RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 SHCBP1Q8NEM2 672 aa14.37□□□□□ -0.11
GTF3C1-209ENST00000568569 SSH3Q8TE77 659 aa14.37□□□□□ -0.11
GTF3C1-209ENST00000568569 MYLIPQ8WY64 445 aa14.37□□□□□ -0.11
GTF3C1-209ENST00000568569 TTYH1Q9H313 450 aaPredicted RBP14.37□□□□□ -0.11
GTF3C1-209ENST00000568569 TMEM265A0A087WTH1 108 aa14.36□□□□□ -0.11
GTF3C1-209ENST00000568569 FOSL2P15408 326 aa14.36□□□□□ -0.11
GTF3C1-209ENST00000568569 ERCC3P19447 782 aa14.36□□□□□ -0.11
GTF3C1-209ENST00000568569 GUCY1A2P33402 732 aa14.36□□□□□ -0.11
GTF3C1-209ENST00000568569 PLCD1P51178 756 aa14.36□□□□□ -0.11
GTF3C1-209ENST00000568569 MAP3K12Q12852 859 aa14.36□□□□□ -0.11
GTF3C1-209ENST00000568569 SEPT2Q15019 361 aa14.36□□□□□ -0.11
GTF3C1-209ENST00000568569 MB21D1Q8N884 522 aa14.36□□□□□ -0.11
GTF3C1-209ENST00000568569 FRAT1Q92837 279 aaPredicted RBP14.36□□□□□ -0.11
GTF3C1-209ENST00000568569 CLUAP1Q96AJ1 413 aa14.36□□□□□ -0.11
GTF3C1-209ENST00000568569 TANGO6Q9C0B7 1094 aa14.36□□□□□ -0.11
GTF3C1-209ENST00000568569 PRDM6Q9NQX0 595 aa14.36□□□□□ -0.11
GTF3C1-209ENST00000568569 TLR7Q9NYK1 1049 aaKnown RBP14.36□□□□□ -0.11
GTF3C1-209ENST00000568569 TNNQ9UQP3 1299 aa14.36□□□□□ -0.11
GTF3C1-209ENST00000568569 LTBP2Q14767 1821 aa14.36□□□□□ -0.11
GTF3C1-209ENST00000568569 CDK5RAP2Q96SN8 1893 aa14.35□□□□□ -0.11
GTF3C1-209ENST00000568569 TRIM43BA6NCK2 446 aa14.35□□□□□ -0.11
GTF3C1-209ENST00000568569 COBLO75128 1261 aa14.35□□□□□ -0.11
GTF3C1-209ENST00000568569 POLR3DP05423 398 aaPredicted RBP14.35□□□□□ -0.11
GTF3C1-209ENST00000568569 ADCYAP1R1P41586 468 aa14.35□□□□□ -0.11
GTF3C1-209ENST00000568569 LRRC41Q15345 812 aa14.35□□□□□ -0.11
GTF3C1-209ENST00000568569 FAM47AQ5JRC9 791 aa14.35□□□□□ -0.11
GTF3C1-209ENST00000568569 SH3RF1Q7Z6J0 888 aa14.35□□□□□ -0.11
GTF3C1-209ENST00000568569 ABRAQ8N0Z2 381 aa14.35□□□□□ -0.11
GTF3C1-209ENST00000568569 SYMPKQ92797 1274 aaKnown RBP14.35□□□□□ -0.11
GTF3C1-209ENST00000568569 FERMT2Q96AC1 680 aa14.35□□□□□ -0.11
GTF3C1-209ENST00000568569 TRIM43Q96BQ3 446 aaPredicted RBP14.35□□□□□ -0.11
GTF3C1-209ENST00000568569 RNPC3Q96LT9 517 aaKnown RBP14.35□□□□□ -0.11
GTF3C1-209ENST00000568569 MROH8Q9H579 483 aa14.35□□□□□ -0.11
GTF3C1-209ENST00000568569 ZNF236Q9UL36 1845 aa14.34□□□□□ -0.11
GTF3C1-209ENST00000568569 A0A1W2PRG0 241 aa14.34□□□□□ -0.11
GTF3C1-209ENST00000568569 MPHOSPH10O00566 681 aaKnown RBP14.34□□□□□ -0.11
GTF3C1-209ENST00000568569 ATP8B2P98198 1209 aa14.34□□□□□ -0.11
GTF3C1-209ENST00000568569 TLE2Q04725 743 aa14.34□□□□□ -0.11
GTF3C1-209ENST00000568569 GABPAQ06546 454 aa14.34□□□□□ -0.11
GTF3C1-209ENST00000568569 PRAMEF19Q5SWL8 479 aa14.34□□□□□ -0.11
GTF3C1-209ENST00000568569 NCAPG2Q86XI2 1143 aa14.34□□□□□ -0.11
GTF3C1-209ENST00000568569 CCDC8Q9H0W5 538 aaPredicted RBP14.34□□□□□ -0.11
GTF3C1-209ENST00000568569 NOP58Q9Y2X3 529 aaKnown RBP14.34□□□□□ -0.11
GTF3C1-209ENST00000568569 TACC3Q9Y6A5 838 aa14.34□□□□□ -0.11
GTF3C1-209ENST00000568569 BCAR3O75815 825 aa14.33□□□□□ -0.12
GTF3C1-209ENST00000568569 CLTBP09497 229 aa14.33□□□□□ -0.12
GTF3C1-209ENST00000568569 RARBP10826 455 aa14.33□□□□□ -0.12
GTF3C1-209ENST00000568569 PLS1Q14651 629 aa14.33□□□□□ -0.12
GTF3C1-209ENST00000568569 TMEM57Q8N5G2 664 aa14.33□□□□□ -0.12
GTF3C1-209ENST00000568569 EAF2Q96CJ1 260 aaPredicted RBP14.33□□□□□ -0.12
GTF3C1-209ENST00000568569 MAML3Q96JK9 1138 aa14.33□□□□□ -0.12
GTF3C1-209ENST00000568569 RIOK1Q9BRS2 568 aaKnown RBP14.33□□□□□ -0.12
GTF3C1-209ENST00000568569 ANTXR1Q9H6X2 564 aa14.33□□□□□ -0.12
GTF3C1-209ENST00000568569 NRBP1Q9UHY1 535 aa14.33□□□□□ -0.12
GTF3C1-209ENST00000568569 PHF24Q9UPV7 400 aa14.33□□□□□ -0.12
GTF3C1-209ENST00000568569 FLOT1O75955 427 aa14.32□□□□□ -0.12
GTF3C1-209ENST00000568569 FCER1AP12319 257 aa14.32□□□□□ -0.12
GTF3C1-209ENST00000568569 DSG3P32926 999 aa14.32□□□□□ -0.12
GTF3C1-209ENST00000568569 TMEM179Q6ZVK1 233 aa14.32□□□□□ -0.12
GTF3C1-209ENST00000568569 RNF180Q86T96 592 aa14.32□□□□□ -0.12
GTF3C1-209ENST00000568569 CRNKL1Q9BZJ0 848 aaKnown RBP14.32□□□□□ -0.12
GTF3C1-209ENST00000568569 XPNPEP3Q9NQH7 507 aa14.32□□□□□ -0.12
GTF3C1-209ENST00000568569 MCM9Q9NXL9 1143 aa14.32□□□□□ -0.12
GTF3C1-209ENST00000568569 RLFQ13129 1914 aa14.32□□□□□ -0.12
GTF3C1-209ENST00000568569 MYH1P12882 1939 aa14.31□□□□□ -0.12
GTF3C1-209ENST00000568569 MAGEB6P1A0A0J9YX57 407 aa14.31□□□□□ -0.12
GTF3C1-209ENST00000568569 KIAA0355O15063 1070 aa14.31□□□□□ -0.12
GTF3C1-209ENST00000568569 RAG1P15918 1043 aa14.31□□□□□ -0.12
GTF3C1-209ENST00000568569 ITGB8P26012 769 aa14.31□□□□□ -0.12
GTF3C1-209ENST00000568569 ATG4CQ96DT6 458 aa14.31□□□□□ -0.12
GTF3C1-209ENST00000568569 SH2D4AQ9H788 454 aa14.31□□□□□ -0.12
GTF3C1-209ENST00000568569 C1orf115Q9H7X2 142 aa14.31□□□□□ -0.12
GTF3C1-209ENST00000568569 ROBO3Q96MS0 1386 aa14.31□□□□□ -0.12
GTF3C1-209ENST00000568569 PQBP1O60828 265 aaKnown RBP14.3□□□□□ -0.12
GTF3C1-209ENST00000568569 SLC25A27O95847 323 aa14.3□□□□□ -0.12
GTF3C1-209ENST00000568569 EPHB4P54760 987 aa14.3□□□□□ -0.12
GTF3C1-209ENST00000568569 FPGSQ05932 587 aa14.3□□□□□ -0.12
GTF3C1-209ENST00000568569 KIAA1755Q5JYT7 1200 aa14.3□□□□□ -0.12
GTF3C1-209ENST00000568569 ZKSCAN2Q63HK3 967 aa14.3□□□□□ -0.12
GTF3C1-209ENST00000568569 SPICE1Q8N0Z3 855 aa14.3□□□□□ -0.12
GTF3C1-209ENST00000568569 ARHGEF10LQ9HCE6 1279 aa14.3□□□□□ -0.12
GTF3C1-209ENST00000568569 SWAP70Q9UH65 585 aa14.3□□□□□ -0.12
GTF3C1-209ENST00000568569 A0A1W2PQ45 241 aaPredicted RBP14.29□□□□□ -0.12
GTF3C1-209ENST00000568569 A0A1W2PQY0 241 aa14.29□□□□□ -0.12
GTF3C1-209ENST00000568569 PGK1P00558 417 aa14.29□□□□□ -0.12
GTF3C1-209ENST00000568569 DNAJB2P25686 324 aa14.29□□□□□ -0.12
GTF3C1-209ENST00000568569 EVX2Q03828 476 aa14.29□□□□□ -0.12
GTF3C1-209ENST00000568569 ICA1Q05084 483 aa14.29□□□□□ -0.12
GTF3C1-209ENST00000568569 TTF1Q15361 905 aaPredicted RBP14.29□□□□□ -0.12
GTF3C1-209ENST00000568569 TJAP1Q5JTD0 557 aa14.29□□□□□ -0.12
GTF3C1-209ENST00000568569 SLC44A5Q8NCS7 719 aa14.29□□□□□ -0.12
GTF3C1-209ENST00000568569 MMP19Q99542 508 aa14.29□□□□□ -0.12
GTF3C1-209ENST00000568569 TINF2Q9BSI4 451 aa14.29□□□□□ -0.12
GTF3C1-209ENST00000568569 VCPKMTQ9H867 229 aa14.29□□□□□ -0.12
GTF3C1-209ENST00000568569 TMEM39AQ9NV64 488 aa14.29□□□□□ -0.12
GTF3C1-209ENST00000568569 TMX2Q9Y320 296 aa14.29□□□□□ -0.12
GTF3C1-209ENST00000568569 A0A0G2JMZ2 1700 aa14.29□□□□□ -0.12
GTF3C1-209ENST00000568569 MYO5AQ9Y4I1 1855 aaKnown RBP14.29□□□□□ -0.12
GTF3C1-209ENST00000568569 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.28□□□□□ -0.12
GTF3C1-209ENST00000568569 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms