RNA–Protein interactions for RNA: ENST00000567909.1

GINS3-209, Transcript of GINS complex subunit 3, humanhuman

TSL 3

Gene GINS3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-209ENST00000567909 ADGRA2Q96PE1 1338 aa15.04■□□□□ -0
GINS3-209ENST00000567909 USP17L15C9J2P7 530 aa15.04■□□□□ -0
GINS3-209ENST00000567909 USP17L13C9JLJ4 530 aa15.04■□□□□ -0
GINS3-209ENST00000567909 USP17L11C9JVI0 530 aa15.04■□□□□ -0
GINS3-209ENST00000567909 USP17L18D6R9N7 530 aa15.04■□□□□ -0
GINS3-209ENST00000567909 USP17L22D6RA61 530 aa15.04■□□□□ -0
GINS3-209ENST00000567909 USP17L17D6RBQ6 530 aa15.04■□□□□ -0
GINS3-209ENST00000567909 USP17L19D6RCP7 530 aa15.04■□□□□ -0
GINS3-209ENST00000567909 USP17L20D6RJB6 530 aa15.04■□□□□ -0
GINS3-209ENST00000567909 TTLL1O95922 423 aa15.04■□□□□ -0
GINS3-209ENST00000567909 PCP11498 1178 aaKnown RBP15.04■□□□□ -0
GINS3-209ENST00000567909 HOXA7P31268 230 aaPredicted RBP15.04■□□□□ -0
GINS3-209ENST00000567909 USP17L24Q0WX57 530 aa15.04■□□□□ -0
GINS3-209ENST00000567909 C17orf99Q6UX52 265 aa15.04■□□□□ -0
GINS3-209ENST00000567909 LRRC47Q8N1G4 583 aaKnown RBP15.04■□□□□ -0
GINS3-209ENST00000567909 CD99L2Q8TCZ2 262 aa15.04■□□□□ -0
GINS3-209ENST00000567909 MAP4K1Q92918 833 aa15.04■□□□□ -0
GINS3-209ENST00000567909 TANGO6Q9C0B7 1094 aa15.04■□□□□ -0
GINS3-209ENST00000567909 LSG1Q9H089 658 aaKnown RBP15.04■□□□□ -0
GINS3-209ENST00000567909 STX8Q9UNK0 236 aa15.04■□□□□ -0
GINS3-209ENST00000567909 RBM8AQ9Y5S9 174 aaKnown RBP15.04■□□□□ -0
GINS3-209ENST00000567909 B4E1Z4 1266 aa15.03■□□□□ -0
GINS3-209ENST00000567909 SAMD1Q6SPF0 538 aaPredicted RBP15.03■□□□□ -0
GINS3-209ENST00000567909 ANKRD13CQ8N6S4 541 aa15.03■□□□□ -0
GINS3-209ENST00000567909 NKX2-3Q8TAU0 364 aa15.03■□□□□ -0
GINS3-209ENST00000567909 LPAR1Q92633 364 aa15.03■□□□□ -0
GINS3-209ENST00000567909 ESR2Q92731 530 aa15.03■□□□□ -0
GINS3-209ENST00000567909 P2RX7Q99572 595 aaKnown RBP15.03■□□□□ -0
GINS3-209ENST00000567909 IL17RBQ9NRM6 502 aa15.03■□□□□ -0
GINS3-209ENST00000567909 PARP14Q460N5 1801 aa15.03■□□□□ -0
GINS3-209ENST00000567909 KDM4AO75164 1064 aa15.02■□□□□ -0
GINS3-209ENST00000567909 CYP21A2P08686 494 aa15.02■□□□□ -0
GINS3-209ENST00000567909 BCRP11274 1271 aa15.02■□□□□ -0
GINS3-209ENST00000567909 HERVK_113P62684 666 aa15.02■□□□□ -0
GINS3-209ENST00000567909 PPP4R3BQ5MIZ7 849 aa15.02■□□□□ -0
GINS3-209ENST00000567909 CATSPERGQ6ZRH7 1159 aa15.02■□□□□ -0
GINS3-209ENST00000567909 CHMP4CQ96CF2 233 aa15.02■□□□□ -0
GINS3-209ENST00000567909 ERO1AQ96HE7 468 aa15.02■□□□□ -0
GINS3-209ENST00000567909 ZKSCAN3Q9BRR0 538 aa15.02■□□□□ -0
GINS3-209ENST00000567909 DOCK3Q8IZD9 2030 aa15.02□□□□□ -0.01
GINS3-209ENST00000567909 RLFQ13129 1914 aa15.02□□□□□ -0.01
GINS3-209ENST00000567909 F5H6K3 240 aa15.01□□□□□ -0.01
GINS3-209ENST00000567909 WDR46O15213 610 aaKnown RBP15.01□□□□□ -0.01
GINS3-209ENST00000567909 NDUFB10O96000 172 aa15.01□□□□□ -0.01
GINS3-209ENST00000567909 GCLCP48506 637 aaPredicted RBP15.01□□□□□ -0.01
GINS3-209ENST00000567909 KLRC3Q07444 240 aa15.01□□□□□ -0.01
GINS3-209ENST00000567909 KIF22Q14807 665 aa15.01□□□□□ -0.01
GINS3-209ENST00000567909 CTU1Q7Z7A3 348 aaKnown RBP15.01□□□□□ -0.01
GINS3-209ENST00000567909 MKL1Q969V6 931 aa15.01□□□□□ -0.01
GINS3-209ENST00000567909 NUP88Q99567 741 aaPredicted RBP15.01□□□□□ -0.01
GINS3-209ENST00000567909 PAGR1Q9BTK6 254 aa15.01□□□□□ -0.01
GINS3-209ENST00000567909 KRT23Q9C075 422 aa15.01□□□□□ -0.01
GINS3-209ENST00000567909 ARHGAP39Q9C0H5 1083 aa15.01□□□□□ -0.01
GINS3-209ENST00000567909 CNNM2Q9H8M5 875 aa15.01□□□□□ -0.01
GINS3-209ENST00000567909 ISY1Q9ULR0 285 aaKnown RBP15.01□□□□□ -0.01
GINS3-209ENST00000567909 MTMR7Q9Y216 660 aa15.01□□□□□ -0.01
GINS3-209ENST00000567909 TAF6LQ9Y6J9 622 aa15.01□□□□□ -0.01
GINS3-209ENST00000567909 COL11A1P12107 1806 aaPredicted RBP15.01□□□□□ -0.01
GINS3-209ENST00000567909 PEX10O60683 326 aa15□□□□□ -0.01
GINS3-209ENST00000567909 FLOT1O75955 427 aa15□□□□□ -0.01
GINS3-209ENST00000567909 LACTBP83111 547 aaPredicted RBP15□□□□□ -0.01
GINS3-209ENST00000567909 TRDNQ13061 729 aa15□□□□□ -0.01
GINS3-209ENST00000567909 FAM83BQ5T0W9 1011 aa15□□□□□ -0.01
GINS3-209ENST00000567909 TRIM17Q9Y577 477 aa15□□□□□ -0.01
GINS3-209ENST00000567909 PSMC4P43686 418 aa14.99□□□□□ -0.01
GINS3-209ENST00000567909 CAP1Q01518 475 aa14.99□□□□□ -0.01
GINS3-209ENST00000567909 COG2Q14746 738 aa14.99□□□□□ -0.01
GINS3-209ENST00000567909 FAM110CQ1W6H9 321 aa14.99□□□□□ -0.01
GINS3-209ENST00000567909 SLFN13Q68D06 897 aa14.99□□□□□ -0.01
GINS3-209ENST00000567909 IQCA1Q86XH1 822 aa14.99□□□□□ -0.01
GINS3-209ENST00000567909 TNS4Q8IZW8 715 aa14.99□□□□□ -0.01
GINS3-209ENST00000567909 GMCL1P1Q8NEA9 526 aa14.99□□□□□ -0.01
GINS3-209ENST00000567909 EFCC1Q9HA90 598 aa14.99□□□□□ -0.01
GINS3-209ENST00000567909 TCP11L1Q9NUJ3 509 aa14.99□□□□□ -0.01
GINS3-209ENST00000567909 FBXO28Q9NVF7 368 aa14.99□□□□□ -0.01
GINS3-209ENST00000567909 ZSWIM5Q9P217 1185 aa14.99□□□□□ -0.01
GINS3-209ENST00000567909 SPDYE16A6NNV3 312 aaPredicted RBP14.98□□□□□ -0.01
GINS3-209ENST00000567909 E7EWF7 191 aa14.98□□□□□ -0.01
GINS3-209ENST00000567909 SLC27A2O14975 620 aa14.98□□□□□ -0.01
GINS3-209ENST00000567909 FMNL1O95466 1100 aaPredicted RBP14.98□□□□□ -0.01
GINS3-209ENST00000567909 TOP1P11387 765 aaKnown RBP14.98□□□□□ -0.01
GINS3-209ENST00000567909 ARHGEF6Q15052 776 aa14.98□□□□□ -0.01
GINS3-209ENST00000567909 CREB3L3Q68CJ9 461 aa14.98□□□□□ -0.01
GINS3-209ENST00000567909 STOX1Q6ZVD7 989 aa14.98□□□□□ -0.01
GINS3-209ENST00000567909 OTOP1Q7RTM1 612 aa14.98□□□□□ -0.01
GINS3-209ENST00000567909 RALYLQ86SE5 291 aaKnown RBP14.98□□□□□ -0.01
GINS3-209ENST00000567909 GTF3C2Q8WUA4 911 aaPredicted RBP14.98□□□□□ -0.01
GINS3-209ENST00000567909 TMEM47Q9BQJ4 181 aa14.98□□□□□ -0.01
GINS3-209ENST00000567909 UBAC1Q9BSL1 405 aa14.98□□□□□ -0.01
GINS3-209ENST00000567909 MCOLN1Q9GZU1 580 aa14.98□□□□□ -0.01
GINS3-209ENST00000567909 TXNRD2Q9NNW7 524 aa14.98□□□□□ -0.01
GINS3-209ENST00000567909 SYNPO2Q9UMS6 1093 aa14.98□□□□□ -0.01
GINS3-209ENST00000567909 MCCP23508 829 aa14.97□□□□□ -0.01
GINS3-209ENST00000567909 CTGFP29279 349 aa14.97□□□□□ -0.01
GINS3-209ENST00000567909 NT5C2P49902 561 aa14.97□□□□□ -0.01
GINS3-209ENST00000567909 NECTIN1Q15223 517 aa14.97□□□□□ -0.01
GINS3-209ENST00000567909 RCSD1Q6JBY9 416 aa14.97□□□□□ -0.01
GINS3-209ENST00000567909 CYB5R4Q7L1T6 521 aa14.97□□□□□ -0.01
GINS3-209ENST00000567909 GPRC5AQ8NFJ5 357 aa14.97□□□□□ -0.01
GINS3-209ENST00000567909 NCOA7Q8NI08 942 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms