RNA–Protein interactions for RNA: ENST00000567400.1

GINS3-207, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-207ENST00000567400 HMGCRP04035 888 aa9.02□□□□□ -0.97
GINS3-207ENST00000567400 EEF2P13639 858 aaKnown RBP9.02□□□□□ -0.97
GINS3-207ENST00000567400 MAPK4P31152 587 aa9.02□□□□□ -0.97
GINS3-207ENST00000567400 UBXN2AP68543 259 aa9.02□□□□□ -0.97
GINS3-207ENST00000567400 CCL14Q16627 93 aa9.02□□□□□ -0.97
GINS3-207ENST00000567400 MORN1Q5T089 497 aa9.02□□□□□ -0.97
GINS3-207ENST00000567400 MAP3K21Q5TCX8 1036 aa9.02□□□□□ -0.97
GINS3-207ENST00000567400 SMC5Q8IY18 1101 aa9.02□□□□□ -0.97
GINS3-207ENST00000567400 GTF3C2Q8WUA4 911 aaPredicted RBP9.02□□□□□ -0.97
GINS3-207ENST00000567400 GCC1Q96CN9 775 aa9.02□□□□□ -0.97
GINS3-207ENST00000567400 DDRGK1Q96HY6 314 aa9.02□□□□□ -0.97
GINS3-207ENST00000567400 CCDC17Q96LX7 622 aa9.02□□□□□ -0.97
GINS3-207ENST00000567400 FSD1Q9BTV5 496 aa9.02□□□□□ -0.97
GINS3-207ENST00000567400 VCPKMTQ9H867 229 aa9.02□□□□□ -0.97
GINS3-207ENST00000567400 ZNF236Q9UL36 1845 aa9.02□□□□□ -0.97
GINS3-207ENST00000567400 DNAH12Q6ZR08 3092 aa9.02□□□□□ -0.97
GINS3-207ENST00000567400 COL11A1P12107 1806 aaPredicted RBP9.01□□□□□ -0.97
GINS3-207ENST00000567400 IGKV6D-41A0A0C4DH26 115 aa9.01□□□□□ -0.97
GINS3-207ENST00000567400 SGPL1O95470 568 aa9.01□□□□□ -0.97
GINS3-207ENST00000567400 IGHA2P01877 340 aa9.01□□□□□ -0.97
GINS3-207ENST00000567400 XRCC5P13010 732 aaKnown RBP9.01□□□□□ -0.97
GINS3-207ENST00000567400 GNAT2P19087 354 aa9.01□□□□□ -0.97
GINS3-207ENST00000567400 CYP2B6P20813 491 aa9.01□□□□□ -0.97
GINS3-207ENST00000567400 CCDC129Q6ZRS4 1044 aa9.01□□□□□ -0.97
GINS3-207ENST00000567400 IFNL3Q8IZI9 196 aa9.01□□□□□ -0.97
GINS3-207ENST00000567400 STK11IPQ8N1F8 1099 aa9.01□□□□□ -0.97
GINS3-207ENST00000567400 SOCS4Q8WXH5 440 aa9.01□□□□□ -0.97
GINS3-207ENST00000567400 LPAR1Q92633 364 aa9.01□□□□□ -0.97
GINS3-207ENST00000567400 NUDT12Q9BQG2 462 aa9.01□□□□□ -0.97
GINS3-207ENST00000567400 TANGO6Q9C0B7 1094 aa9.01□□□□□ -0.97
GINS3-207ENST00000567400 LNPKQ9C0E8 428 aa9.01□□□□□ -0.97
GINS3-207ENST00000567400 CRISPLD2Q9H0B8 497 aa9.01□□□□□ -0.97
GINS3-207ENST00000567400 KANSL2Q9H9L4 492 aa9.01□□□□□ -0.97
GINS3-207ENST00000567400 PLIN4Q96Q06 1357 aa9□□□□□ -0.97
GINS3-207ENST00000567400 ALPK3Q96L96 1907 aa9□□□□□ -0.97
GINS3-207ENST00000567400 A0A0D9SFI3 127 aa9□□□□□ -0.97
GINS3-207ENST00000567400 MINDY4BA8MYZ0 360 aa9□□□□□ -0.97
GINS3-207ENST00000567400 PATL2C9JE40 543 aaKnown RBP9□□□□□ -0.97
GINS3-207ENST00000567400 PRDM1O75626 825 aa9□□□□□ -0.97
GINS3-207ENST00000567400 TDO2P48775 406 aa9□□□□□ -0.97
GINS3-207ENST00000567400 MNX1P50219 401 aaPredicted RBP9□□□□□ -0.97
GINS3-207ENST00000567400 AAMPQ13685 434 aa9□□□□□ -0.97
GINS3-207ENST00000567400 GRB14Q14449 540 aa9□□□□□ -0.97
GINS3-207ENST00000567400 COG2Q14746 738 aa9□□□□□ -0.97
GINS3-207ENST00000567400 VPS53Q5VIR6 699 aa9□□□□□ -0.97
GINS3-207ENST00000567400 PLEKHH3Q7Z736 793 aa9□□□□□ -0.97
GINS3-207ENST00000567400 AMOTL1Q8IY63 956 aa9□□□□□ -0.97
GINS3-207ENST00000567400 NKX2-3Q8TAU0 364 aa9□□□□□ -0.97
GINS3-207ENST00000567400 ATG4CQ96DT6 458 aa9□□□□□ -0.97
GINS3-207ENST00000567400 FAM227BQ96M60 508 aa9□□□□□ -0.97
GINS3-207ENST00000567400 DEFB118Q96PH6 123 aa9□□□□□ -0.97
GINS3-207ENST00000567400 APBA2Q99767 749 aa9□□□□□ -0.97
GINS3-207ENST00000567400 MOV10L1Q9BXT6 1211 aaKnown RBP9□□□□□ -0.97
GINS3-207ENST00000567400 XRN2Q9H0D6 950 aaKnown RBP eCLIP9□□□□□ -0.97
GINS3-207ENST00000567400 ARHGEF10LQ9HCE6 1279 aa9□□□□□ -0.97
GINS3-207ENST00000567400 FBXO28Q9NVF7 368 aa9□□□□□ -0.97
GINS3-207ENST00000567400 FLRT1Q9NZU1 646 aa9□□□□□ -0.97
GINS3-207ENST00000567400 ADAMTS5Q9UNA0 930 aa9□□□□□ -0.97
GINS3-207ENST00000567400 TACC3Q9Y6A5 838 aa9□□□□□ -0.97
GINS3-207ENST00000567400 LAMA3Q16787 3333 aa9□□□□□ -0.97
GINS3-207ENST00000567400 MYH4Q9Y623 1939 aa8.99□□□□□ -0.97
GINS3-207ENST00000567400 FRMPD3Q5JV73 1810 aa8.99□□□□□ -0.97
GINS3-207ENST00000567400 SZT2Q5T011 3432 aa8.99□□□□□ -0.97
GINS3-207ENST00000567400 WDR46O15213 610 aaKnown RBP8.99□□□□□ -0.97
GINS3-207ENST00000567400 FLOT1O75955 427 aa8.99□□□□□ -0.97
GINS3-207ENST00000567400 FARP2O94887 1054 aaPredicted RBP8.99□□□□□ -0.97
GINS3-207ENST00000567400 APPP05067 770 aa8.99□□□□□ -0.97
GINS3-207ENST00000567400 PRKAR2AP13861 404 aaKnown RBP8.99□□□□□ -0.97
GINS3-207ENST00000567400 DSG3P32926 999 aa8.99□□□□□ -0.97
GINS3-207ENST00000567400 NUCB1Q02818 461 aa8.99□□□□□ -0.97
GINS3-207ENST00000567400 CACNB2Q08289 660 aaPredicted RBP8.99□□□□□ -0.97
GINS3-207ENST00000567400 MAP2K5Q13163 448 aa8.99□□□□□ -0.97
GINS3-207ENST00000567400 ZNF589Q86UQ0 364 aaPredicted RBP8.99□□□□□ -0.97
GINS3-207ENST00000567400 PLEKHM2Q8IWE5 1019 aa8.99□□□□□ -0.97
GINS3-207ENST00000567400 REPS2Q8NFH8 660 aa8.99□□□□□ -0.97
GINS3-207ENST00000567400 DIS3LQ8TF46 1054 aaKnown RBP8.99□□□□□ -0.97
GINS3-207ENST00000567400 EVI5LQ96CN4 794 aa8.99□□□□□ -0.97
GINS3-207ENST00000567400 NUP88Q99567 741 aaPredicted RBP8.99□□□□□ -0.97
GINS3-207ENST00000567400 SPATC1LQ9H0A9 340 aa8.99□□□□□ -0.97
GINS3-207ENST00000567400 SH2D4AQ9H788 454 aa8.99□□□□□ -0.97
GINS3-207ENST00000567400 SUPT16HQ9Y5B9 1047 aaKnown RBP8.99□□□□□ -0.97
GINS3-207ENST00000567400 RPTORQ8N122 1335 aa8.99□□□□□ -0.97
GINS3-207ENST00000567400 SLC15A5A6NIM6 579 aa8.98□□□□□ -0.97
GINS3-207ENST00000567400 VWA5AO00534 786 aa8.98□□□□□ -0.97
GINS3-207ENST00000567400 NDUFB10O96000 172 aa8.98□□□□□ -0.97
GINS3-207ENST00000567400 HOXC6P09630 235 aa8.98□□□□□ -0.97
GINS3-207ENST00000567400 ZKSCAN1P17029 563 aaPredicted RBP8.98□□□□□ -0.97
GINS3-207ENST00000567400 ERCC3P19447 782 aa8.98□□□□□ -0.97
GINS3-207ENST00000567400 PTPREP23469 700 aa8.98□□□□□ -0.97
GINS3-207ENST00000567400 RGS2P41220 211 aa8.98□□□□□ -0.97
GINS3-207ENST00000567400 CCNA1P78396 465 aa8.98□□□□□ -0.97
GINS3-207ENST00000567400 ATP2B2Q01814 1243 aa8.98□□□□□ -0.97
GINS3-207ENST00000567400 PPARAQ07869 468 aa8.98□□□□□ -0.97
GINS3-207ENST00000567400 TMEM132BQ14DG7 1078 aa8.98□□□□□ -0.97
GINS3-207ENST00000567400 LRRFIP1Q32MZ4 808 aaKnown RBP8.98□□□□□ -0.97
GINS3-207ENST00000567400 FAM83BQ5T0W9 1011 aa8.98□□□□□ -0.97
GINS3-207ENST00000567400 B4GALNT3Q6L9W6 998 aa8.98□□□□□ -0.97
GINS3-207ENST00000567400 CHD1LQ86WJ1 897 aa8.98□□□□□ -0.97
GINS3-207ENST00000567400 NPLOC4Q8TAT6 608 aa8.98□□□□□ -0.97
GINS3-207ENST00000567400 CEP95Q96GE4 821 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms