RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 HOXA7P31268 230 aaPredicted RBP11.18□□□□□ -0.62
CDH13-210ENST00000567445 IRX3P78415 501 aaPredicted RBP11.18□□□□□ -0.62
CDH13-210ENST00000567445 MAP3K12Q12852 859 aa11.18□□□□□ -0.62
CDH13-210ENST00000567445 HSP90AB4PQ58FF6 505 aa11.18□□□□□ -0.62
CDH13-210ENST00000567445 MAGEB6Q8N7X4 407 aa11.18□□□□□ -0.62
CDH13-210ENST00000567445 DPF3Q92784 378 aa11.18□□□□□ -0.62
CDH13-210ENST00000567445 HTATIP2Q9BUP3 242 aa11.18□□□□□ -0.62
CDH13-210ENST00000567445 ANTXR1Q9H6X2 564 aa11.18□□□□□ -0.62
CDH13-210ENST00000567445 ZBTB21Q9ULJ3 1066 aa11.18□□□□□ -0.62
CDH13-210ENST00000567445 TRIOBPQ9H2D6 2365 aa11.17□□□□□ -0.62
CDH13-210ENST00000567445 FARP2O94887 1054 aaPredicted RBP11.17□□□□□ -0.62
CDH13-210ENST00000567445 MS4A1P11836 297 aa11.17□□□□□ -0.62
CDH13-210ENST00000567445 USP5P45974 858 aa11.17□□□□□ -0.62
CDH13-210ENST00000567445 SHROOM1Q2M3G4 852 aaPredicted RBP11.17□□□□□ -0.62
CDH13-210ENST00000567445 PAK6Q9NQU5 681 aaPredicted RBP11.17□□□□□ -0.62
CDH13-210ENST00000567445 MORF4L1Q9UBU8 362 aa11.17□□□□□ -0.62
CDH13-210ENST00000567445 MYH1P12882 1939 aa11.16□□□□□ -0.62
CDH13-210ENST00000567445 TFRCP02786 760 aaKnown RBP11.16□□□□□ -0.62
CDH13-210ENST00000567445 HERVK_113P62684 666 aa11.16□□□□□ -0.62
CDH13-210ENST00000567445 RHPN1Q8TCX5 695 aa11.16□□□□□ -0.62
CDH13-210ENST00000567445 DEFB118Q96PH6 123 aa11.16□□□□□ -0.62
CDH13-210ENST00000567445 P2RX7Q99572 595 aaKnown RBP11.16□□□□□ -0.62
CDH13-210ENST00000567445 EPAS1Q99814 870 aa11.16□□□□□ -0.62
CDH13-210ENST00000567445 EHD4Q9H223 541 aa11.16□□□□□ -0.62
CDH13-210ENST00000567445 IL1RAPL2Q9NP60 686 aa11.16□□□□□ -0.62
CDH13-210ENST00000567445 SERPINB13Q9UIV8 391 aa11.16□□□□□ -0.62
CDH13-210ENST00000567445 GJD2Q9UKL4 321 aa11.16□□□□□ -0.62
CDH13-210ENST00000567445 BHMG1C9JSJ3 638 aaPredicted RBP11.15□□□□□ -0.62
CDH13-210ENST00000567445 GH2P01242 217 aa11.15□□□□□ -0.62
CDH13-210ENST00000567445 HMGCRP04035 888 aa11.15□□□□□ -0.62
CDH13-210ENST00000567445 FXR1P51114 621 aaKnown RBP eCLIP11.15□□□□□ -0.62
CDH13-210ENST00000567445 TTF1Q15361 905 aaPredicted RBP11.15□□□□□ -0.62
CDH13-210ENST00000567445 E2F4Q16254 413 aa11.15□□□□□ -0.62
CDH13-210ENST00000567445 TATDN1Q6P1N9 297 aa11.15□□□□□ -0.62
CDH13-210ENST00000567445 USP17L2Q6R6M4 530 aa11.15□□□□□ -0.62
CDH13-210ENST00000567445 TTC6Q86TZ1 520 aa11.15□□□□□ -0.62
CDH13-210ENST00000567445 RPAP2Q8IXW5 612 aaPredicted RBP11.15□□□□□ -0.62
CDH13-210ENST00000567445 CLASRPQ8N2M8 674 aaKnown RBP11.15□□□□□ -0.62
CDH13-210ENST00000567445 GPRC5AQ8NFJ5 357 aa11.15□□□□□ -0.62
CDH13-210ENST00000567445 MAGEB6P1A0A0J9YX57 407 aa11.14□□□□□ -0.63
CDH13-210ENST00000567445 PPP1R3GB7ZBB8 358 aa11.14□□□□□ -0.63
CDH13-210ENST00000567445 HMMRO75330 724 aa11.14□□□□□ -0.63
CDH13-210ENST00000567445 GTF3C2Q8WUA4 911 aaPredicted RBP11.14□□□□□ -0.63
CDH13-210ENST00000567445 KCTD12Q96CX2 325 aaKnown RBP11.14□□□□□ -0.63
CDH13-210ENST00000567445 RIOK1Q9BRS2 568 aaKnown RBP11.14□□□□□ -0.63
CDH13-210ENST00000567445 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.14□□□□□ -0.63
CDH13-210ENST00000567445 TXNRD2Q9NNW7 524 aa11.14□□□□□ -0.63
CDH13-210ENST00000567445 RBPJLQ9UBG7 517 aa11.14□□□□□ -0.63
CDH13-210ENST00000567445 DDX19BQ9UMR2 479 aa11.14□□□□□ -0.63
CDH13-210ENST00000567445 NR2E3Q9Y5X4 410 aa11.14□□□□□ -0.63
CDH13-210ENST00000567445 RANBP2P49792 3224 aaKnown RBP11.14□□□□□ -0.63
CDH13-210ENST00000567445 APBB1O00213 710 aa11.13□□□□□ -0.63
CDH13-210ENST00000567445 PEX10O60683 326 aa11.13□□□□□ -0.63
CDH13-210ENST00000567445 PDE6AP16499 860 aa11.13□□□□□ -0.63
CDH13-210ENST00000567445 MAPK4P31152 587 aa11.13□□□□□ -0.63
CDH13-210ENST00000567445 CERKLQ49MI3 558 aaPredicted RBP11.13□□□□□ -0.63
CDH13-210ENST00000567445 SLC9C2Q5TAH2 1124 aa11.13□□□□□ -0.63
CDH13-210ENST00000567445 KIF1BPQ96EK5 621 aa11.13□□□□□ -0.63
CDH13-210ENST00000567445 C12orf42Q96LP6 360 aa11.13□□□□□ -0.63
CDH13-210ENST00000567445 FEZ1Q99689 392 aa11.13□□□□□ -0.63
CDH13-210ENST00000567445 ZBTB40Q9NUA8 1239 aa11.13□□□□□ -0.63
CDH13-210ENST00000567445 RPTORQ8N122 1335 aa11.13□□□□□ -0.63
CDH13-210ENST00000567445 IFIT2P09913 472 aaKnown RBP11.12□□□□□ -0.63
CDH13-210ENST00000567445 XRCC5P13010 732 aaKnown RBP11.12□□□□□ -0.63
CDH13-210ENST00000567445 CYP2B6P20813 491 aa11.12□□□□□ -0.63
CDH13-210ENST00000567445 PLCD1P51178 756 aa11.12□□□□□ -0.63
CDH13-210ENST00000567445 USP14P54578 494 aa11.12□□□□□ -0.63
CDH13-210ENST00000567445 ERVK-9P63128 1117 aa11.12□□□□□ -0.63
CDH13-210ENST00000567445 ERVK-24P63145 666 aa11.12□□□□□ -0.63
CDH13-210ENST00000567445 RAB3GAP1Q15042 981 aa11.12□□□□□ -0.63
CDH13-210ENST00000567445 ABCB5Q2M3G0 1257 aa11.12□□□□□ -0.63
CDH13-210ENST00000567445 SIRT2Q8IXJ6 389 aa11.12□□□□□ -0.63
CDH13-210ENST00000567445 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.12□□□□□ -0.63
CDH13-210ENST00000567445 SOCS4Q8WXH5 440 aa11.12□□□□□ -0.63
CDH13-210ENST00000567445 TRIB2Q92519 343 aa11.12□□□□□ -0.63
CDH13-210ENST00000567445 NUDT12Q9BQG2 462 aa11.12□□□□□ -0.63
CDH13-210ENST00000567445 CRNKL1Q9BZJ0 848 aaKnown RBP11.12□□□□□ -0.63
CDH13-210ENST00000567445 HMX1Q9NP08 348 aaPredicted RBP11.12□□□□□ -0.63
CDH13-210ENST00000567445 CABP5Q9NP86 173 aa11.12□□□□□ -0.63
CDH13-210ENST00000567445 COG6Q9Y2V7 657 aa11.12□□□□□ -0.63
CDH13-210ENST00000567445 PLXNB2O15031 1838 aa11.12□□□□□ -0.63
CDH13-210ENST00000567445 DDX60LQ5H9U9 1706 aaKnown RBP11.12□□□□□ -0.63
CDH13-210ENST00000567445 SPDYE16A6NNV3 312 aaPredicted RBP11.12□□□□□ -0.63
CDH13-210ENST00000567445 USP17L15C9J2P7 530 aa11.12□□□□□ -0.63
CDH13-210ENST00000567445 USP17L13C9JLJ4 530 aa11.12□□□□□ -0.63
CDH13-210ENST00000567445 USP17L11C9JVI0 530 aa11.12□□□□□ -0.63
CDH13-210ENST00000567445 USP17L18D6R9N7 530 aa11.12□□□□□ -0.63
CDH13-210ENST00000567445 USP17L22D6RA61 530 aa11.12□□□□□ -0.63
CDH13-210ENST00000567445 USP17L17D6RBQ6 530 aa11.12□□□□□ -0.63
CDH13-210ENST00000567445 USP17L19D6RCP7 530 aa11.12□□□□□ -0.63
CDH13-210ENST00000567445 USP17L20D6RJB6 530 aa11.12□□□□□ -0.63
CDH13-210ENST00000567445 GOLIM4O00461 696 aa11.12□□□□□ -0.63
CDH13-210ENST00000567445 RAB11FIP3O75154 756 aa11.12□□□□□ -0.63
CDH13-210ENST00000567445 POLR3DP05423 398 aaPredicted RBP11.12□□□□□ -0.63
CDH13-210ENST00000567445 SHMT1P34896 483 aa11.12□□□□□ -0.63
CDH13-210ENST00000567445 USP17L24Q0WX57 530 aa11.12□□□□□ -0.63
CDH13-210ENST00000567445 TRIM32Q13049 653 aa11.12□□□□□ -0.63
CDH13-210ENST00000567445 PDE3AQ14432 1141 aa11.12□□□□□ -0.63
CDH13-210ENST00000567445 ZYXQ15942 572 aaKnown RBP11.12□□□□□ -0.63
CDH13-210ENST00000567445 Q3C1V9 767 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms