RNA–Protein interactions for RNA: ENST00000568340.5

CDH11-214, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 514 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-214ENST00000568340 GJB2P29033 226 aa12.08□□□□□ -0.48
CDH11-214ENST00000568340 PPP2R5BQ15173 497 aa12.08□□□□□ -0.48
CDH11-214ENST00000568340 DCAF15Q66K64 600 aa12.08□□□□□ -0.48
CDH11-214ENST00000568340 NFXL1Q6ZNB6 911 aa12.08□□□□□ -0.48
CDH11-214ENST00000568340 CATIPQ7Z7H3 387 aa12.08□□□□□ -0.48
CDH11-214ENST00000568340 CCDC84Q86UT8 332 aaPredicted RBP12.08□□□□□ -0.48
CDH11-214ENST00000568340 SULF1Q8IWU6 871 aa12.08□□□□□ -0.48
CDH11-214ENST00000568340 CCDC144CPQ8IYA2 1237 aa12.08□□□□□ -0.48
CDH11-214ENST00000568340 STAG2Q8N3U4 1231 aa12.08□□□□□ -0.48
CDH11-214ENST00000568340 SRBD1Q8N5C6 995 aaKnown RBP12.08□□□□□ -0.48
CDH11-214ENST00000568340 ACER1Q8TDN7 264 aa12.08□□□□□ -0.48
CDH11-214ENST00000568340 KAT14Q9H8E8 782 aa12.08□□□□□ -0.48
CDH11-214ENST00000568340 CWC22Q9HCG8 908 aaKnown RBP12.08□□□□□ -0.48
CDH11-214ENST00000568340 TMX2Q9Y320 296 aa12.08□□□□□ -0.48
CDH11-214ENST00000568340 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.08□□□□□ -0.48
CDH11-214ENST00000568340 SNCAIPQ9Y6H5 919 aa12.08□□□□□ -0.48
CDH11-214ENST00000568340 FMNL1O95466 1100 aaPredicted RBP12.07□□□□□ -0.48
CDH11-214ENST00000568340 BRD1O95696 1058 aa12.07□□□□□ -0.48
CDH11-214ENST00000568340 CALM1P0DP23 149 aa12.07□□□□□ -0.48
CDH11-214ENST00000568340 CALM2P0DP24 149 aa12.07□□□□□ -0.48
CDH11-214ENST00000568340 CALM3P0DP25 149 aa12.07□□□□□ -0.48
CDH11-214ENST00000568340 ECE1P42892 770 aa12.07□□□□□ -0.48
CDH11-214ENST00000568340 RAB3GAP1Q15042 981 aa12.07□□□□□ -0.48
CDH11-214ENST00000568340 PKN1Q16512 942 aa12.07□□□□□ -0.48
CDH11-214ENST00000568340 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.07□□□□□ -0.48
CDH11-214ENST00000568340 SCYL3Q8IZE3 742 aa12.07□□□□□ -0.48
CDH11-214ENST00000568340 DCPSQ96C86 337 aaKnown RBP12.07□□□□□ -0.48
CDH11-214ENST00000568340 RBM28Q9NW13 759 aaKnown RBP12.07□□□□□ -0.48
CDH11-214ENST00000568340 MTMR6Q9Y217 621 aa12.07□□□□□ -0.48
CDH11-214ENST00000568340 USP17L5A8MUK1 530 aa12.06□□□□□ -0.48
CDH11-214ENST00000568340 MPHOSPH10O00566 681 aaKnown RBP12.06□□□□□ -0.48
CDH11-214ENST00000568340 NDUFB10O96000 172 aa12.06□□□□□ -0.48
CDH11-214ENST00000568340 ASNSP08243 561 aa12.06□□□□□ -0.48
CDH11-214ENST00000568340 VEGFAP15692 232 aaPredicted RBP12.06□□□□□ -0.48
CDH11-214ENST00000568340 SYT1P21579 422 aa12.06□□□□□ -0.48
CDH11-214ENST00000568340 HMGN5P82970 282 aaKnown RBP12.06□□□□□ -0.48
CDH11-214ENST00000568340 ZNF543Q08ER8 600 aa12.06□□□□□ -0.48
CDH11-214ENST00000568340 PPP4R3BQ5MIZ7 849 aa12.06□□□□□ -0.48
CDH11-214ENST00000568340 USP17L2Q6R6M4 530 aa12.06□□□□□ -0.48
CDH11-214ENST00000568340 USP48Q86UV5 1035 aa12.06□□□□□ -0.48
CDH11-214ENST00000568340 LDHDQ86WU2 507 aa12.06□□□□□ -0.48
CDH11-214ENST00000568340 CMTR1Q8N1G2 835 aaKnown RBP12.06□□□□□ -0.48
CDH11-214ENST00000568340 RGS22Q8NE09 1264 aa12.06□□□□□ -0.48
CDH11-214ENST00000568340 NUP133Q8WUM0 1156 aa12.06□□□□□ -0.48
CDH11-214ENST00000568340 PHKBQ93100 1093 aa12.06□□□□□ -0.48
CDH11-214ENST00000568340 HOOK2Q96ED9 719 aa12.06□□□□□ -0.48
CDH11-214ENST00000568340 MTMR8Q96EF0 704 aa12.06□□□□□ -0.48
CDH11-214ENST00000568340 GMCL1Q96IK5 515 aa12.06□□□□□ -0.48
CDH11-214ENST00000568340 WRNIP1Q96S55 665 aa12.06□□□□□ -0.48
CDH11-214ENST00000568340 SPZ1Q9BXG8 430 aa12.06□□□□□ -0.48
CDH11-214ENST00000568340 RNF26Q9BY78 433 aaPredicted RBP12.06□□□□□ -0.48
CDH11-214ENST00000568340 TRIM34Q9BYJ4 488 aa12.06□□□□□ -0.48
CDH11-214ENST00000568340 RRAGCQ9HB90 399 aa12.06□□□□□ -0.48
CDH11-214ENST00000568340 CHMP5Q9NZZ3 219 aa12.06□□□□□ -0.48
CDH11-214ENST00000568340 CLIP2Q9UDT6 1046 aa12.06□□□□□ -0.48
CDH11-214ENST00000568340 SMC3Q9UQE7 1217 aa12.06□□□□□ -0.48
CDH11-214ENST00000568340 LOC285556D6RIA3 1793 aa12.05□□□□□ -0.48
CDH11-214ENST00000568340 PPFIA3O75145 1194 aa12.05□□□□□ -0.48
CDH11-214ENST00000568340 SMARCA1P28370 1054 aa12.05□□□□□ -0.48
CDH11-214ENST00000568340 FMR1Q06787 632 aaKnown RBP eCLIP12.05□□□□□ -0.48
CDH11-214ENST00000568340 NPY5RQ15761 445 aa12.05□□□□□ -0.48
CDH11-214ENST00000568340 SUPT20HL1Q3ZLR7 823 aa12.05□□□□□ -0.48
CDH11-214ENST00000568340 EAPPQ56P03 285 aaPredicted RBP12.05□□□□□ -0.48
CDH11-214ENST00000568340 LDLRAD1Q5T700 205 aa12.05□□□□□ -0.48
CDH11-214ENST00000568340 MAP1SQ66K74 1059 aaPredicted RBP12.05□□□□□ -0.48
CDH11-214ENST00000568340 CDC37L1Q7L3B6 337 aa12.05□□□□□ -0.48
CDH11-214ENST00000568340 DNAJC5GQ8N7S2 189 aa12.05□□□□□ -0.48
CDH11-214ENST00000568340 ZNF526Q8TF50 670 aaPredicted RBP12.05□□□□□ -0.48
CDH11-214ENST00000568340 ZKSCAN4Q969J2 545 aaPredicted RBP12.05□□□□□ -0.48
CDH11-214ENST00000568340 AIFM3Q96NN9 605 aa12.05□□□□□ -0.48
CDH11-214ENST00000568340 WDR18Q9BV38 432 aa12.05□□□□□ -0.48
CDH11-214ENST00000568340 KIAA1683Q9H0B3 1180 aa12.05□□□□□ -0.48
CDH11-214ENST00000568340 PTPRFP10586 1907 aa12.05□□□□□ -0.48
CDH11-214ENST00000568340 PARP14Q460N5 1801 aa12.04□□□□□ -0.48
CDH11-214ENST00000568340 CCDC196A0A1B0GTZ2 297 aa12.04□□□□□ -0.48
CDH11-214ENST00000568340 F5H6K3 240 aa12.04□□□□□ -0.48
CDH11-214ENST00000568340 TRAF5O00463 557 aa12.04□□□□□ -0.48
CDH11-214ENST00000568340 PRPF3O43395 683 aaKnown RBP12.04□□□□□ -0.48
CDH11-214ENST00000568340 DHX16O60231 1041 aaKnown RBP12.04□□□□□ -0.48
CDH11-214ENST00000568340 ITGBL1O95965 494 aaPredicted RBP12.04□□□□□ -0.48
CDH11-214ENST00000568340 PTPRAP18433 802 aa12.04□□□□□ -0.48
CDH11-214ENST00000568340 APLP1P51693 650 aa12.04□□□□□ -0.48
CDH11-214ENST00000568340 KLRC3Q07444 240 aa12.04□□□□□ -0.48
CDH11-214ENST00000568340 VGLL4Q14135 290 aa12.04□□□□□ -0.48
CDH11-214ENST00000568340 ASPRV1Q53RT3 343 aa12.04□□□□□ -0.48
CDH11-214ENST00000568340 BTNL9Q6UXG8 535 aa12.04□□□□□ -0.48
CDH11-214ENST00000568340 SYNE3Q6ZMZ3 975 aa12.04□□□□□ -0.48
CDH11-214ENST00000568340 CLEC17AQ6ZS10 378 aa12.04□□□□□ -0.48
CDH11-214ENST00000568340 CTCFLQ8NI51 663 aaPredicted RBP12.04□□□□□ -0.48
CDH11-214ENST00000568340 DCAF4Q8WV16 495 aa12.04□□□□□ -0.48
CDH11-214ENST00000568340 DDX11Q96FC9 970 aa12.04□□□□□ -0.48
CDH11-214ENST00000568340 C12orf42Q96LP6 360 aa12.04□□□□□ -0.48
CDH11-214ENST00000568340 CPVLQ9H3G5 476 aa12.04□□□□□ -0.48
CDH11-214ENST00000568340 RIOX1Q9H6W3 641 aa12.04□□□□□ -0.48
CDH11-214ENST00000568340 VCPKMTQ9H867 229 aa12.04□□□□□ -0.48
CDH11-214ENST00000568340 CABP5Q9NP86 173 aa12.04□□□□□ -0.48
CDH11-214ENST00000568340 GJB4Q9NTQ9 266 aa12.04□□□□□ -0.48
CDH11-214ENST00000568340 ORC3Q9UBD5 711 aaPredicted RBP12.04□□□□□ -0.48
CDH11-214ENST00000568340 RLFQ13129 1914 aa12.03□□□□□ -0.48
CDH11-214ENST00000568340 CDKL5O76039 1030 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms