RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 ANKRD44Q8N8A2 993 aa6.68□□□□□ -1.34
CNOT1-211ENST00000567188 ZNF280CQ8ND82 737 aa6.68□□□□□ -1.34
CNOT1-211ENST00000567188 CELF1Q92879 486 aaKnown RBP6.68□□□□□ -1.34
CNOT1-211ENST00000567188 RAB3IPQ96QF0 476 aaPredicted RBP6.68□□□□□ -1.34
CNOT1-211ENST00000567188 RRAGCQ9HB90 399 aa6.68□□□□□ -1.34
CNOT1-211ENST00000567188 GPCPD1Q9NPB8 672 aa6.68□□□□□ -1.34
CNOT1-211ENST00000567188 ZBTB40Q9NUA8 1239 aa6.68□□□□□ -1.34
CNOT1-211ENST00000567188 NCAPD2Q15021 1401 aa6.68□□□□□ -1.34
CNOT1-211ENST00000567188 CICQ96RK0 1608 aaPredicted RBP6.68□□□□□ -1.34
CNOT1-211ENST00000567188 PHKA1P46020 1223 aa6.68□□□□□ -1.34
CNOT1-211ENST00000567188 CPLX4Q7Z7G2 160 aa6.68□□□□□ -1.34
CNOT1-211ENST00000567188 RNF10Q8N5U6 811 aaKnown RBP6.68□□□□□ -1.34
CNOT1-211ENST00000567188 TSC22D3Q99576 134 aa6.68□□□□□ -1.34
CNOT1-211ENST00000567188 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.68□□□□□ -1.34
CNOT1-211ENST00000567188 KIF24Q5T7B8 1368 aa6.68□□□□□ -1.34
CNOT1-211ENST00000567188 MROH5Q6ZUA9 1318 aa6.68□□□□□ -1.34
CNOT1-211ENST00000567188 TSPY2A6NKD2 308 aa6.68□□□□□ -1.34
CNOT1-211ENST00000567188 ZNF165P49910 485 aa6.68□□□□□ -1.34
CNOT1-211ENST00000567188 TADA2BQ86TJ2 420 aa6.68□□□□□ -1.34
CNOT1-211ENST00000567188 HOOK3Q86VS8 718 aa6.68□□□□□ -1.34
CNOT1-211ENST00000567188 OGFOD1Q8N543 542 aa6.68□□□□□ -1.34
CNOT1-211ENST00000567188 STMN2Q93045 179 aa6.68□□□□□ -1.34
CNOT1-211ENST00000567188 DDX23Q9BUQ8 820 aaKnown RBP6.68□□□□□ -1.34
CNOT1-211ENST00000567188 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.68□□□□□ -1.345e-7■■□□□ 11.5
CNOT1-211ENST00000567188 ZNF532Q9HCE3 1301 aa6.68□□□□□ -1.34
CNOT1-211ENST00000567188 EFCAB8A8MWE9 144 aa6.68□□□□□ -1.34
CNOT1-211ENST00000567188 EVCP57679 992 aa6.68□□□□□ -1.34
CNOT1-211ENST00000567188 TTC19Q6DKK2 380 aaPredicted RBP6.68□□□□□ -1.34
CNOT1-211ENST00000567188 NECAB1Q8N987 351 aa6.68□□□□□ -1.34
CNOT1-211ENST00000567188 RAB34Q9BZG1 259 aa6.68□□□□□ -1.34
CNOT1-211ENST00000567188 GOLGA6CA6NDK9 693 aa6.68□□□□□ -1.34
CNOT1-211ENST00000567188 RNF113AO15541 343 aaKnown RBP6.68□□□□□ -1.34
CNOT1-211ENST00000567188 CAMTA2O94983 1202 aa6.68□□□□□ -1.34
CNOT1-211ENST00000567188 GOLGA6DP0CG33 693 aa6.68□□□□□ -1.34
CNOT1-211ENST00000567188 TEX11Q8IYF3 940 aa6.68□□□□□ -1.34
CNOT1-211ENST00000567188 CCDC170Q8IYT3 715 aa6.68□□□□□ -1.34
CNOT1-211ENST00000567188 MASTLQ96GX5 879 aa6.68□□□□□ -1.34
CNOT1-211ENST00000567188 SMC6Q96SB8 1091 aa6.68□□□□□ -1.34
CNOT1-211ENST00000567188 ANTXR1Q9H6X2 564 aa6.68□□□□□ -1.34
CNOT1-211ENST00000567188 GOLGA6AQ9NYA3 693 aa6.68□□□□□ -1.34
CNOT1-211ENST00000567188 ZNF804BA4D1E1 1349 aa6.68□□□□□ -1.34
CNOT1-211ENST00000567188 LPXNO60711 386 aa6.68□□□□□ -1.34
CNOT1-211ENST00000567188 CIB2O75838 187 aa6.68□□□□□ -1.34
CNOT1-211ENST00000567188 TROVE2P10155 538 aaKnown RBP eCLIP6.68□□□□□ -1.34
CNOT1-211ENST00000567188 PEX19P40855 299 aa6.68□□□□□ -1.34
CNOT1-211ENST00000567188 SPTY2D1Q68D10 685 aaPredicted RBP6.68□□□□□ -1.34
CNOT1-211ENST00000567188 CTAGE1Q96RT6 745 aa6.68□□□□□ -1.34
CNOT1-211ENST00000567188 BABAM1Q9NWV8 329 aa6.68□□□□□ -1.34
CNOT1-211ENST00000567188 NWD2Q9ULI1 1742 aa6.68□□□□□ -1.34
CNOT1-211ENST00000567188 LRRC37A3O60309 1634 aa6.67□□□□□ -1.34
CNOT1-211ENST00000567188 UQCRFS1P1P0C7P4 283 aa6.67□□□□□ -1.34
CNOT1-211ENST00000567188 YY1P25490 414 aa6.67□□□□□ -1.34
CNOT1-211ENST00000567188 BTDP43251 543 aa6.67□□□□□ -1.34
CNOT1-211ENST00000567188 N4BP2L2Q92802 583 aaPredicted RBP6.67□□□□□ -1.34
CNOT1-211ENST00000567188 RNF41Q9H4P4 317 aaPredicted RBP6.67□□□□□ -1.34
CNOT1-211ENST00000567188 DENND2AQ9ULE3 1009 aa6.67□□□□□ -1.34
CNOT1-211ENST00000567188 CPDO75976 1380 aa6.67□□□□□ -1.34
CNOT1-211ENST00000567188 EYA2O00167 538 aa6.67□□□□□ -1.34
CNOT1-211ENST00000567188 HIP1RO75146 1068 aa6.67□□□□□ -1.34
CNOT1-211ENST00000567188 PPP2R3AQ06190 1150 aa6.67□□□□□ -1.34
CNOT1-211ENST00000567188 FLAD1Q8NFF5 587 aa6.67□□□□□ -1.34
CNOT1-211ENST00000567188 PDGFDQ9GZP0 370 aaPredicted RBP6.67□□□□□ -1.34
CNOT1-211ENST00000567188 ADCY9O60503 1353 aa6.67□□□□□ -1.34
CNOT1-211ENST00000567188 UBN2Q6ZU65 1347 aa6.67□□□□□ -1.34
CNOT1-211ENST00000567188 AHDC1Q5TGY3 1603 aaPredicted RBP6.67□□□□□ -1.34
CNOT1-211ENST00000567188 IFIT3O14879 490 aaKnown RBP6.67□□□□□ -1.34
CNOT1-211ENST00000567188 ATP5DP30049 168 aa6.67□□□□□ -1.34
CNOT1-211ENST00000567188 NLGN1Q8N2Q7 840 aa6.67□□□□□ -1.34
CNOT1-211ENST00000567188 INTS4Q96HW7 963 aaKnown RBP6.67□□□□□ -1.34
CNOT1-211ENST00000567188 ECHDC1Q9NTX5 307 aa6.67□□□□□ -1.34
CNOT1-211ENST00000567188 PKD2L1Q9P0L9 805 aa6.67□□□□□ -1.34
CNOT1-211ENST00000567188 HNRNPH2P55795 449 aaKnown RBP6.67□□□□□ -1.34
CNOT1-211ENST00000567188 SMC1BQ8NDV3 1235 aa6.67□□□□□ -1.34
CNOT1-211ENST00000567188 CCDC68Q9H2F9 335 aa6.67□□□□□ -1.34
CNOT1-211ENST00000567188 NARFQ9UHQ1 456 aa6.67□□□□□ -1.34
CNOT1-211ENST00000567188 CTAGE9A4FU28 777 aa6.67□□□□□ -1.34
CNOT1-211ENST00000567188 CCDC160A6NGH7 325 aa6.67□□□□□ -1.34
CNOT1-211ENST00000567188 PCCAP05165 728 aaPredicted RBP6.67□□□□□ -1.34
CNOT1-211ENST00000567188 ZNF76P36508 570 aa6.67□□□□□ -1.34
CNOT1-211ENST00000567188 RASSF2P50749 326 aa6.67□□□□□ -1.34
CNOT1-211ENST00000567188 BLVRAP53004 296 aa6.67□□□□□ -1.34
CNOT1-211ENST00000567188 PDE1AP54750 535 aa6.67□□□□□ -1.34
CNOT1-211ENST00000567188 SPAG1Q07617 926 aa6.67□□□□□ -1.34
CNOT1-211ENST00000567188 SEPT2Q15019 361 aa6.67□□□□□ -1.34
CNOT1-211ENST00000567188 IFI16Q16666 785 aaKnown RBP6.67□□□□□ -1.34
CNOT1-211ENST00000567188 TMEM67Q5HYA8 995 aa6.67□□□□□ -1.34
CNOT1-211ENST00000567188 FAM177A1Q8N128 213 aaPredicted RBP6.67□□□□□ -1.34
CNOT1-211ENST00000567188 CCDC77Q9BR77 488 aa6.67□□□□□ -1.34
CNOT1-211ENST00000567188 DDX41Q9UJV9 622 aaKnown RBP6.67□□□□□ -1.34
CNOT1-211ENST00000567188 NPR1P16066 1061 aa6.67□□□□□ -1.34
CNOT1-211ENST00000567188 MRPS9P82933 396 aaKnown RBP6.67□□□□□ -1.34
CNOT1-211ENST00000567188 RUFY4Q6ZNE9 571 aa6.67□□□□□ -1.34
CNOT1-211ENST00000567188 USP44Q9H0E7 712 aa6.67□□□□□ -1.34
CNOT1-211ENST00000567188 COMMD10Q9Y6G5 202 aa6.67□□□□□ -1.34
CNOT1-211ENST00000567188 ABCC4O15439 1325 aa6.67□□□□□ -1.34
CNOT1-211ENST00000567188 CETN3O15182 167 aa6.66□□□□□ -1.34
CNOT1-211ENST00000567188 SEC24BO95487 1268 aa6.66□□□□□ -1.34
CNOT1-211ENST00000567188 GCFC2P16383 781 aaKnown RBP6.66□□□□□ -1.34
CNOT1-211ENST00000567188 C8orf34Q49A92 452 aa6.66□□□□□ -1.34
CNOT1-211ENST00000567188 PPP4R3AQ6IN85 833 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms