RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 HHIPL2Q6UWX4 724 aa26.72■■□□□ 1.87
LINC00543-201ENST00000567234 KRT2P35908 639 aa26.71■■□□□ 1.87
LINC00543-201ENST00000567234 TOB1P50616 345 aaPredicted RBP26.71■■□□□ 1.87
LINC00543-201ENST00000567234 GRM4Q14833 912 aa26.71■■□□□ 1.87
LINC00543-201ENST00000567234 NEDD1Q8NHV4 660 aa26.71■■□□□ 1.87
LINC00543-201ENST00000567234 TIGD1Q96MW7 591 aa26.71■■□□□ 1.87
LINC00543-201ENST00000567234 BRMS1Q9HCU9 246 aa26.71■■□□□ 1.87
LINC00543-201ENST00000567234 USP25Q9UHP3 1055 aa26.71■■□□□ 1.87
LINC00543-201ENST00000567234 TAOK2Q9UL54 1235 aa26.71■■□□□ 1.87
LINC00543-201ENST00000567234 MARCKSP29966 332 aaPredicted RBP26.7■■□□□ 1.87
LINC00543-201ENST00000567234 DOK7Q18PE1 504 aa26.7■■□□□ 1.87
LINC00543-201ENST00000567234 VPS54Q9P1Q0 977 aa26.7■■□□□ 1.87
LINC00543-201ENST00000567234 TTF2Q9UNY4 1162 aaKnown RBP26.7■■□□□ 1.87
LINC00543-201ENST00000567234 CEP131Q9UPN4 1083 aa26.7■■□□□ 1.87
LINC00543-201ENST00000567234 BRCA1P38398 1863 aaKnown RBP26.7■■□□□ 1.86
LINC00543-201ENST00000567234 SNED1Q8TER0 1413 aa26.7■■□□□ 1.86
LINC00543-201ENST00000567234 C21orf2O43822 256 aa26.69■■□□□ 1.86
LINC00543-201ENST00000567234 SYCP1Q15431 976 aa26.69■■□□□ 1.86
LINC00543-201ENST00000567234 STX1AQ16623 288 aa26.69■■□□□ 1.86
LINC00543-201ENST00000567234 TTLL6Q8N841 843 aa26.69■■□□□ 1.86
LINC00543-201ENST00000567234 SLC44A5Q8NCS7 719 aa26.69■■□□□ 1.86
LINC00543-201ENST00000567234 FBXW7Q969H0 707 aa26.69■■□□□ 1.86
LINC00543-201ENST00000567234 MRIQ9BWK5 157 aa26.69■■□□□ 1.86
LINC00543-201ENST00000567234 HPSEQ9Y251 543 aa26.69■■□□□ 1.86
LINC00543-201ENST00000567234 ZNF202O95125 648 aa26.69■■□□□ 1.86
LINC00543-201ENST00000567234 SCG2P13521 617 aa26.69■■□□□ 1.86
LINC00543-201ENST00000567234 PFKFB1P16118 471 aa26.69■■□□□ 1.86
LINC00543-201ENST00000567234 NR5A1Q13285 461 aa26.69■■□□□ 1.86
LINC00543-201ENST00000567234 PFKFB3Q16875 520 aaPredicted RBP26.69■■□□□ 1.86
LINC00543-201ENST00000567234 DNTTIP2Q5QJE6 756 aaKnown RBP26.69■■□□□ 1.86
LINC00543-201ENST00000567234 SHISA4Q96DD7 197 aa26.69■■□□□ 1.86
LINC00543-201ENST00000567234 SDF4Q9BRK5 362 aa26.69■■□□□ 1.86
LINC00543-201ENST00000567234 USP17L3A6NCW0 530 aa26.68■■□□□ 1.86
LINC00543-201ENST00000567234 USP17L4A6NCW7 530 aa26.68■■□□□ 1.86
LINC00543-201ENST00000567234 RESP18Q5W5W9 173 aa26.68■■□□□ 1.86
LINC00543-201ENST00000567234 CC2D2BQ6DHV5 1058 aa26.68■■□□□ 1.86
LINC00543-201ENST00000567234 USP17L1Q7RTZ2 530 aa26.68■■□□□ 1.86
LINC00543-201ENST00000567234 KRI1Q8N9T8 703 aaKnown RBP26.68■■□□□ 1.86
LINC00543-201ENST00000567234 CBX8Q9HC52 389 aa26.68■■□□□ 1.86
LINC00543-201ENST00000567234 BAZ2BQ9UIF8 2168 aaKnown RBP26.68■■□□□ 1.86
LINC00543-201ENST00000567234 MYH8P13535 1937 aa26.68■■□□□ 1.86
LINC00543-201ENST00000567234 OXER1Q8TDS5 423 aa26.67■■□□□ 1.86
LINC00543-201ENST00000567234 FEZ1Q99689 392 aa26.67■■□□□ 1.86
LINC00543-201ENST00000567234 LZTS2Q9BRK4 669 aa26.67■■□□□ 1.86
LINC00543-201ENST00000567234 ADCY5O95622 1261 aa26.67■■□□□ 1.86
LINC00543-201ENST00000567234 NOVP48745 357 aa26.67■■□□□ 1.86
LINC00543-201ENST00000567234 ZNF165P49910 485 aa26.67■■□□□ 1.86
LINC00543-201ENST00000567234 TGFB2P61812 414 aa26.67■■□□□ 1.86
LINC00543-201ENST00000567234 TEKT1Q969V4 418 aa26.67■■□□□ 1.86
LINC00543-201ENST00000567234 SH3GLB2Q9NR46 395 aa26.67■■□□□ 1.86
LINC00543-201ENST00000567234 ANO10Q9NW15 660 aa26.67■■□□□ 1.86
LINC00543-201ENST00000567234 STRIP1Q5VSL9 837 aa26.66■■□□□ 1.86
LINC00543-201ENST00000567234 SHC4Q6S5L8 630 aa26.66■■□□□ 1.86
LINC00543-201ENST00000567234 FAM177A1Q8N128 213 aaPredicted RBP26.66■■□□□ 1.86
LINC00543-201ENST00000567234 TMEM47Q9BQJ4 181 aa26.66■■□□□ 1.86
LINC00543-201ENST00000567234 PLIN4Q96Q06 1357 aa26.66■■□□□ 1.86
LINC00543-201ENST00000567234 ZNF646O15015 1829 aaPredicted RBP26.65■■□□□ 1.86
LINC00543-201ENST00000567234 PTPREP23469 700 aa26.65■■□□□ 1.86
LINC00543-201ENST00000567234 ZNF710Q8N1W2 664 aa26.65■■□□□ 1.86
LINC00543-201ENST00000567234 ZNF579Q8NAF0 562 aaKnown RBP26.65■■□□□ 1.86
LINC00543-201ENST00000567234 CABP5Q9NP86 173 aa26.65■■□□□ 1.86
LINC00543-201ENST00000567234 MAD2L2Q9UI95 211 aa26.65■■□□□ 1.86
LINC00543-201ENST00000567234 BMP15O95972 392 aa26.65■■□□□ 1.86
LINC00543-201ENST00000567234 SYKP43405 635 aa26.65■■□□□ 1.86
LINC00543-201ENST00000567234 HDLBPQ00341 1268 aaKnown RBP26.65■■□□□ 1.86
LINC00543-201ENST00000567234 GABPAQ06546 454 aa26.65■■□□□ 1.86
LINC00543-201ENST00000567234 NPY5RQ15761 445 aa26.65■■□□□ 1.86
LINC00543-201ENST00000567234 DNAJC25Q9H1X3 360 aa26.65■■□□□ 1.86
LINC00543-201ENST00000567234 KIAA1468Q9P260 1216 aa26.65■■□□□ 1.86
LINC00543-201ENST00000567234 MYO3BQ8WXR4 1341 aa26.64■■□□□ 1.86
LINC00543-201ENST00000567234 hCG_1642624A0A1W2PR95 340 aa26.64■■□□□ 1.85
LINC00543-201ENST00000567234 F8W031 263 aaPredicted RBP26.64■■□□□ 1.85
LINC00543-201ENST00000567234 TNFRSF25Q93038 417 aa26.64■■□□□ 1.85
LINC00543-201ENST00000567234 USP40Q9NVE5 1235 aa26.64■■□□□ 1.85
LINC00543-201ENST00000567234 STX8Q9UNK0 236 aa26.64■■□□□ 1.85
LINC00543-201ENST00000567234 PALM3A6NDB9 673 aaPredicted RBP26.63■■□□□ 1.85
LINC00543-201ENST00000567234 CALML3P27482 149 aa26.63■■□□□ 1.85
LINC00543-201ENST00000567234 LUZP1Q86V48 1076 aa26.63■■□□□ 1.85
LINC00543-201ENST00000567234 ELOA2Q8IYF1 753 aaPredicted RBP26.63■■□□□ 1.85
LINC00543-201ENST00000567234 SWAP70Q9UH65 585 aa26.63■■□□□ 1.85
LINC00543-201ENST00000567234 PCDHB6Q9Y5E3 794 aa26.63■■□□□ 1.85
LINC00543-201ENST00000567234 SCN9AQ15858 1988 aa26.63■■□□□ 1.85
LINC00543-201ENST00000567234 TRIM75PA6NK02 468 aa26.62■■□□□ 1.85
LINC00543-201ENST00000567234 TOP1P11387 765 aaKnown RBP26.62■■□□□ 1.85
LINC00543-201ENST00000567234 GRIPAP1Q4V328 841 aa26.62■■□□□ 1.85
LINC00543-201ENST00000567234 ZDHHC15Q96MV8 337 aa26.62■■□□□ 1.85
LINC00543-201ENST00000567234 DBNDD1Q9H9R9 158 aa26.62■■□□□ 1.85
LINC00543-201ENST00000567234 PIM2Q9P1W9 311 aa26.62■■□□□ 1.85
LINC00543-201ENST00000567234 FBXO2Q9UK22 296 aaPredicted RBP26.62■■□□□ 1.85
LINC00543-201ENST00000567234 SMARCA1P28370 1054 aa26.62■■□□□ 1.85
LINC00543-201ENST00000567234 APOBEC3HQ6NTF7 200 aaKnown RBP26.62■■□□□ 1.85
LINC00543-201ENST00000567234 SUPT20HQ8NEM7 779 aa26.62■■□□□ 1.85
LINC00543-201ENST00000567234 NLGN2Q8NFZ4 835 aa26.62■■□□□ 1.85
LINC00543-201ENST00000567234 SPON1Q9HCB6 807 aa26.62■■□□□ 1.85
LINC00543-201ENST00000567234 CD2APQ9Y5K6 639 aa26.62■■□□□ 1.85
LINC00543-201ENST00000567234 SRPRBQ9Y5M8 271 aaKnown RBP26.62■■□□□ 1.85
LINC00543-201ENST00000567234 GOLGA6L6A8MZA4 724 aa26.61■■□□□ 1.85
LINC00543-201ENST00000567234 TRAPPC10P48553 1259 aa26.61■■□□□ 1.85
LINC00543-201ENST00000567234 CDC42EP5Q6NZY7 148 aa26.61■■□□□ 1.85
LINC00543-201ENST00000567234 STAG2Q8N3U4 1231 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms