RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 DCP1AQ9NPI6 582 aaPredicted RBP18.21■□□□□ 0.51
COMMD4-223ENST00000568301 HOXC10Q9NYD6 342 aa18.21■□□□□ 0.51
COMMD4-223ENST00000568301 BTBD7Q9P203 1132 aa18.21■□□□□ 0.51
COMMD4-223ENST00000568301 DDX20Q9UHI6 824 aaKnown RBP18.21■□□□□ 0.51
COMMD4-223ENST00000568301 IVNS1ABPQ9Y6Y0 642 aa18.21■□□□□ 0.51
COMMD4-223ENST00000568301 GOLIM4O00461 696 aa18.2■□□□□ 0.5
COMMD4-223ENST00000568301 RAB11FIP3O75154 756 aa18.2■□□□□ 0.5
COMMD4-223ENST00000568301 CNGA1P29973 690 aa18.2■□□□□ 0.5
COMMD4-223ENST00000568301 ATN1P54259 1190 aaPredicted RBP18.2■□□□□ 0.5
COMMD4-223ENST00000568301 GRB14Q14449 540 aa18.2■□□□□ 0.5
COMMD4-223ENST00000568301 COG2Q14746 738 aa18.2■□□□□ 0.5
COMMD4-223ENST00000568301 NPLOC4Q8TAT6 608 aa18.2■□□□□ 0.5
COMMD4-223ENST00000568301 GUCD1Q96NT3 240 aa18.2■□□□□ 0.5
COMMD4-223ENST00000568301 ZBTB40Q9NUA8 1239 aa18.2■□□□□ 0.5
COMMD4-223ENST00000568301 SWAP70Q9UH65 585 aa18.2■□□□□ 0.5
COMMD4-223ENST00000568301 A0A1W2PRG0 241 aa18.19■□□□□ 0.5
COMMD4-223ENST00000568301 STRNO43815 780 aa18.19■□□□□ 0.5
COMMD4-223ENST00000568301 MSCO60682 206 aa18.19■□□□□ 0.5
COMMD4-223ENST00000568301 CYP2C19P33261 490 aa18.19■□□□□ 0.5
COMMD4-223ENST00000568301 ATP2B2Q01814 1243 aa18.19■□□□□ 0.5
COMMD4-223ENST00000568301 SIRT2Q8IXJ6 389 aa18.19■□□□□ 0.5
COMMD4-223ENST00000568301 TRPV1Q8NER1 839 aa18.19■□□□□ 0.5
COMMD4-223ENST00000568301 LPAR1Q92633 364 aa18.19■□□□□ 0.5
COMMD4-223ENST00000568301 FAM161BQ96MY7 647 aa18.19■□□□□ 0.5
COMMD4-223ENST00000568301 LBHD1Q9BQE6 289 aaPredicted RBP18.19■□□□□ 0.5
COMMD4-223ENST00000568301 COL25A1Q9BXS0 654 aaPredicted RBP18.19■□□□□ 0.5
COMMD4-223ENST00000568301 DDX19BQ9UMR2 479 aa18.19■□□□□ 0.5
COMMD4-223ENST00000568301 MYH8P13535 1937 aa18.18■□□□□ 0.5
COMMD4-223ENST00000568301 RLFQ13129 1914 aa18.18■□□□□ 0.5
COMMD4-223ENST00000568301 APBB1O00213 710 aa18.18■□□□□ 0.5
COMMD4-223ENST00000568301 MPHOSPH10O00566 681 aaKnown RBP18.18■□□□□ 0.5
COMMD4-223ENST00000568301 FAM109BQ6ICB4 259 aaPredicted RBP18.18■□□□□ 0.5
COMMD4-223ENST00000568301 TMEM179Q6ZVK1 233 aa18.18■□□□□ 0.5
COMMD4-223ENST00000568301 LCORLQ8N3X6 602 aa18.18■□□□□ 0.5
COMMD4-223ENST00000568301 SDR42E1Q8WUS8 393 aa18.18■□□□□ 0.5
COMMD4-223ENST00000568301 DNAJC2Q99543 621 aaKnown RBP18.18■□□□□ 0.5
COMMD4-223ENST00000568301 CHMP4BQ9H444 224 aaKnown RBP18.18■□□□□ 0.5
COMMD4-223ENST00000568301 ATP8A2Q9NTI2 1148 aa18.18■□□□□ 0.5
COMMD4-223ENST00000568301 DNM1LO00429 736 aa18.17■□□□□ 0.5
COMMD4-223ENST00000568301 IGHA2P01877 340 aa18.17■□□□□ 0.5
COMMD4-223ENST00000568301 EVX2Q03828 476 aa18.17■□□□□ 0.5
COMMD4-223ENST00000568301 DIEXFQ68CQ4 756 aaKnown RBP18.17■□□□□ 0.5
COMMD4-223ENST00000568301 ATP5JP18859 108 aa18.16■□□□□ 0.5
COMMD4-223ENST00000568301 ADD2P35612 726 aa18.16■□□□□ 0.5
COMMD4-223ENST00000568301 RTP1P59025 263 aa18.16■□□□□ 0.5
COMMD4-223ENST00000568301 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.16■□□□□ 0.5
COMMD4-223ENST00000568301 MB21D1Q8N884 522 aa18.16■□□□□ 0.5
COMMD4-223ENST00000568301 SHCBP1Q8NEM2 672 aa18.16■□□□□ 0.5
COMMD4-223ENST00000568301 CCDC17Q96LX7 622 aa18.16■□□□□ 0.5
COMMD4-223ENST00000568301 MOV10L1Q9BXT6 1211 aaKnown RBP18.16■□□□□ 0.5
COMMD4-223ENST00000568301 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.16■□□□□ 0.5
COMMD4-223ENST00000568301 ARMT1Q9H993 441 aa18.16■□□□□ 0.5
COMMD4-223ENST00000568301 PAG1Q9NWQ8 432 aa18.16■□□□□ 0.5
COMMD4-223ENST00000568301 COG6Q9Y2V7 657 aa18.16■□□□□ 0.5
COMMD4-223ENST00000568301 BAZ2AQ9UIF9 1905 aaKnown RBP18.15■□□□□ 0.5
COMMD4-223ENST00000568301 CYP2D6P10635 497 aa18.15■□□□□ 0.5
COMMD4-223ENST00000568301 CYBAP13498 195 aa18.15■□□□□ 0.5
COMMD4-223ENST00000568301 GJC2Q5T442 439 aaPredicted RBP18.15■□□□□ 0.5
COMMD4-223ENST00000568301 OLFML2BQ68BL8 750 aa18.15■□□□□ 0.5
COMMD4-223ENST00000568301 DPP9Q86TI2 863 aa18.15■□□□□ 0.5
COMMD4-223ENST00000568301 SIAH1Q8IUQ4 282 aa18.15■□□□□ 0.5
COMMD4-223ENST00000568301 SLC44A5Q8NCS7 719 aa18.15■□□□□ 0.5
COMMD4-223ENST00000568301 TANGO6Q9C0B7 1094 aa18.15■□□□□ 0.5
COMMD4-223ENST00000568301 SPATC1LQ9H0A9 340 aa18.15■□□□□ 0.5
COMMD4-223ENST00000568301 BOLA2Q9H3K6 86 aa18.15■□□□□ 0.5
COMMD4-223ENST00000568301 ARHGEF10LQ9HCE6 1279 aa18.15■□□□□ 0.5
COMMD4-223ENST00000568301 TMX2Q9Y320 296 aa18.15■□□□□ 0.5
COMMD4-223ENST00000568301 LTBP2Q14767 1821 aa18.14■□□□□ 0.5
COMMD4-223ENST00000568301 ZNF236Q9UL36 1845 aa18.14■□□□□ 0.5
COMMD4-223ENST00000568301 PRKAB2O43741 272 aa18.14■□□□□ 0.49
COMMD4-223ENST00000568301 DSG3P32926 999 aa18.14■□□□□ 0.49
COMMD4-223ENST00000568301 C12orf60Q5U649 245 aa18.14■□□□□ 0.49
COMMD4-223ENST00000568301 ANO1Q5XXA6 986 aa18.14■□□□□ 0.49
COMMD4-223ENST00000568301 DYNLL2Q96FJ2 89 aa18.14■□□□□ 0.49
COMMD4-223ENST00000568301 HAUS7Q99871 368 aa18.14■□□□□ 0.49
COMMD4-223ENST00000568301 MROH8Q9H579 483 aa18.14■□□□□ 0.49
COMMD4-223ENST00000568301 SH2D4AQ9H788 454 aa18.14■□□□□ 0.49
COMMD4-223ENST00000568301 PRKAG2Q9UGJ0 569 aa18.14■□□□□ 0.49
COMMD4-223ENST00000568301 ATP11BQ9Y2G3 1177 aa18.14■□□□□ 0.49
COMMD4-223ENST00000568301 ZNFX1Q9P2E3 1918 aaKnown RBP18.13■□□□□ 0.49
COMMD4-223ENST00000568301 A0A0G2JMZ2 1700 aa18.13■□□□□ 0.49
COMMD4-223ENST00000568301 MBD4O95243 580 aa18.13■□□□□ 0.49
COMMD4-223ENST00000568301 ERCC3P19447 782 aa18.13■□□□□ 0.49
COMMD4-223ENST00000568301 ADORA2AP29274 412 aa18.13■□□□□ 0.49
COMMD4-223ENST00000568301 UBE3CQ15386 1083 aa18.13■□□□□ 0.49
COMMD4-223ENST00000568301 KIAA1755Q5JYT7 1200 aa18.13■□□□□ 0.49
COMMD4-223ENST00000568301 SLC39A5Q6ZMH5 540 aa18.13■□□□□ 0.49
COMMD4-223ENST00000568301 AMOTL1Q8IY63 956 aa18.13■□□□□ 0.49
COMMD4-223ENST00000568301 ABRAQ8N0Z2 381 aa18.13■□□□□ 0.49
COMMD4-223ENST00000568301 SLC5A4Q9NY91 659 aa18.13■□□□□ 0.49
COMMD4-223ENST00000568301 MYH7P12883 1935 aa18.13■□□□□ 0.49
COMMD4-223ENST00000568301 FLOT1O75955 427 aa18.12■□□□□ 0.49
COMMD4-223ENST00000568301 AKR1B1P15121 316 aa18.12■□□□□ 0.49
COMMD4-223ENST00000568301 CDK8P49336 464 aa18.12■□□□□ 0.49
COMMD4-223ENST00000568301 SHHQ15465 462 aa18.12■□□□□ 0.49
COMMD4-223ENST00000568301 ZNF697Q5TEC3 545 aa18.12■□□□□ 0.49
COMMD4-223ENST00000568301 ARRDC4Q8NCT1 418 aa18.12■□□□□ 0.49
COMMD4-223ENST00000568301 DDRGK1Q96HY6 314 aa18.12■□□□□ 0.49
COMMD4-223ENST00000568301 BCL11AQ9H165 835 aa18.12■□□□□ 0.49
COMMD4-223ENST00000568301 VCPKMTQ9H867 229 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms