RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 RNF141Q8WVD5 230 aa6.29□□□□□ -1.4
HERPUD1-212ENST00000567944 FBXL18Q96ME1 805 aa6.29□□□□□ -1.4
HERPUD1-212ENST00000567944 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.29□□□□□ -1.47e-9■■■□□ 16.7
HERPUD1-212ENST00000567944 FAM86C2PA6NEL3 165 aa6.28□□□□□ -1.4
HERPUD1-212ENST00000567944 ITIH2P19823 946 aa6.28□□□□□ -1.4
HERPUD1-212ENST00000567944 CASP7P55210 303 aa6.28□□□□□ -1.4
HERPUD1-212ENST00000567944 LCE1DQ5T752 114 aa6.28□□□□□ -1.4
HERPUD1-212ENST00000567944 NBPF12Q5TAG4 269 aaPredicted RBP6.28□□□□□ -1.4
HERPUD1-212ENST00000567944 TTC6Q86TZ1 520 aa6.28□□□□□ -1.4
HERPUD1-212ENST00000567944 PPFIBP1Q86W92 1011 aa6.28□□□□□ -1.4
HERPUD1-212ENST00000567944 C19orf47Q8N9M1 422 aaKnown RBP6.28□□□□□ -1.4
HERPUD1-212ENST00000567944 OR6P1Q8NGX9 317 aa6.28□□□□□ -1.4
HERPUD1-212ENST00000567944 CPLX3Q8WVH0 158 aa6.28□□□□□ -1.4
HERPUD1-212ENST00000567944 ANAPC16Q96DE5 110 aa6.28□□□□□ -1.4
HERPUD1-212ENST00000567944 SLC6A18Q96N87 628 aa6.28□□□□□ -1.4
HERPUD1-212ENST00000567944 CRBNQ96SW2 442 aa6.28□□□□□ -1.4
HERPUD1-212ENST00000567944 ZNF408Q9H9D4 720 aa6.28□□□□□ -1.4
HERPUD1-212ENST00000567944 C9IYK1 514 aa6.27□□□□□ -1.41
HERPUD1-212ENST00000567944 GRIK1P39086 918 aa6.27□□□□□ -1.41
HERPUD1-212ENST00000567944 KIR3DL1P43629 444 aa6.27□□□□□ -1.41
HERPUD1-212ENST00000567944 IFI16Q16666 785 aaKnown RBP6.27□□□□□ -1.41
HERPUD1-212ENST00000567944 MFSD4AQ8N468 514 aa6.27□□□□□ -1.41
HERPUD1-212ENST00000567944 DTWD2Q8NBA8 298 aa6.27□□□□□ -1.41
HERPUD1-212ENST00000567944 COX4I2Q96KJ9 171 aa6.27□□□□□ -1.41
HERPUD1-212ENST00000567944 ZNF512BQ96KM6 892 aaPredicted RBP6.27□□□□□ -1.41
HERPUD1-212ENST00000567944 ASPNQ9BXN1 380 aa6.27□□□□□ -1.41
HERPUD1-212ENST00000567944 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.27□□□□□ -1.41
HERPUD1-212ENST00000567944 DUSP15Q9H1R2 295 aaPredicted RBP6.27□□□□□ -1.41
HERPUD1-212ENST00000567944 SEMA3GQ9NS98 782 aa6.27□□□□□ -1.41
HERPUD1-212ENST00000567944 BSDC1Q9NW68 430 aaPredicted RBP6.27□□□□□ -1.41
HERPUD1-212ENST00000567944 SUCOQ9UBS9 1254 aaKnown RBP6.27□□□□□ -1.41
HERPUD1-212ENST00000567944 GNAT3A8MTJ3 354 aa6.26□□□□□ -1.41
HERPUD1-212ENST00000567944 WASH4PA8MWX3 477 aa6.26□□□□□ -1.41
HERPUD1-212ENST00000567944 SMAD7O15105 426 aaKnown RBP6.26□□□□□ -1.41
HERPUD1-212ENST00000567944 SHOXO15266 292 aa6.26□□□□□ -1.41
HERPUD1-212ENST00000567944 SRFP11831 508 aa6.26□□□□□ -1.41
HERPUD1-212ENST00000567944 CYP7A1P22680 504 aa6.26□□□□□ -1.41
HERPUD1-212ENST00000567944 SPRED2Q7Z698 418 aa6.26□□□□□ -1.41
HERPUD1-212ENST00000567944 BCL7CQ8WUZ0 217 aaPredicted RBP6.26□□□□□ -1.41
HERPUD1-212ENST00000567944 HSPA12BQ96MM6 686 aa6.26□□□□□ -1.41
HERPUD1-212ENST00000567944 CCDC39Q9UFE4 941 aa6.26□□□□□ -1.41
HERPUD1-212ENST00000567944 ZNF214Q9UL59 606 aaPredicted RBP6.26□□□□□ -1.41
HERPUD1-212ENST00000567944 PITPNM2Q9BZ72 1349 aa6.25□□□□□ -1.41
HERPUD1-212ENST00000567944 SHISA3A0PJX4 238 aa6.25□□□□□ -1.41
HERPUD1-212ENST00000567944 CLEC3AO75596 197 aa6.25□□□□□ -1.41
HERPUD1-212ENST00000567944 SSBP05455 408 aaKnown RBP eCLIP6.25□□□□□ -1.41
HERPUD1-212ENST00000567944 CD96P40200 585 aa6.25□□□□□ -1.41
HERPUD1-212ENST00000567944 PMS1P54277 932 aaKnown RBP6.25□□□□□ -1.41
HERPUD1-212ENST00000567944 BNIP3Q12983 259 aa6.25□□□□□ -1.41
HERPUD1-212ENST00000567944 SNW1Q13573 536 aaKnown RBP6.25□□□□□ -1.41
HERPUD1-212ENST00000567944 NBPF9Q3BBW0 867 aa6.25□□□□□ -1.41
HERPUD1-212ENST00000567944 PIWIL2Q8TC59 973 aaKnown RBP6.25□□□□□ -1.41
HERPUD1-212ENST00000567944 PRKAG3Q9UGI9 489 aa6.25□□□□□ -1.41
HERPUD1-212ENST00000567944 SNX11Q9Y5W9 270 aa6.25□□□□□ -1.41
HERPUD1-212ENST00000567944 TMEM265A0A087WTH1 108 aa6.24□□□□□ -1.41
HERPUD1-212ENST00000567944 CLCN7P51798 805 aa6.24□□□□□ -1.41
HERPUD1-212ENST00000567944 PRKCQQ04759 706 aa6.24□□□□□ -1.41
HERPUD1-212ENST00000567944 CDKAL1Q5VV42 579 aa6.24□□□□□ -1.41
HERPUD1-212ENST00000567944 ZNF574Q6ZN55 896 aaPredicted RBP6.24□□□□□ -1.41
HERPUD1-212ENST00000567944 KLHL6Q8WZ60 621 aa6.24□□□□□ -1.41
HERPUD1-212ENST00000567944 GPR62Q9BZJ7 368 aa6.24□□□□□ -1.41
HERPUD1-212ENST00000567944 VAV3Q9UKW4 847 aa6.24□□□□□ -1.41
HERPUD1-212ENST00000567944 PCDHB10Q9UN67 800 aa6.24□□□□□ -1.41
HERPUD1-212ENST00000567944 FAM155AB1AL88 458 aaPredicted RBP6.23□□□□□ -1.41
HERPUD1-212ENST00000567944 KLF4O43474 513 aa6.23□□□□□ -1.41
HERPUD1-212ENST00000567944 AOC3Q16853 763 aa6.23□□□□□ -1.41
HERPUD1-212ENST00000567944 GAB4Q2WGN9 574 aa6.23□□□□□ -1.41
HERPUD1-212ENST00000567944 AXDND1Q5T1B0 1012 aaPredicted RBP6.23□□□□□ -1.41
HERPUD1-212ENST00000567944 TDRD10Q5VZ19 366 aaKnown RBP6.23□□□□□ -1.41
HERPUD1-212ENST00000567944 ARHGAP27Q6ZUM4 889 aa6.23□□□□□ -1.41
HERPUD1-212ENST00000567944 TMC3Q7Z5M5 1100 aa6.23□□□□□ -1.41
HERPUD1-212ENST00000567944 MICAL1Q8TDZ2 1067 aa6.23□□□□□ -1.41
HERPUD1-212ENST00000567944 DHRS1Q96LJ7 313 aa6.23□□□□□ -1.41
HERPUD1-212ENST00000567944 TANGO6Q9C0B7 1094 aa6.23□□□□□ -1.41
HERPUD1-212ENST00000567944 PRDM14Q9GZV8 571 aa6.23□□□□□ -1.41
HERPUD1-212ENST00000567944 ATP13A1Q9HD20 1204 aa6.23□□□□□ -1.41
HERPUD1-212ENST00000567944 PAK6Q9NQU5 681 aaPredicted RBP6.23□□□□□ -1.41
HERPUD1-212ENST00000567944 PCMTD2Q9NV79 361 aa6.23□□□□□ -1.41
HERPUD1-212ENST00000567944 H3BS24 57 aa6.22□□□□□ -1.41
HERPUD1-212ENST00000567944 PAX4O43316 350 aa6.22□□□□□ -1.41
HERPUD1-212ENST00000567944 CBFA2T2O43439 604 aa6.22□□□□□ -1.41
HERPUD1-212ENST00000567944 CD8BP10966 210 aa6.22□□□□□ -1.41
HERPUD1-212ENST00000567944 RNF4P78317 190 aa6.22□□□□□ -1.41
HERPUD1-212ENST00000567944 AUHQ13825 339 aaKnown RBP6.22□□□□□ -1.41
HERPUD1-212ENST00000567944 PPP2R5EQ16537 467 aa6.22□□□□□ -1.41
HERPUD1-212ENST00000567944 HRASLS5Q96KN8 279 aa6.22□□□□□ -1.41
HERPUD1-212ENST00000567944 SUSD2Q9UGT4 822 aa6.22□□□□□ -1.41
HERPUD1-212ENST00000567944 YBX3P16989 372 aaKnown RBP eCLIP6.21□□□□□ -1.42
HERPUD1-212ENST00000567944 TXKP42681 527 aa6.21□□□□□ -1.42
HERPUD1-212ENST00000567944 ANKRD39Q53RE8 183 aa6.21□□□□□ -1.42
HERPUD1-212ENST00000567944 DCAF15Q66K64 600 aa6.21□□□□□ -1.42
HERPUD1-212ENST00000567944 THAP5Q7Z6K1 395 aa6.21□□□□□ -1.42
HERPUD1-212ENST00000567944 VSIG10LQ86VR7 867 aa6.21□□□□□ -1.42
HERPUD1-212ENST00000567944 CELF2-AS1Q8N7Q2 184 aa6.21□□□□□ -1.42
HERPUD1-212ENST00000567944 HNRNPLLQ8WVV9 542 aaKnown RBP6.21□□□□□ -1.42
HERPUD1-212ENST00000567944 DHX38Q92620 1227 aaKnown RBP6.21□□□□□ -1.42
HERPUD1-212ENST00000567944 UBE2FQ969M7 185 aa6.21□□□□□ -1.42
HERPUD1-212ENST00000567944 MISP3Q96FF7 219 aa6.21□□□□□ -1.42
HERPUD1-212ENST00000567944 PHAXQ9H814 394 aaKnown RBP6.21□□□□□ -1.42
HERPUD1-212ENST00000567944 FAM86C1Q9NVL1 165 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms