ -0.44
UBR1-207ENST00000568782 SGPL1O95470 568 aa12.29□□□□□ -0.44
UBR1-207ENST00000568782 SLC25A27O95847 323 aa12.29□□□□□ -0.44
UBR1-207ENST00000568782 SDSP20132 328 aa12.29□□□□□ -0.44
UBR1-207ENST00000568782 COPB2P35606 906 aa12.29□□□□□ -0.44
UBR1-207ENST00000568782 KLRC3Q07444 240 aa12.29□□□□□ -0.44
UBR1-207ENST00000568782 MAP2K5Q13163 448 aa12.29□□□□□ -0.44
UBR1-207ENST00000568782 ALX1Q15699 326 aa12.29□□□□□ -0.44
UBR1-207ENST00000568782 MFSD14CQ5VZR4 134 aa12.29□□□□□ -0.44
UBR1-207ENST00000568782 NCAPG2Q86XI2 1143 aa12.29□□□□□ -0.44
UBR1-207ENST00000568782 NEDD1Q8NHV4 660 aa12.29□□□□□ -0.44
UBR1-207ENST00000568782 APBA2Q99767 749 aa12.29□□□□□ -0.44
UBR1-207ENST00000568782 HTATIP2Q9BUP3 242 aa12.29□□□□□ -0.44
UBR1-207ENST00000568782 SPATC1LQ9H0A9 340 aa12.29□□□□□ -0.44
UBR1-207ENST00000568782 UNC93B1Q9H1C4 597 aa12.29□□□□□ -0.44
UBR1-207ENST00000568782 PORCNQ9H237 461 aa12.29□□□□□ -0.44
UBR1-207ENST00000568782 GJD2Q9UKL4 321 aa12.29□□□□□ -0.44
UBR1-207ENST00000568782 SYNPO2Q9UMS6 1093 aa12.29□□□□□ -0.44
UBR1-207ENST00000568782 HTTP42858 3142 aa12.29□□□□□ -0.44
UBR1-207ENST00000568782 COL11A1P12107 1806 aaPredicted RBP12.29□□□□□ -0.44
UBR1-207ENST00000568782 RPTORQ8N122 1335 aa12.29□□□□□ -0.44
UBR1-207ENST00000568782 PDE4DIPQ5VU43 2346 aa12.28□□□□□ -0.44
UBR1-207ENST00000568782 PLXNB2O15031 1838 aa12.28□□□□□ -0.44
UBR1-207ENST00000568782 SMIM22K7EJ46 135 aa12.28□□□□□ -0.44
UBR1-207ENST00000568782 PEX10O60683 326 aa12.28□□□□□ -0.44
UBR1-207ENST00000568782 PTPREP23469 700 aa12.28□□□□□ -0.44
UBR1-207ENST00000568782 CTDSPL2Q05D32 466 aa12.28□□□□□ -0.44
UBR1-207ENST00000568782 IKQ13123 557 aaPredicted RBP12.28□□□□□ -0.44
UBR1-207ENST00000568782 NMIQ13287 307 aaPredicted RBP12.28□□□□□ -0.44
UBR1-207ENST00000568782 FAM83BQ5T0W9 1011 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms