RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 AATFQ9NY61 560 aaKnown RBP eCLIP19.13■□□□□ 0.65
CMTM3-213ENST00000566756 GGA1Q9UJY5 639 aa19.13■□□□□ 0.65
CMTM3-213ENST00000566756 KCNJ14Q9UNX9 436 aa19.13■□□□□ 0.65
CMTM3-213ENST00000566756 COL11A2P13942 1736 aaPredicted RBP19.12■□□□□ 0.65
CMTM3-213ENST00000566756 DUOX1Q9NRD9 1551 aa19.12■□□□□ 0.65
CMTM3-213ENST00000566756 UBE2Q2LH0YL09 131 aa19.12■□□□□ 0.65
CMTM3-213ENST00000566756 POLR2DO15514 142 aaKnown RBP19.12■□□□□ 0.65
CMTM3-213ENST00000566756 ACTN4O43707 911 aaKnown RBP19.12■□□□□ 0.65
CMTM3-213ENST00000566756 STX10O60499 249 aa19.12■□□□□ 0.65
CMTM3-213ENST00000566756 ALDH1B1P30837 517 aa19.12■□□□□ 0.65
CMTM3-213ENST00000566756 PDE4BQ07343 736 aa19.12■□□□□ 0.65
CMTM3-213ENST00000566756 RRP12Q5JTH9 1297 aaKnown RBP19.12■□□□□ 0.65
CMTM3-213ENST00000566756 TRIM65Q6PJ69 517 aa19.12■□□□□ 0.65
CMTM3-213ENST00000566756 TMEM139Q8IV31 216 aa19.12■□□□□ 0.65
CMTM3-213ENST00000566756 PRDM10Q9NQV6 1147 aa19.12■□□□□ 0.65
CMTM3-213ENST00000566756 INTS13Q9NVM9 706 aa19.12■□□□□ 0.65
CMTM3-213ENST00000566756 KIF20AO95235 890 aa19.12■□□□□ 0.65
CMTM3-213ENST00000566756 ELF2Q15723 593 aa19.12■□□□□ 0.65
CMTM3-213ENST00000566756 SPTY2D1Q68D10 685 aaPredicted RBP19.12■□□□□ 0.65
CMTM3-213ENST00000566756 HOMER1Q86YM7 354 aa19.12■□□□□ 0.65
CMTM3-213ENST00000566756 REXO1L1PQ8IX06 675 aa19.12■□□□□ 0.65
CMTM3-213ENST00000566756 WDR66Q8TBY9 1149 aa19.12■□□□□ 0.65
CMTM3-213ENST00000566756 NSUN4Q96CB9 384 aaKnown RBP19.12■□□□□ 0.65
CMTM3-213ENST00000566756 RBM28Q9NW13 759 aaKnown RBP19.12■□□□□ 0.65
CMTM3-213ENST00000566756 SERTAD1Q9UHV2 236 aa19.12■□□□□ 0.65
CMTM3-213ENST00000566756 PCDHB6Q9Y5E3 794 aa19.12■□□□□ 0.65
CMTM3-213ENST00000566756 DLEC1Q9Y238 1755 aa19.11■□□□□ 0.65
CMTM3-213ENST00000566756 PRPF3O43395 683 aaKnown RBP19.11■□□□□ 0.65
CMTM3-213ENST00000566756 FGRP09769 529 aa19.11■□□□□ 0.65
CMTM3-213ENST00000566756 H2AFXP16104 143 aaPredicted RBP19.11■□□□□ 0.65
CMTM3-213ENST00000566756 SPECC1LQ69YQ0 1117 aa19.11■□□□□ 0.65
CMTM3-213ENST00000566756 FBXO38Q6PIJ6 1188 aa19.11■□□□□ 0.65
CMTM3-213ENST00000566756 RIOK1Q9BRS2 568 aaKnown RBP19.11■□□□□ 0.65
CMTM3-213ENST00000566756 TOMM22Q9NS69 142 aa19.11■□□□□ 0.65
CMTM3-213ENST00000566756 ATP6V0A2Q9Y487 856 aa19.11■□□□□ 0.65
CMTM3-213ENST00000566756 MYH6P13533 1939 aa19.11■□□□□ 0.65
CMTM3-213ENST00000566756 MAGEB6P1A0A0J9YX57 407 aa19.1■□□□□ 0.65
CMTM3-213ENST00000566756 PPEF1O14829 653 aaPredicted RBP19.1■□□□□ 0.65
CMTM3-213ENST00000566756 UFL1O94874 794 aa19.1■□□□□ 0.65
CMTM3-213ENST00000566756 CALM1P0DP23 149 aa19.1■□□□□ 0.65
CMTM3-213ENST00000566756 CALM2P0DP24 149 aa19.1■□□□□ 0.65
CMTM3-213ENST00000566756 CALM3P0DP25 149 aa19.1■□□□□ 0.65
CMTM3-213ENST00000566756 PLCD1P51178 756 aa19.1■□□□□ 0.65
CMTM3-213ENST00000566756 AKAP17AQ02040 695 aaKnown RBP19.1■□□□□ 0.65
CMTM3-213ENST00000566756 ADGRA1Q86SQ6 560 aa19.1■□□□□ 0.65
CMTM3-213ENST00000566756 KRT222Q8N1A0 295 aa19.1■□□□□ 0.65
CMTM3-213ENST00000566756 ZNF384Q8TF68 577 aa19.1■□□□□ 0.65
CMTM3-213ENST00000566756 NFE2L3Q9Y4A8 694 aa19.1■□□□□ 0.65
CMTM3-213ENST00000566756 TRIM75PA6NK02 468 aa19.1■□□□□ 0.65
CMTM3-213ENST00000566756 FOXN1O15353 648 aa19.1■□□□□ 0.65
CMTM3-213ENST00000566756 TNKSO95271 1327 aa19.1■□□□□ 0.65
CMTM3-213ENST00000566756 BAG6P46379 1132 aa19.1■□□□□ 0.65
CMTM3-213ENST00000566756 FAM193AP78312 1265 aa19.1■□□□□ 0.65
CMTM3-213ENST00000566756 FERMT2Q96AC1 680 aa19.1■□□□□ 0.65
CMTM3-213ENST00000566756 MASTLQ96GX5 879 aa19.1■□□□□ 0.65
CMTM3-213ENST00000566756 ZKSCAN3Q9BRR0 538 aa19.1■□□□□ 0.65
CMTM3-213ENST00000566756 PHF20Q9BVI0 1012 aa19.1■□□□□ 0.65
CMTM3-213ENST00000566756 TMEM232C9JQI7 657 aa19.09■□□□□ 0.65
CMTM3-213ENST00000566756 IL1R1P14778 569 aa19.09■□□□□ 0.65
CMTM3-213ENST00000566756 MECOMQ03112 1051 aa19.09■□□□□ 0.65
CMTM3-213ENST00000566756 GRIN1Q05586 938 aa19.09■□□□□ 0.65
CMTM3-213ENST00000566756 FUT2Q10981 343 aa19.09■□□□□ 0.65
CMTM3-213ENST00000566756 NR5A1Q13285 461 aa19.09■□□□□ 0.65
CMTM3-213ENST00000566756 SLC51AQ86UW1 340 aa19.09■□□□□ 0.65
CMTM3-213ENST00000566756 TBC1D16Q8TBP0 767 aa19.09■□□□□ 0.65
CMTM3-213ENST00000566756 DNAI1Q9UI46 699 aa19.09■□□□□ 0.65
CMTM3-213ENST00000566756 TPM1P09493 284 aa19.08■□□□□ 0.65
CMTM3-213ENST00000566756 KRT2P35908 639 aa19.08■□□□□ 0.65
CMTM3-213ENST00000566756 SF3B2Q13435 895 aaKnown RBP19.08■□□□□ 0.65
CMTM3-213ENST00000566756 SH3RF1Q7Z6J0 888 aa19.08■□□□□ 0.65
CMTM3-213ENST00000566756 MIGA1Q8NAN2 632 aa19.08■□□□□ 0.65
CMTM3-213ENST00000566756 BAG1Q99933 345 aaPredicted RBP19.08■□□□□ 0.65
CMTM3-213ENST00000566756 CD209Q9NNX6 404 aa19.08■□□□□ 0.65
CMTM3-213ENST00000566756 PRR29P0C7W0 189 aa19.08■□□□□ 0.64
CMTM3-213ENST00000566756 FMR1Q06787 632 aaKnown RBP eCLIP19.08■□□□□ 0.64
CMTM3-213ENST00000566756 SPECC1Q5M775 1068 aa19.08■□□□□ 0.64
CMTM3-213ENST00000566756 NUP133Q8WUM0 1156 aa19.08■□□□□ 0.64
CMTM3-213ENST00000566756 ZSCAN10Q96SZ4 725 aaPredicted RBP19.08■□□□□ 0.64
CMTM3-213ENST00000566756 CSRNP2Q9H175 543 aa19.08■□□□□ 0.64
CMTM3-213ENST00000566756 CABP5Q9NP86 173 aa19.08■□□□□ 0.64
CMTM3-213ENST00000566756 POLLQ9UGP5 575 aa19.08■□□□□ 0.64
CMTM3-213ENST00000566756 PPP2R2CQ9Y2T4 447 aa19.08■□□□□ 0.64
CMTM3-213ENST00000566756 A0A1B0GTH6 734 aa19.07■□□□□ 0.64
CMTM3-213ENST00000566756 DDAH1O94760 285 aa19.07■□□□□ 0.64
CMTM3-213ENST00000566756 SLFN14P0C7P3 912 aa19.07■□□□□ 0.64
CMTM3-213ENST00000566756 CDK11BP21127 795 aaKnown RBP19.07■□□□□ 0.64
CMTM3-213ENST00000566756 PRDX5P30044 214 aa19.07■□□□□ 0.64
CMTM3-213ENST00000566756 NR1I3Q14994 352 aa19.07■□□□□ 0.64
CMTM3-213ENST00000566756 PKN1Q16512 942 aa19.07■□□□□ 0.64
CMTM3-213ENST00000566756 MSL1Q68DK7 614 aa19.07■□□□□ 0.64
CMTM3-213ENST00000566756 CATIPQ7Z7H3 387 aa19.07■□□□□ 0.64
CMTM3-213ENST00000566756 TC2NQ8N9U0 490 aa19.07■□□□□ 0.64
CMTM3-213ENST00000566756 OXER1Q8TDS5 423 aa19.07■□□□□ 0.64
CMTM3-213ENST00000566756 BRMS1Q9HCU9 246 aa19.07■□□□□ 0.64
CMTM3-213ENST00000566756 ENAHQ8N8S7 591 aaPredicted RBP19.06■□□□□ 0.64
CMTM3-213ENST00000566756 PYM1Q9BRP8 204 aaKnown RBP19.06■□□□□ 0.64
CMTM3-213ENST00000566756 VWA3AA6NCI4 1184 aa19.06■□□□□ 0.64
CMTM3-213ENST00000566756 NT5C2P49902 561 aa19.06■□□□□ 0.64
CMTM3-213ENST00000566756 IQCA1Q86XH1 822 aa19.06■□□□□ 0.64
CMTM3-213ENST00000566756 CREBRFQ8IUR6 639 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms