RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 PAK6Q9NQU5 681 aaPredicted RBP13.37□□□□□ -0.27
CDH3-206ENST00000567674 HELLSQ9NRZ9 838 aa13.37□□□□□ -0.27
CDH3-206ENST00000567674 NYAP2Q9P242 653 aa13.37□□□□□ -0.27
CDH3-206ENST00000567674 BIN2Q9UBW5 565 aaPredicted RBP13.37□□□□□ -0.27
CDH3-206ENST00000567674 GABRQQ9UN88 632 aa13.37□□□□□ -0.27
CDH3-206ENST00000567674 RPTORQ8N122 1335 aa13.37□□□□□ -0.27
CDH3-206ENST00000567674 KIAA0100Q14667 2235 aaKnown RBP13.36□□□□□ -0.27
CDH3-206ENST00000567674 SLC15A5A6NIM6 579 aa13.36□□□□□ -0.27
CDH3-206ENST00000567674 SGPL1O95470 568 aa13.36□□□□□ -0.27
CDH3-206ENST00000567674 FDX1P10109 184 aa13.36□□□□□ -0.27
CDH3-206ENST00000567674 PCP11498 1178 aaKnown RBP13.36□□□□□ -0.27
CDH3-206ENST00000567674 CCL5P13501 91 aa13.36□□□□□ -0.27
CDH3-206ENST00000567674 COPB2P35606 906 aa13.36□□□□□ -0.27
CDH3-206ENST00000567674 RGS2P41220 211 aa13.36□□□□□ -0.27
CDH3-206ENST00000567674 MFAP1P55081 439 aaKnown RBP13.36□□□□□ -0.27
CDH3-206ENST00000567674 PDE4BQ07343 736 aa13.36□□□□□ -0.27
CDH3-206ENST00000567674 ALX1Q15699 326 aa13.36□□□□□ -0.27
CDH3-206ENST00000567674 MORN1Q5T089 497 aa13.36□□□□□ -0.27
CDH3-206ENST00000567674 PLEKHH3Q7Z736 793 aa13.36□□□□□ -0.27
CDH3-206ENST00000567674 SIAH1Q8IUQ4 282 aa13.36□□□□□ -0.27
CDH3-206ENST00000567674 IFNL3Q8IZI9 196 aa13.36□□□□□ -0.27
CDH3-206ENST00000567674 ZNF444Q8N0Y2 327 aaPredicted RBP13.36□□□□□ -0.27
CDH3-206ENST00000567674 ACER1Q8TDN7 264 aa13.36□□□□□ -0.27
CDH3-206ENST00000567674 FSD1Q9BTV5 496 aa13.36□□□□□ -0.27
CDH3-206ENST00000567674 RNF208Q9H0X6 261 aa13.36□□□□□ -0.27
CDH3-206ENST00000567674 RPAP3Q9H6T3 665 aaPredicted RBP13.36□□□□□ -0.27
CDH3-206ENST00000567674 MKNK2Q9HBH9 465 aa13.36□□□□□ -0.27
CDH3-206ENST00000567674 ADAMTS5Q9UNA0 930 aa13.36□□□□□ -0.27
CDH3-206ENST00000567674 A0A1W2PRG0 241 aa13.35□□□□□ -0.27
CDH3-206ENST00000567674 SLC25A27O95847 323 aa13.35□□□□□ -0.27
CDH3-206ENST00000567674 INHAP05111 366 aa13.35□□□□□ -0.27
CDH3-206ENST00000567674 TDO2P48775 406 aa13.35□□□□□ -0.27
CDH3-206ENST00000567674 UBE2Q1Q7Z7E8 422 aa13.35□□□□□ -0.27
CDH3-206ENST00000567674 CRISPLD2Q9H0B8 497 aa13.35□□□□□ -0.27
CDH3-206ENST00000567674 MROH8Q9H579 483 aa13.35□□□□□ -0.27
CDH3-206ENST00000567674 TXNRD2Q9NNW7 524 aa13.35□□□□□ -0.27
CDH3-206ENST00000567674 HMX1Q9NP08 348 aaPredicted RBP13.35□□□□□ -0.27
CDH3-206ENST00000567674 SLC5A4Q9NY91 659 aa13.35□□□□□ -0.27
CDH3-206ENST00000567674 ANAPC4Q9UJX5 808 aa13.35□□□□□ -0.27
CDH3-206ENST00000567674 PLIN4Q96Q06 1357 aa13.34□□□□□ -0.27
CDH3-206ENST00000567674 SPDYE16A6NNV3 312 aaPredicted RBP13.34□□□□□ -0.27
CDH3-206ENST00000567674 AKR1B1P15121 316 aa13.34□□□□□ -0.27
CDH3-206ENST00000567674 RASA1P20936 1047 aa13.34□□□□□ -0.27
CDH3-206ENST00000567674 DSG3P32926 999 aa13.34□□□□□ -0.27
CDH3-206ENST00000567674 MAP2K5Q13163 448 aa13.34□□□□□ -0.27
CDH3-206ENST00000567674 SHROOM1Q2M3G4 852 aaPredicted RBP13.34□□□□□ -0.27
CDH3-206ENST00000567674 Q3C1V9 767 aa13.34□□□□□ -0.27
CDH3-206ENST00000567674 MAP3K21Q5TCX8 1036 aa13.34□□□□□ -0.27
CDH3-206ENST00000567674 GPR142Q7Z601 462 aa13.34□□□□□ -0.27
CDH3-206ENST00000567674 DYNLL2Q96FJ2 89 aa13.34□□□□□ -0.27
CDH3-206ENST00000567674 HTATIP2Q9BUP3 242 aa13.34□□□□□ -0.27
CDH3-206ENST00000567674 NR2E3Q9Y5X4 410 aa13.34□□□□□ -0.27
CDH3-206ENST00000567674 IVNS1ABPQ9Y6Y0 642 aa13.34□□□□□ -0.27
CDH3-206ENST00000567674 ZMYM6O95789 1325 aa13.34□□□□□ -0.27
CDH3-206ENST00000567674 HIP1O00291 1037 aa13.33□□□□□ -0.28
CDH3-206ENST00000567674 MSCO60682 206 aa13.33□□□□□ -0.28
CDH3-206ENST00000567674 CNMDO75829 334 aa13.33□□□□□ -0.28
CDH3-206ENST00000567674 APPP05067 770 aa13.33□□□□□ -0.28
CDH3-206ENST00000567674 CYP2D6P10635 497 aa13.33□□□□□ -0.28
CDH3-206ENST00000567674 EEF2P13639 858 aaKnown RBP13.33□□□□□ -0.28
CDH3-206ENST00000567674 PTPREP23469 700 aa13.33□□□□□ -0.28
CDH3-206ENST00000567674 NUCB1Q02818 461 aa13.33□□□□□ -0.28
CDH3-206ENST00000567674 GRB14Q14449 540 aa13.33□□□□□ -0.28
CDH3-206ENST00000567674 MTFR1Q15390 333 aa13.33□□□□□ -0.28
CDH3-206ENST00000567674 GPR153Q6NV75 609 aa13.33□□□□□ -0.28
CDH3-206ENST00000567674 CHD1LQ86WJ1 897 aa13.33□□□□□ -0.28
CDH3-206ENST00000567674 U2AF1L4Q8WU68 220 aaKnown RBP13.33□□□□□ -0.28
CDH3-206ENST00000567674 APBA2Q99767 749 aa13.33□□□□□ -0.28
CDH3-206ENST00000567674 NAPBQ9H115 298 aa13.33□□□□□ -0.28
CDH3-206ENST00000567674 BCL11AQ9H165 835 aa13.33□□□□□ -0.28
CDH3-206ENST00000567674 IGKV6D-41A0A0C4DH26 115 aa13.32□□□□□ -0.28
CDH3-206ENST00000567674 ATP2A1O14983 1001 aa13.32□□□□□ -0.28
CDH3-206ENST00000567674 FGRP09769 529 aa13.32□□□□□ -0.28
CDH3-206ENST00000567674 ZYXQ15942 572 aaKnown RBP13.32□□□□□ -0.28
CDH3-206ENST00000567674 SLFNL1Q499Z3 407 aa13.32□□□□□ -0.28
CDH3-206ENST00000567674 MCMDC2Q4G0Z9 681 aa13.32□□□□□ -0.28
CDH3-206ENST00000567674 POTEEQ6S8J3 1075 aa13.32□□□□□ -0.28
CDH3-206ENST00000567674 SLC44A5Q8NCS7 719 aa13.32□□□□□ -0.28
CDH3-206ENST00000567674 GMCL1P1Q8NEA9 526 aa13.32□□□□□ -0.28
CDH3-206ENST00000567674 NEDD1Q8NHV4 660 aa13.32□□□□□ -0.28
CDH3-206ENST00000567674 SPATC1LQ9H0A9 340 aa13.32□□□□□ -0.28
CDH3-206ENST00000567674 CWC22Q9HCG8 908 aaKnown RBP13.32□□□□□ -0.28
CDH3-206ENST00000567674 NRBP1Q9UHY1 535 aa13.32□□□□□ -0.28
CDH3-206ENST00000567674 DIS3Q9Y2L1 958 aaKnown RBP13.32□□□□□ -0.28
CDH3-206ENST00000567674 MINDY4BA8MYZ0 360 aa13.31□□□□□ -0.28
CDH3-206ENST00000567674 SOX1O00570 391 aaPredicted RBP13.31□□□□□ -0.28
CDH3-206ENST00000567674 PLA2G6O60733 806 aa13.31□□□□□ -0.28
CDH3-206ENST00000567674 TTLL1O95922 423 aa13.31□□□□□ -0.28
CDH3-206ENST00000567674 MYCP01106 439 aaPredicted RBP13.31□□□□□ -0.28
CDH3-206ENST00000567674 IGHA2P01877 340 aa13.31□□□□□ -0.28
CDH3-206ENST00000567674 ZKSCAN1P17029 563 aaPredicted RBP13.31□□□□□ -0.28
CDH3-206ENST00000567674 TSHZ3Q63HK5 1081 aa13.31□□□□□ -0.28
CDH3-206ENST00000567674 OLFML2BQ68BL8 750 aa13.31□□□□□ -0.28
CDH3-206ENST00000567674 RCSD1Q6JBY9 416 aa13.31□□□□□ -0.28
CDH3-206ENST00000567674 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.31□□□□□ -0.28
CDH3-206ENST00000567674 PRPF38AQ8NAV1 312 aaKnown RBP13.31□□□□□ -0.28
CDH3-206ENST00000567674 YTHDC1Q96MU7 727 aaKnown RBP13.31□□□□□ -0.28
CDH3-206ENST00000567674 PAGR1Q9BTK6 254 aa13.31□□□□□ -0.28
CDH3-206ENST00000567674 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.31□□□□□ -0.28
CDH3-206ENST00000567674 COL25A1Q9BXS0 654 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms